| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148241253
Identifier: 148241253
GI number: 148241253
Start: 149727
End: 150134
Strand: Direct
Name: 148241253
Synonym: SynRCC307_0154
Alternate gene names: NA
Gene position: 149727-150134 (Clockwise)
Preceding gene: 148241250
Following gene: 148241254
Centisome position: 6.73
GC content: 62.5
Gene sequence:
>408_bases ATGAATGCCGCTGAGCAGGCCCGCAGCGTTGAGTTGGCTCAGCTCATTGCTTCGGCGCTGAATCAGTTCCGGCAGCGCTT CCCAGAGCTCAAGCCGAACCTGCGGCCTTGGCGCGATGACCCCCAGACCCGCGCCTTTGCTGAAGGCAGCTCATTGGATC TGGCCTTTCATCTCCCCGGCTGGAGCCCGCGCTGGCAATGCCGCAGCCTGTTGGTGCAGCTTCGTTTGGCTGATGCCGAG CAGCCACGCCTGATGGGGATGCTGATCAGTGGCATGACCTTTCAAGGCGAACAGTGGCGACTCGCCACCGTGGGGCCTTG GAGCGTGAGCGGTGAACGCGTGCCAGATGAAGCGATTTGCACTCAGCTTCAGCAGGTGTGCCGCGAACTGGTTGGACCGC TGCCGTAA
Upstream 100 bases:
>100_bases GCCGCCGTTGCTGGGGGGTGTGAGCTTCTCGTAACTAACCATGGGATGCGCAAGCCGGAGGTTGTCGGCATCGTGAGCCT AGAGATTGACCTGCGCTGTC
Downstream 100 bases:
>100_bases CCCTTCGCAACCAGATTGCCCCTGATCCCAGTCATGGCGCTTACGTTGGAAAACTGTTAACCGCGCCTGGCCCCATGGCT GTTGCCCTCGCTGCCCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPGWSPRWQCRSLLVQLRLADAE QPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAICTQLQQVCRELVGPLP
Sequences:
>Translated_135_residues MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPGWSPRWQCRSLLVQLRLADAE QPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAICTQLQQVCRELVGPLP >Mature_135_residues MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPGWSPRWQCRSLLVQLRLADAE QPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAICTQLQQVCRELVGPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15268; Mature: 15268
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCC WSPRWQCRSLLVQLRLADAEQPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAIC CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHH TQLQQVCRELVGPLP HHHHHHHHHHHCCCC >Mature Secondary Structure MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCC WSPRWQCRSLLVQLRLADAEQPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAIC CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHH TQLQQVCRELVGPLP HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA