| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675750
Identifier: 147675750
GI number: 147675750
Start: 491449
End: 492645
Strand: Direct
Name: 147675750
Synonym: VC0395_A0459
Alternate gene names: NA
Gene position: 491449-492645 (Clockwise)
Preceding gene: 147673705
Following gene: 147674852
Centisome position: 16.25
GC content: 47.54
Gene sequence:
>1197_bases ATGGAACCGATTAAACTGACTTCTCTTTTTTCAGCCAGCTTGGTCACGCTGGGTGTGACTTATGCGCCATTAGGGGTTGC GAAGCCAACGCCGAATCCTATCGTGACGGAATCTGGGATGGCGGTAGTGCCGTTTCTTAATCTTTCGACGGGCTATAACG ATAACTTGGCCAAATCAAACCAGCAGCAAGACAGCTCGGCCTTCTCGGTGATTGAATCGGGAGTCGGTTTTATAGTCGAG CCGCAAAGCAGTAAAACCCAATTGGGATACCGTTTTCGCAACGGAACGTATTTTAGTTCTCAACAAGATAACTTTACCGA TCACTACCTTGATCTGACCAGTGATTGGGAATTGAACTCCCGCCACCGCATTGGGTTTGAGTATAACTTAGCCTTAGCCC ATGAAGGCCGTGGCGAGAACGATACGACACTCGGGCTTGATTACAACCAATATGAGAGCCACAGTGCCAATCTTGGGTAT GGTTTTGGTTCAACAGAAGCGATTGGTCGGATTGAAACCAATATCGGTTGGCAAGATTTTACTTATCAAAATAACCGCAC CATTACTCAATATCAGGATTGGGATGAGCTGCGCTTTAACTCCACTTTTTATTATCAGGCATTACCGCGCACCTCGTTTA TCGCGCAAGTGATTGCTAACTCTCGTCGTTATGACCTGATCGCACCGGGAGCCAGCAGCAAAGATAATAATCACTACTTT GGTTATCTCGGTGCTTCTTGGGATGCCACAGGTAAGTTGCGAGGCAACGCAAAGCTTGGTTACCAGCAAAAAGATTTTGA TGCAGCCAGCCGTAAAGACTTTGACTCTTTCTCATGGGATGTGGATGTGACTTATCTGGTTCGCACCTACTCAGCGCTCC AACTGGTGACCAATCGACGTTCGACCGACTCTGATGGCGATGGTGACGCGATTGACGCAGCGACCTATCAAGTCAACTGG TCACACAATTGGAATACCCAATGGACGACTGAAGCCGCATTAACGCGTTTAGAGGAAGACTACACGGCATCGAATCGTGA TGATGAAACGACGAATGCGAGTTTACGTGCCAGCTATGATTTTCGCCGTTGGCTGACCTTTGAGTTGGGTGTAGGACGTG AGCGGAAAGACTCCAATATCGACTCGTTAAGCTATAGTCAAAATGTGTATTACCTGTCTGTTCAGGGCGTGATGTAA
Upstream 100 bases:
>100_bases AAAGGATTTGTTGGAAAAAACGCGTATTAAGACAGGGCACTTGCGTCGTAAGTGCGAGTGCTACTCTTGAATAAATATCG ATTTAAATAAGTGCAGGCAA
Downstream 100 bases:
>100_bases CCCATGATGAAGTACCTACTCTCTTTTTTGCTGTGCCTATTGGTATGGCCGTCATTGGCTGTCGCCAATGACGATTTTTA TCGTCTCGGTGTTGGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSNQQQDSSAFSVIESGVGFIVE PQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGY GFGSTEAIGRIETNIGWQDFTYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAIDAATYQVNW SHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYDFRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM
Sequences:
>Translated_398_residues MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSNQQQDSSAFSVIESGVGFIVE PQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGY GFGSTEAIGRIETNIGWQDFTYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAIDAATYQVNW SHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYDFRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM >Mature_398_residues MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSNQQQDSSAFSVIESGVGFIVE PQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGY GFGSTEAIGRIETNIGWQDFTYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAIDAATYQVNW SHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYDFRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44992; Mature: 44992
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSN CCCEEEHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCHHCCC QQQDSSAFSVIESGVGFIVEPQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNS CCHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCEEECCCCCCCCCEEEECCCCCCCCC RHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGYGFGSTEAIGRIETNIGWQDF CEECCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE TYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF EECCCCEEEEECCCCCEECCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEE GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRR EEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCC STDSDGDGDAIDAATYQVNWSHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYD CCCCCCCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC FRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM EEEEEEEEECCCCCCCCCCCCCEEECCCEEEEEEECCC >Mature Secondary Structure MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSN CCCEEEHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCHHCCC QQQDSSAFSVIESGVGFIVEPQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNS CCHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCEEECCCCCCCCCEEEECCCCCCCCC RHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGYGFGSTEAIGRIETNIGWQDF CEECCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE TYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF EECCCCEEEEECCCCCEECCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEE GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRR EEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCC STDSDGDGDAIDAATYQVNWSHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYD CCCCCCCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC FRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM EEEEEEEEECCCCCCCCCCCCCEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA