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The map label for this gene is uidR [C]

Identifier: 147675365

GI number: 147675365

Start: 1434829

End: 1435458

Strand: Reverse

Name: uidR [C]

Synonym: VC0395_A1346

Alternate gene names: 147675365

Gene position: 1435458-1434829 (Counterclockwise)

Preceding gene: 147675699

Following gene: 147674887

Centisome position: 47.47

GC content: 47.78

Gene sequence:

>630_bases
ATGAAACTCAGTGAGCAAAAACGGTTGGCGCTGATTGAAGCAGCAAAAGAAGAGTTTACCCAGTTTGGATTCCATGCAGC
GAATATGGATCGCGTTTGCGAACGCGCAGGTACCTCAAAACGCACCTTGTATCGCCACTTTACCAGTAAAGAGTTGCTCT
TTATTGAAGTGATCAATCTTCTGGTGGCACAGCCGCACAAGGTTGGTTTTGAGTATCAATCTACCCGTTCTCTTGCGGAT
CAGTTGCACGACTACTTTGCGGCAAAAATTGACCTACTGTATCGAACGATTGGCCTTGATGTGCTGCGGATGATTGTGGG
GGAATTTGTGCGCGATCCAGCCTTAACGCAGCAATATCTCGCGTTGATGGGGACTCAAGATACGGCGCTGACTGCGTGGC
TGCAAGCTGCCATTAAGGATGGAAAACTGATTGAGAAAGAAGTGGCTCCCATGGCGACAACCTTGATGAATCTCTTTCAT
GGTCAGTTTTTATGGCCGCAGTTGCTGGCCGCGGTGGAGCTGCCTGATGCCAAACAGCAGCAAATCATGATGGATGAAAT
CATTCGTGTGTTTGTGTTGAGCTACGGTGTATCCTCTCCAAGTCATTTGAGTATAGAACTAAAGCCTTAG

Upstream 100 bases:

>100_bases
TTTTAGCACAAAGTAAACTCGTTGGTGTACTTTTTTGTGCGTCGGACTTATAGTGATAGCGGATGATATTGATAACCGAT
GAAATTGAGGAAATCGTGGT

Downstream 100 bases:

>100_bases
AGGCTAACGGATCACTGATGAGGAGTCTTGCCATGTTACCGACCGATTTTCCATTTTTTCACCAAAGCGCCTTTATTAAT
GGGCAGTGGATTTTAGGTGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcription Regulator Protein; Calsymin Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKLSEQKRLALIEAAKEEFTQFGFHAANMDRVCERAGTSKRTLYRHFTSKELLFIEVINLLVAQPHKVGFEYQSTRSLAD
QLHDYFAAKIDLLYRTIGLDVLRMIVGEFVRDPALTQQYLALMGTQDTALTAWLQAAIKDGKLIEKEVAPMATTLMNLFH
GQFLWPQLLAAVELPDAKQQQIMMDEIIRVFVLSYGVSSPSHLSIELKP

Sequences:

>Translated_209_residues
MKLSEQKRLALIEAAKEEFTQFGFHAANMDRVCERAGTSKRTLYRHFTSKELLFIEVINLLVAQPHKVGFEYQSTRSLAD
QLHDYFAAKIDLLYRTIGLDVLRMIVGEFVRDPALTQQYLALMGTQDTALTAWLQAAIKDGKLIEKEVAPMATTLMNLFH
GQFLWPQLLAAVELPDAKQQQIMMDEIIRVFVLSYGVSSPSHLSIELKP
>Mature_209_residues
MKLSEQKRLALIEAAKEEFTQFGFHAANMDRVCERAGTSKRTLYRHFTSKELLFIEVINLLVAQPHKVGFEYQSTRSLAD
QLHDYFAAKIDLLYRTIGLDVLRMIVGEFVRDPALTQQYLALMGTQDTALTAWLQAAIKDGKLIEKEVAPMATTLMNLFH
GQFLWPQLLAAVELPDAKQQQIMMDEIIRVFVLSYGVSSPSHLSIELKP

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23758; Mature: 23758

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSEQKRLALIEAAKEEFTQFGFHAANMDRVCERAGTSKRTLYRHFTSKELLFIEVINL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
LVAQPHKVGFEYQSTRSLADQLHDYFAAKIDLLYRTIGLDVLRMIVGEFVRDPALTQQYL
HHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALMGTQDTALTAWLQAAIKDGKLIEKEVAPMATTLMNLFHGQFLWPQLLAAVELPDAKQQ
HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHH
QIMMDEIIRVFVLSYGVSSPSHLSIELKP
HHHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MKLSEQKRLALIEAAKEEFTQFGFHAANMDRVCERAGTSKRTLYRHFTSKELLFIEVINL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
LVAQPHKVGFEYQSTRSLADQLHDYFAAKIDLLYRTIGLDVLRMIVGEFVRDPALTQQYL
HHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALMGTQDTALTAWLQAAIKDGKLIEKEVAPMATTLMNLFHGQFLWPQLLAAVELPDAKQQ
HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHH
QIMMDEIIRVFVLSYGVSSPSHLSIELKP
HHHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA