| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is mreC
Identifier: 148241209
GI number: 148241209
Start: 107275
End: 108012
Strand: Direct
Name: mreC
Synonym: SynRCC307_0110
Alternate gene names: NA
Gene position: 107275-108012 (Clockwise)
Preceding gene: 148241208
Following gene: 148241210
Centisome position: 4.82
GC content: 61.11
Gene sequence:
>738_bases ATGGCGATGGGTCGGCGGCTGTCGCGCCTGCTGGATCGGTCTTTATTGCTGAGCACAGGGCCTTGGCTGGTTCTGCTGCT CTTCTTTTTGGTGGTGCGCGTCTCCAAGGGCGCCCCGTTGGCCGATCTTTATGCCCAGCTCAGCCGCCCGTTTTGGCCTG GTTCAGCCCAATCGGAATGGCTCAAAGAGTCCCAGCAATTGGAAGATCAGCAGCGCATTGCCACCCTTGAGGGCCGCTTG GCTCGCCTCGAGCAAGATCAGCAGCTGCGCAATCAAGCCGGTGATTGGATCACCGCTCCTGTGATCAGCCGCCGCATTGA AGGTTGGTGGCAGCAACTGGAATTGGGTGCTGGTCGGGTGCAGGGCATCAAAACCGGTGCGGTCGTCACCGGCCCTGGCG GTGTGTTGGGCCGCATCAGCAGCGTGACTCCGAGCACCTCCAGGGTGCAGTTGCTGACCGATCCCTCCAGCCGCGTGGGC GTCGAGCTTCAAGGCGGCAGAGGCCATGGCCTGCTTTTTGGTGAAGGCTCCAGCCGGCCGCTGGTCAAATTCCTCAATAA CGATGTGACCGTTCAGCCCGGTGATGTGGTGGTCACTTCTAGGGCCAGCTCGGTGTTTCCTGCCAACTTGATCATTGGCG TTGTGCAAAGCGTCAACACCCAAGCCGGACCAGCTCCTCAGGGCTTGGTGCAGCTCTCAGCTCCAGCCGATCAGATCGAT TGGGTGCGGGTGCGCTGA
Upstream 100 bases:
>100_bases GCTGTGTGTGGTGAATGGCTGCGGCCGTGTGCTGGAGGACTTCAAGCGCCTGGGCCGTGTGCTGGATGCCTCCGAGTTCA GCCGTTTGGCCAACTAAGCC
Downstream 100 bases:
>100_bases TGGCTGATCGCTCCTGGTGGCGGCTTCAGGCGTTGATCCTCACCAGCCTGCTGTTGCTGCTGCTAACGATCGCCACCCCG GCTTGGTTGCGGCTCGATGG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MAMGRRLSRLLDRSLLLSTGPWLVLLLFFLVVRVSKGAPLADLYAQLSRPFWPGSAQSEWLKESQQLEDQQRIATLEGRL ARLEQDQQLRNQAGDWITAPVISRRIEGWWQQLELGAGRVQGIKTGAVVTGPGGVLGRISSVTPSTSRVQLLTDPSSRVG VELQGGRGHGLLFGEGSSRPLVKFLNNDVTVQPGDVVVTSRASSVFPANLIIGVVQSVNTQAGPAPQGLVQLSAPADQID WVRVR
Sequences:
>Translated_245_residues MAMGRRLSRLLDRSLLLSTGPWLVLLLFFLVVRVSKGAPLADLYAQLSRPFWPGSAQSEWLKESQQLEDQQRIATLEGRL ARLEQDQQLRNQAGDWITAPVISRRIEGWWQQLELGAGRVQGIKTGAVVTGPGGVLGRISSVTPSTSRVQLLTDPSSRVG VELQGGRGHGLLFGEGSSRPLVKFLNNDVTVQPGDVVVTSRASSVFPANLIIGVVQSVNTQAGPAPQGLVQLSAPADQID WVRVR >Mature_244_residues AMGRRLSRLLDRSLLLSTGPWLVLLLFFLVVRVSKGAPLADLYAQLSRPFWPGSAQSEWLKESQQLEDQQRIATLEGRLA RLEQDQQLRNQAGDWITAPVISRRIEGWWQQLELGAGRVQGIKTGAVVTGPGGVLGRISSVTPSTSRVQLLTDPSSRVGV ELQGGRGHGLLFGEGSSRPLVKFLNNDVTVQPGDVVVTSRASSVFPANLIIGVVQSVNTQAGPAPQGLVQLSAPADQIDW VRVR
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26544; Mature: 26413
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMGRRLSRLLDRSLLLSTGPWLVLLLFFLVVRVSKGAPLADLYAQLSRPFWPGSAQSEW CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHH LKESQQLEDQQRIATLEGRLARLEQDQQLRNQAGDWITAPVISRRIEGWWQQLELGAGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCC QGIKTGAVVTGPGGVLGRISSVTPSTSRVQLLTDPSSRVGVELQGGRGHGLLFGEGSSRP CCEECCEEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCCH LVKFLNNDVTVQPGDVVVTSRASSVFPANLIIGVVQSVNTQAGPAPQGLVQLSAPADQID HHHHHCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC WVRVR EEEEC >Mature Secondary Structure AMGRRLSRLLDRSLLLSTGPWLVLLLFFLVVRVSKGAPLADLYAQLSRPFWPGSAQSEW CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHH LKESQQLEDQQRIATLEGRLARLEQDQQLRNQAGDWITAPVISRRIEGWWQQLELGAGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCC QGIKTGAVVTGPGGVLGRISSVTPSTSRVQLLTDPSSRVGVELQGGRGHGLLFGEGSSRP CCEECCEEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCCH LVKFLNNDVTVQPGDVVVTSRASSVFPANLIIGVVQSVNTQAGPAPQGLVQLSAPADQID HHHHHCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC WVRVR EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA