| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241249
Identifier: 148241249
GI number: 148241249
Start: 146528
End: 146929
Strand: Direct
Name: 148241249
Synonym: SynRCC307_0150
Alternate gene names: NA
Gene position: 146528-146929 (Clockwise)
Preceding gene: 148241248
Following gene: 148241250
Centisome position: 6.59
GC content: 58.96
Gene sequence:
>402_bases TTGACCCCTATGGCCACTTCACCCACCACCAAGCAGCTGCGCGAGTTCGGTCTGCTGCTCGCCATTGCCTTCCCGCTCCT GTTGGGATGGCTCCTGCCTGCCTTGCGCGGCCACGGCTTTCACTCCTGGACCCTCTGGATTGCGATCCCAGCACTCAGCT TGGGTTTAATCGCTCCGCGCACCCTGCGGCAGCCCTACCAATGGTGGATGGCCTTGGGCCATGCCCTGGGTTGGTTCAAC AGCCACATCATTCTTGGCGCCGTGTTTTTGCTTGTGTTGCAACCAATTGCATTGGTGATGCGCCTGACGGGCTATGACCC ACTGCGTCGACGCAGCCAGCAACTGACCACTTACCGGGAAAAGCGCCACACAGCTGGCATTAATCTGACGCGCATCTTTT AA
Upstream 100 bases:
>100_bases CCGAGATGGATGTCTTGGTGCTGGAAAATCAGCTGCTGCTGAAAGAAGAGCAACCAGCTGAAGAGCGCGATGAGCGCTGG ATGCAGGAGTTTGAACTCGA
Downstream 100 bases:
>100_bases CGCTTTAGCGCTGGTTGAGTCCTATGGATGCTTTTCTTGATCTCACCAAGGACATCTGGGATTTTCTGCGCGTTCGTAAG AAGTATTGGCTGGCCCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTPMATSPTTKQLREFGLLLAIAFPLLLGWLLPALRGHGFHSWTLWIAIPALSLGLIAPRTLRQPYQWWMALGHALGWFN SHIILGAVFLLVLQPIALVMRLTGYDPLRRRSQQLTTYREKRHTAGINLTRIF
Sequences:
>Translated_133_residues MTPMATSPTTKQLREFGLLLAIAFPLLLGWLLPALRGHGFHSWTLWIAIPALSLGLIAPRTLRQPYQWWMALGHALGWFN SHIILGAVFLLVLQPIALVMRLTGYDPLRRRSQQLTTYREKRHTAGINLTRIF >Mature_132_residues TPMATSPTTKQLREFGLLLAIAFPLLLGWLLPALRGHGFHSWTLWIAIPALSLGLIAPRTLRQPYQWWMALGHALGWFNS HIILGAVFLLVLQPIALVMRLTGYDPLRRRSQQLTTYREKRHTAGINLTRIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15166; Mature: 15035
Theoretical pI: Translated: 12.27; Mature: 12.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPMATSPTTKQLREFGLLLAIAFPLLLGWLLPALRGHGFHSWTLWIAIPALSLGLIAPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH TLRQPYQWWMALGHALGWFNSHIILGAVFLLVLQPIALVMRLTGYDPLRRRSQQLTTYRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KRHTAGINLTRIF HHHHCCCEEEECC >Mature Secondary Structure TPMATSPTTKQLREFGLLLAIAFPLLLGWLLPALRGHGFHSWTLWIAIPALSLGLIAPR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH TLRQPYQWWMALGHALGWFNSHIILGAVFLLVLQPIALVMRLTGYDPLRRRSQQLTTYRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KRHTAGINLTRIF HHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA