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The map label for this gene is apl [H]

Identifier: 148241206

GI number: 148241206

Start: 105034

End: 105693

Strand: Direct

Name: apl [H]

Synonym: SynRCC307_0107

Alternate gene names: 148241206

Gene position: 105034-105693 (Clockwise)

Preceding gene: 148241205

Following gene: 148241208

Centisome position: 4.72

GC content: 59.85

Gene sequence:

>660_bases
ATGGGGCTCACTGAGCTGGTCACCCAACTACCGGAGCTCATCGGTCAGGCCGTTGAAGCCAATCAGTGGTTGGGTTACAC
CGCCATCGGGGCGGCCATGTTTTTGGAAAATCTGTTTCCGCCGATCCCCTCAGAGCTGATCATGCCTCTGGGGGGGTTTT
ATGTGCAGCAGGGTCAGCTGAGCTTCATCCCTGTGGTGTTGGCGGGCTTGATCGGCACGGTGATCGGCACCCTGCCTTGG
TATGGCATCGGCCGATTGATCAATGAAGAGCGCATTGAGCACTGGCTTGAGCGCCATGGCCGCTGGATTGGCATCAGCCC
TGCTGATTTGGTGCGCAGCCGCAAATGGTTCAGCCGTTACGGCACCTTGCTGGTGTTCTGGGGTCGCTTGCTGCCCGGGA
TTCGCACGCTGATCTCGGTGCCCGCGGGAATTGAGTTGATGCCGTTTGTGCCGTTTCTGCTGTGGACAACGGCCGGAAGC
TTGATTTGGACATTGCTACTCACCTTGGCGGGCTTTGCACTCGGTGAGGGCTACAGCAACGTTGAGGTCTGGATCGAGCC
AGTCTCCAAGGTCATCAAAGTGGGCCTGGTGGTGGCCGCCGTTGCGGTGGCGGTGTGGCTGGGCTTGCGCATTTGGCGTC
GCCGCCACACCGCCGATTGA

Upstream 100 bases:

>100_bases
TCAACGTGCCGGTGGAAGGCCCTTACAAGGTGGATCACTACCGCTACTGATTGGGCTGAACCCATGGAAGACTTGCGCGG
TTTCACATCGCGCAGGCTCC

Downstream 100 bases:

>100_bases
GCTCAGAACGGCACGTCGTCGTCGCTCGCGCCGCCGCCAAAGTTGGCGTTCTGCTCGCTATCGCGCCTGGAGCCGAGCAG
TTCGAGCCGATCAACGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MGLTELVTQLPELIGQAVEANQWLGYTAIGAAMFLENLFPPIPSELIMPLGGFYVQQGQLSFIPVVLAGLIGTVIGTLPW
YGIGRLINEERIEHWLERHGRWIGISPADLVRSRKWFSRYGTLLVFWGRLLPGIRTLISVPAGIELMPFVPFLLWTTAGS
LIWTLLLTLAGFALGEGYSNVEVWIEPVSKVIKVGLVVAAVAVAVWLGLRIWRRRHTAD

Sequences:

>Translated_219_residues
MGLTELVTQLPELIGQAVEANQWLGYTAIGAAMFLENLFPPIPSELIMPLGGFYVQQGQLSFIPVVLAGLIGTVIGTLPW
YGIGRLINEERIEHWLERHGRWIGISPADLVRSRKWFSRYGTLLVFWGRLLPGIRTLISVPAGIELMPFVPFLLWTTAGS
LIWTLLLTLAGFALGEGYSNVEVWIEPVSKVIKVGLVVAAVAVAVWLGLRIWRRRHTAD
>Mature_218_residues
GLTELVTQLPELIGQAVEANQWLGYTAIGAAMFLENLFPPIPSELIMPLGGFYVQQGQLSFIPVVLAGLIGTVIGTLPWY
GIGRLINEERIEHWLERHGRWIGISPADLVRSRKWFSRYGTLLVFWGRLLPGIRTLISVPAGIELMPFVPFLLWTTAGSL
IWTLLLTLAGFALGEGYSNVEVWIEPVSKVIKVGLVVAAVAVAVWLGLRIWRRRHTAD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24325; Mature: 24194

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTELVTQLPELIGQAVEANQWLGYTAIGAAMFLENLFPPIPSELIMPLGGFYVQQGQL
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHCCCCC
SFIPVVLAGLIGTVIGTLPWYGIGRLINEERIEHWLERHGRWIGISPADLVRSRKWFSRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHH
GTLLVFWGRLLPGIRTLISVPAGIELMPFVPFLLWTTAGSLIWTLLLTLAGFALGEGYSN
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VEVWIEPVSKVIKVGLVVAAVAVAVWLGLRIWRRRHTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GLTELVTQLPELIGQAVEANQWLGYTAIGAAMFLENLFPPIPSELIMPLGGFYVQQGQL
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHCCCCC
SFIPVVLAGLIGTVIGTLPWYGIGRLINEERIEHWLERHGRWIGISPADLVRSRKWFSRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHH
GTLLVFWGRLLPGIRTLISVPAGIELMPFVPFLLWTTAGSLIWTLLLTLAGFALGEGYSN
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VEVWIEPVSKVIKVGLVVAAVAVAVWLGLRIWRRRHTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]