| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241250
Identifier: 148241250
GI number: 148241250
Start: 146944
End: 147114
Strand: Direct
Name: 148241250
Synonym: SynRCC307_0151
Alternate gene names: NA
Gene position: 146944-147114 (Clockwise)
Preceding gene: 148241249
Following gene: 148241253
Centisome position: 6.6
GC content: 47.95
Gene sequence:
>171_bases TTGAGTCCTATGGATGCTTTTCTTGATCTCACCAAGGACATCTGGGATTTTCTGCGCGTTCGTAAGAAGTATTGGCTGGC CCCATTGATCATCACCATCGTGTTGATGGGCGCGCTGATTGTGTTTACCCAAGGCTCCGTTGTGGCGCCTTTTATTTACT CGATCTTCTGA
Upstream 100 bases:
>100_bases ACCCACTGCGTCGACGCAGCCAGCAACTGACCACTTACCGGGAAAAGCGCCACACAGCTGGCATTAATCTGACGCGCATC TTTTAACGCTTTAGCGCTGG
Downstream 100 bases:
>100_bases TCATTGCCTTCGCTGGCCTGGGTGAGTGCCTGGGCCACACAGTTATAAATTATCCGAGAGCCGGCCTCATTTTGATGGCC GTCTTTGTCGTAGAAATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MSPMDAFLDLTKDIWDFLRVRKKYWLAPLIITIVLMGALIVFTQGSVVAPFIYSIF
Sequences:
>Translated_56_residues MSPMDAFLDLTKDIWDFLRVRKKYWLAPLIITIVLMGALIVFTQGSVVAPFIYSIF >Mature_55_residues SPMDAFLDLTKDIWDFLRVRKKYWLAPLIITIVLMGALIVFTQGSVVAPFIYSIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6466; Mature: 6335
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPMDAFLDLTKDIWDFLRVRKKYWLAPLIITIVLMGALIVFTQGSVVAPFIYSIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC >Mature Secondary Structure SPMDAFLDLTKDIWDFLRVRKKYWLAPLIITIVLMGALIVFTQGSVVAPFIYSIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA