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The map label for this gene is yccZ [C]

Identifier: 147674852

GI number: 147674852

Start: 492649

End: 493176

Strand: Direct

Name: yccZ [C]

Synonym: VC0395_A0460

Alternate gene names: 147674852

Gene position: 492649-493176 (Clockwise)

Preceding gene: 147675750

Following gene: 147674262

Centisome position: 16.29

GC content: 46.02

Gene sequence:

>528_bases
ATGATGAAGTACCTACTCTCTTTTTTGCTGTGCCTATTGGTATGGCCGTCATTGGCTGTCGCCAATGACGATTTTTATCG
TCTCGGTGTTGGCGATCAGATCCGTATTCAAGTCTATGACGAGCCCGAACTCTCATTTGAGACGCGGGTGAGTGACAACG
GCAACATTGATTATCCCTTCCTTGGCCGAATTCGCTTGAAAGGTAAAACCTTGGAAGAAGTCAAAACCACGATTCACGAT
GGTTTGCTGGATGGTTATTTGATCAACCCTAATGTCTCCGTCTCGATCTTGGAATACCGTCCTTTCTTTGTGAATGGTCA
GGTAATGAAGCCTGGAAGTTATCCTTATCATCCCGGTTTGACGGTGAACAAAGCGATCACTATTGCAGGTGGGTTTACTG
AGCGTGCCTCAAAAACCAATCTGTTTATCTCCAGTAGTGACGATCCGGAAGCCAAACCGACCAAAGCCACATTGCTGAGT
AAACTTCAACCCGGTGACATACTGACAGTCGCCGAAAGCTTCTTTTAA

Upstream 100 bases:

>100_bases
TGAGTTGGGTGTAGGACGTGAGCGGAAAGACTCCAATATCGACTCGTTAAGCTATAGTCAAAATGTGTATTACCTGTCTG
TTCAGGGCGTGATGTAACCC

Downstream 100 bases:

>100_bases
TTTTAGGGTGTAACGGTACACAAGATGACAGGCAAACAATTCACTCAAGAAGAAGTGATCGATATTCGTCAGTATTTTAA
TGTGCTACTTAACTATAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMKYLLSFLLCLLVWPSLAVANDDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHD
GLLDGYLINPNVSVSILEYRPFFVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLS
KLQPGDILTVAESFF

Sequences:

>Translated_175_residues
MMKYLLSFLLCLLVWPSLAVANDDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHD
GLLDGYLINPNVSVSILEYRPFFVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLS
KLQPGDILTVAESFF
>Mature_175_residues
MMKYLLSFLLCLLVWPSLAVANDDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHD
GLLDGYLINPNVSVSILEYRPFFVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLS
KLQPGDILTVAESFF

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=156, Percent_Identity=34.6153846153846, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1788376, Length=166, Percent_Identity=33.1325301204819, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 19528; Mature: 19528

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYLLSFLLCLLVWPSLAVANDDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPF
CHHHHHHHHHHHHHCCCEEECCCCEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCE
LGRIRLKGKTLEEVKTTIHDGLLDGYLINPNVSVSILEYRPFFVNGQVMKPGSYPYHPGL
EEEEEECCCCHHHHHHHHHHHCCCCEEECCCCEEEEEEECCEEECCEEECCCCCCCCCCC
TVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLSKLQPGDILTVAESFF
EECCEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MMKYLLSFLLCLLVWPSLAVANDDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPF
CHHHHHHHHHHHHHCCCEEECCCCEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCE
LGRIRLKGKTLEEVKTTIHDGLLDGYLINPNVSVSILEYRPFFVNGQVMKPGSYPYHPGL
EEEEEECCCCHHHHHHHHHHHCCCCEEECCCCEEEEEEECCEEECCEEECCCCCCCCCCC
TVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLSKLQPGDILTVAESFF
EECCEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]