| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675397
Identifier: 147675397
GI number: 147675397
Start: 1612118
End: 1612267
Strand: Reverse
Name: 147675397
Synonym: VC0395_A1498
Alternate gene names: NA
Gene position: 1612267-1612118 (Counterclockwise)
Preceding gene: 147674982
Following gene: 147674603
Centisome position: 53.31
GC content: 42.67
Gene sequence:
>150_bases GTGATCCCGACAATTTACTCTGTTGATTATTCCCGTTTTATCATGCAAAAACCGCTTTCCCACGATGAGTTTGAGCGTTG CGTGGCAATTTTTTCACCGAATAAGCAAGGCGCTGAATATTCATTTCACGCTTCTCTCGATAAAGGCTAG
Upstream 100 bases:
>100_bases AAAATGAGCAAAATGGCCACCAGAGCAATGATTAAACCTATATTCATAAAATCCGTATCTTCAGTTTTCAATGGCTAACG ATTAAGGATACACGCTCGTT
Downstream 100 bases:
>100_bases GAATTGTCGCGCTGAAGCGTTATAACTAATAATTATAAAATATGTGTGTCTGTGGCAAAACACCGCAAGGGATTATGGGA AAAAGATGAAACTGCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MIPTIYSVDYSRFIMQKPLSHDEFERCVAIFSPNKQGAEYSFHASLDKG
Sequences:
>Translated_49_residues MIPTIYSVDYSRFIMQKPLSHDEFERCVAIFSPNKQGAEYSFHASLDKG >Mature_49_residues MIPTIYSVDYSRFIMQKPLSHDEFERCVAIFSPNKQGAEYSFHASLDKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5655; Mature: 5655
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTIYSVDYSRFIMQKPLSHDEFERCVAIFSPNKQGAEYSFHASLDKG CCCCCCCCCHHHHHHHCCCCCCCHHHEEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure MIPTIYSVDYSRFIMQKPLSHDEFERCVAIFSPNKQGAEYSFHASLDKG CCCCCCCCCHHHHHHHCCCCCCCHHHEEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA