| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is mreB [H]
Identifier: 148241208
GI number: 148241208
Start: 106210
End: 107271
Strand: Direct
Name: mreB [H]
Synonym: SynRCC307_0109
Alternate gene names: 148241208
Gene position: 106210-107271 (Clockwise)
Preceding gene: 148241206
Following gene: 148241209
Centisome position: 4.77
GC content: 61.49
Gene sequence:
>1062_bases ATGGCTTGGCATCTCATGTTTTGGCGTCGTTTTCAGCTTTCCCGCGATATCGGGATTGACCTGGGCACCGCCAACACCCT GATCTATGCCACAGGCAAGGGGATCGTGTTGCGTGAACCGTCGGTGGTTGCCATCGACCTCGACAAAGGCGTTCCTTTGG CGGTTGGCGAAGAAGCCAAATTGATGCTCGGCCGCACGCCGGGAAACATCCGTGCGGTGCGTCCCCTGCGCGACGGCGTC ATTGCTGACTTTGATGCTGCTGAGCAGATGATCAAGTACTTCATCCAGAAGGGGAATGAAGGCCGCGGCATGGTGGCCCC CCGCTTGGTGATCGGCATCCCCAGTGGCGTCACCGGTGTGGAACGCCGTGCTGTGCGCGAAGCCGGTTTGGGCGGCGCCC GGGAAGTGCATTTGATTGATGAACCGGTGGCTGCTGCTATCGGTGCCGGTCTGCCGGTGACCGAACCCGTTGGCTCGATG ATTGTTGACATCGGCGGTGGCACCACCGAGGTGGCTGTGCTCAGCCTCCAAGGCACTGTGATCTCTGAATCGGTGCGCGT CGCCGGTGATGAACTCAGCGACTCAATCACCAGCTACCTGAAAAAGGTCCACAACCTGGTGGTGGGTGAGCGCACCGCTG AAGAGATCAAGATCCGCATCGGCTCGGCCTTCCCCGACGATGAGTTCGATCAGACCGCCATGGATGTGCGTGGTCTGCAC CTGCTCTCTGGTTTGCCCCGCACCATCAACGTGCGCGCTGGCGATATCCGCGAAGCCATGATCGAGCCGCTCAACGTGAT CGTTGAGGCGGTGAAGCGCACCTTGGAGCGCACTCCCCCTGAACTGGCTGCTGACATCGTTGACCGCGGCATCATGCTGG CCGGCGGCGGCGCGCTGGTCCGCGGCATCAGTGACCTGGTGAGCAATGAAACCGGGATCCTCACCCACGTGGCGGAAGAC CCGCTGCTGTGTGTGGTGAATGGCTGCGGCCGTGTGCTGGAGGACTTCAAGCGCCTGGGCCGTGTGCTGGATGCCTCCGA GTTCAGCCGTTTGGCCAACTAA
Upstream 100 bases:
>100_bases GGTAGGGGCGCCTATCCCCAGTGGTTCCACCGCTGCGTCCGGTTGTTGCATGTCAGTACCCAAACAGCATTGAAAATCAC ATCTATGATTCGCCGGCTTA
Downstream 100 bases:
>100_bases GCCATGGCGATGGGTCGGCGGCTGTCGCGCCTGCTGGATCGGTCTTTATTGCTGAGCACAGGGCCTTGGCTGGTTCTGCT GCTCTTCTTTTTGGTGGTGC
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MAWHLMFWRRFQLSRDIGIDLGTANTLIYATGKGIVLREPSVVAIDLDKGVPLAVGEEAKLMLGRTPGNIRAVRPLRDGV IADFDAAEQMIKYFIQKGNEGRGMVAPRLVIGIPSGVTGVERRAVREAGLGGAREVHLIDEPVAAAIGAGLPVTEPVGSM IVDIGGGTTEVAVLSLQGTVISESVRVAGDELSDSITSYLKKVHNLVVGERTAEEIKIRIGSAFPDDEFDQTAMDVRGLH LLSGLPRTINVRAGDIREAMIEPLNVIVEAVKRTLERTPPELAADIVDRGIMLAGGGALVRGISDLVSNETGILTHVAED PLLCVVNGCGRVLEDFKRLGRVLDASEFSRLAN
Sequences:
>Translated_353_residues MAWHLMFWRRFQLSRDIGIDLGTANTLIYATGKGIVLREPSVVAIDLDKGVPLAVGEEAKLMLGRTPGNIRAVRPLRDGV IADFDAAEQMIKYFIQKGNEGRGMVAPRLVIGIPSGVTGVERRAVREAGLGGAREVHLIDEPVAAAIGAGLPVTEPVGSM IVDIGGGTTEVAVLSLQGTVISESVRVAGDELSDSITSYLKKVHNLVVGERTAEEIKIRIGSAFPDDEFDQTAMDVRGLH LLSGLPRTINVRAGDIREAMIEPLNVIVEAVKRTLERTPPELAADIVDRGIMLAGGGALVRGISDLVSNETGILTHVAED PLLCVVNGCGRVLEDFKRLGRVLDASEFSRLAN >Mature_352_residues AWHLMFWRRFQLSRDIGIDLGTANTLIYATGKGIVLREPSVVAIDLDKGVPLAVGEEAKLMLGRTPGNIRAVRPLRDGVI ADFDAAEQMIKYFIQKGNEGRGMVAPRLVIGIPSGVTGVERRAVREAGLGGAREVHLIDEPVAAAIGAGLPVTEPVGSMI VDIGGGTTEVAVLSLQGTVISESVRVAGDELSDSITSYLKKVHNLVVGERTAEEIKIRIGSAFPDDEFDQTAMDVRGLHL LSGLPRTINVRAGDIREAMIEPLNVIVEAVKRTLERTPPELAADIVDRGIMLAGGGALVRGISDLVSNETGILTHVAEDP LLCVVNGCGRVLEDFKRLGRVLDASEFSRLAN
Specific function: Involved in formation of the rod shape of the cell [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI87082236, Length=331, Percent_Identity=55.5891238670695, Blast_Score=336, Evalue=1e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 37704; Mature: 37573
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWHLMFWRRFQLSRDIGIDLGTANTLIYATGKGIVLREPSVVAIDLDKGVPLAVGEEAK CCCHHHHHHHHHHCCCCCCEECCCCEEEEECCCEEEEECCCEEEEECCCCCCEEECCCCE LMLGRTPGNIRAVRPLRDGVIADFDAAEQMIKYFIQKGNEGRGMVAPRLVIGIPSGVTGV EEEECCCCCCEEECHHHCCCEECHHHHHHHHHHHHHCCCCCCCEECCEEEEECCCCCCHH ERRAVREAGLGGAREVHLIDEPVAAAIGAGLPVTEPVGSMIVDIGGGTTEVAVLSLQGTV HHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCE ISESVRVAGDELSDSITSYLKKVHNLVVGERTAEEIKIRIGSAFPDDEFDQTAMDVRGLH EHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHH LLSGLPRTINVRAGDIREAMIEPLNVIVEAVKRTLERTPPELAADIVDRGIMLAGGGALV HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHH RGISDLVSNETGILTHVAEDPLLCVVNGCGRVLEDFKRLGRVLDASEFSRLAN HHHHHHHCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHCC >Mature Secondary Structure AWHLMFWRRFQLSRDIGIDLGTANTLIYATGKGIVLREPSVVAIDLDKGVPLAVGEEAK CCHHHHHHHHHHCCCCCCEECCCCEEEEECCCEEEEECCCEEEEECCCCCCEEECCCCE LMLGRTPGNIRAVRPLRDGVIADFDAAEQMIKYFIQKGNEGRGMVAPRLVIGIPSGVTGV EEEECCCCCCEEECHHHCCCEECHHHHHHHHHHHHHCCCCCCCEECCEEEEECCCCCCHH ERRAVREAGLGGAREVHLIDEPVAAAIGAGLPVTEPVGSMIVDIGGGTTEVAVLSLQGTV HHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCE ISESVRVAGDELSDSITSYLKKVHNLVVGERTAEEIKIRIGSAFPDDEFDQTAMDVRGLH EHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHH LLSGLPRTINVRAGDIREAMIEPLNVIVEAVKRTLERTPPELAADIVDRGIMLAGGGALV HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHH RGISDLVSNETGILTHVAEDPLLCVVNGCGRVLEDFKRLGRVLDASEFSRLAN HHHHHHHCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377; 8387996 [H]