BacMap

Definition	Vibrio cholerae O395 chromosome 2, complete sequence.
Accession	NC_009457
Length	3,024,069

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The map label for this gene is gabD [H]

Identifier: 147674887

GI number: 147674887

Start: 1433345

End: 1434811

Strand: Reverse

Name: gabD [H]

Synonym: VC0395_A1344

Alternate gene names: 147674887

Gene position: 1434811-1433345 (Counterclockwise)

Preceding gene: 147675365

Following gene: 147674301

Centisome position: 47.45

GC content: 50.24

Gene sequence:

>1467_bases
ATGAGGAGTCTTGCCATGTTACCGACCGATTTTCCATTTTTTCACCAAAGCGCCTTTATTAATGGGCAGTGGATTTTAGG
TGAGCCACAGGCAAGGCAAACGGTAACCAATCCGTTTGATGGCTCCCTCATTGGCTCTGTTCCTTTATTGAGTGCGGCTC
AGGTGCAAGAAGCGATTGCCGGTGCGCAAGCGGCGCAAATTTTATGGTGCCAGCAACCCGCTGAAAATAAAGCAAAAATT
TTGCGCCGTTGGTATGAGCTTATTGAACAGCATCATGAATCATTGGCGAAGTTATTAACTATTGAACAAGGTAAACCGCT
GGCAGAAGCCAGAGGAGAAATTCACTACGCCGCCAGTTTTGTTGAATGGTATGCCGAAGAGGCCAAACGTGCATATGGCG
AGCTGATCCCATCCCATAAACCTGATGCGCGAATTATGGTTTCACGTCAGCCTGTTGGCGTTGTTGCCGCGATTACGCCT
TGGAATTTCCCCGCCGCCATGATTACCCGTAAATGTGCCCCTGCCTTTGCAGCTGGTTGCGCTGTGGTTTTAAAACCAGC
GCCGGATACGCCGTTCACGGCTTTAGCTTTGGCCGATCTTGCGCAGCAAGCGGGAATCCCTGATGGTTTATTGCAAGTGG
TGACGGGCGATGCGATTGAAATCGGGCGTGTACTGACGGAAAGCAAAACGGTACGCAAACTCTCATTTACTGGCTCAACC
GGGGTTGGCAAGCTTTTGATGGCACAATCGGCCAATAACGTGAAAAAACTCTCGCTTGAGCTGGGAGGAAATGCGCCGTT
TATTGTGTTCGAAGATGCGGACATTAATGCCGCGATTGATGGTGTGATGGTGGCGAAATTTCGTAATGCTGGACAAACTT
GCGTGTGCGCTAACCGGATTTATGTGCATGACGCGGTATATGATCAATTTGCTGCCAAGTTGGTGGATCGGGTCAGCAGA
CTCAACGTCGGTTATGGTTTGGATGCCGGTGTAAACATCGGTCCGCTGATTAATGATGCCGCGGTTGCTAAAGTCACATC
ACATATAGTGGATGCCCAAAGCAAAGGAGCGAAAGTGATGTTTGGTGCGTTGCCTGAAGCGGGCAGCCGTTTATTCCAGC
CACACGTGTTAACCGAAGTGACCGACGAAATGCGCGTTGCTGACGAAGAAACCTTCGGCCCCTTGGCCGCACTGTTTCGT
TTTAGCTCTGAGCAAGAAGTGATCGAGCGAGCCAATGCGACCGATTCGGGTTTGGCCGCTTATTGTTATACCCAATCTTT
GCGCCGGGCATGGCATATGAGTGAAGCACTTGAAGCGGGGATTGTCGGCATCAACGAAGGGTTGATTTCCACTACGTTAG
CGCCTTTTGGTGGCATCAAAGAGTCGGGTCTTGGTAGAGAAGGGGCGAAACACGGCCTTGAAGAGTACCTTGAAGTCAAA
TATACCCTTATGGGTGGACTAGCTTAG

Upstream 100 bases:

>100_bases
TGATGGATGAAATCATTCGTGTGTTTGTGTTGAGCTACGGTGTATCCTCTCCAAGTCATTTGAGTATAGAACTAAAGCCT
TAGAGGCTAACGGATCACTG

Downstream 100 bases:

>100_bases
GTTTGGGTGTTTGATTGCTCTGCACGTTCAGAGGTAACCATTTCAGCGGGCCATTGGTTTCAAAATCATTGGCGCGCTGA
CAAGAGAGATACACTTCACC

Product: succinate-semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MRSLAMLPTDFPFFHQSAFINGQWILGEPQARQTVTNPFDGSLIGSVPLLSAAQVQEAIAGAQAAQILWCQQPAENKAKI
LRRWYELIEQHHESLAKLLTIEQGKPLAEARGEIHYAASFVEWYAEEAKRAYGELIPSHKPDARIMVSRQPVGVVAAITP
WNFPAAMITRKCAPAFAAGCAVVLKPAPDTPFTALALADLAQQAGIPDGLLQVVTGDAIEIGRVLTESKTVRKLSFTGST
GVGKLLMAQSANNVKKLSLELGGNAPFIVFEDADINAAIDGVMVAKFRNAGQTCVCANRIYVHDAVYDQFAAKLVDRVSR
LNVGYGLDAGVNIGPLINDAAVAKVTSHIVDAQSKGAKVMFGALPEAGSRLFQPHVLTEVTDEMRVADEETFGPLAALFR
FSSEQEVIERANATDSGLAAYCYTQSLRRAWHMSEALEAGIVGINEGLISTTLAPFGGIKESGLGREGAKHGLEEYLEVK
YTLMGGLA

Sequences:

>Translated_488_residues
MRSLAMLPTDFPFFHQSAFINGQWILGEPQARQTVTNPFDGSLIGSVPLLSAAQVQEAIAGAQAAQILWCQQPAENKAKI
LRRWYELIEQHHESLAKLLTIEQGKPLAEARGEIHYAASFVEWYAEEAKRAYGELIPSHKPDARIMVSRQPVGVVAAITP
WNFPAAMITRKCAPAFAAGCAVVLKPAPDTPFTALALADLAQQAGIPDGLLQVVTGDAIEIGRVLTESKTVRKLSFTGST
GVGKLLMAQSANNVKKLSLELGGNAPFIVFEDADINAAIDGVMVAKFRNAGQTCVCANRIYVHDAVYDQFAAKLVDRVSR
LNVGYGLDAGVNIGPLINDAAVAKVTSHIVDAQSKGAKVMFGALPEAGSRLFQPHVLTEVTDEMRVADEETFGPLAALFR
FSSEQEVIERANATDSGLAAYCYTQSLRRAWHMSEALEAGIVGINEGLISTTLAPFGGIKESGLGREGAKHGLEEYLEVK
YTLMGGLA
>Mature_488_residues
MRSLAMLPTDFPFFHQSAFINGQWILGEPQARQTVTNPFDGSLIGSVPLLSAAQVQEAIAGAQAAQILWCQQPAENKAKI
LRRWYELIEQHHESLAKLLTIEQGKPLAEARGEIHYAASFVEWYAEEAKRAYGELIPSHKPDARIMVSRQPVGVVAAITP
WNFPAAMITRKCAPAFAAGCAVVLKPAPDTPFTALALADLAQQAGIPDGLLQVVTGDAIEIGRVLTESKTVRKLSFTGST
GVGKLLMAQSANNVKKLSLELGGNAPFIVFEDADINAAIDGVMVAKFRNAGQTCVCANRIYVHDAVYDQFAAKLVDRVSR
LNVGYGLDAGVNIGPLINDAAVAKVTSHIVDAQSKGAKVMFGALPEAGSRLFQPHVLTEVTDEMRVADEETFGPLAALFR
FSSEQEVIERANATDSGLAAYCYTQSLRRAWHMSEALEAGIVGINEGLISTTLAPFGGIKESGLGREGAKHGLEEYLEVK
YTLMGGLA

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=490, Percent_Identity=47.5510204081633, Blast_Score=440, Evalue=1e-123,
Organism=Homo sapiens, GI25777721, Length=503, Percent_Identity=46.1232604373757, Blast_Score=429, Evalue=1e-120,
Organism=Homo sapiens, GI21614513, Length=480, Percent_Identity=36.6666666666667, Blast_Score=296, Evalue=3e-80,
Organism=Homo sapiens, GI25777730, Length=482, Percent_Identity=36.7219917012448, Blast_Score=295, Evalue=4e-80,
Organism=Homo sapiens, GI153266822, Length=473, Percent_Identity=37.6321353065539, Blast_Score=291, Evalue=7e-79,
Organism=Homo sapiens, GI25777724, Length=489, Percent_Identity=35.3783231083845, Blast_Score=288, Evalue=6e-78,
Organism=Homo sapiens, GI115387104, Length=451, Percent_Identity=36.1419068736142, Blast_Score=285, Evalue=8e-77,
Organism=Homo sapiens, GI25777732, Length=473, Percent_Identity=35.3065539112051, Blast_Score=282, Evalue=5e-76,
Organism=Homo sapiens, GI238814322, Length=473, Percent_Identity=34.0380549682875, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI21361176, Length=484, Percent_Identity=35.5371900826446, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI12007648, Length=454, Percent_Identity=35.0220264317181, Blast_Score=271, Evalue=1e-72,
Organism=Homo sapiens, GI25777728, Length=410, Percent_Identity=36.8292682926829, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI25777726, Length=488, Percent_Identity=32.7868852459016, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI25952152, Length=445, Percent_Identity=31.685393258427, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI310128093, Length=467, Percent_Identity=29.1220556745182, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI188035924, Length=468, Percent_Identity=28.8461538461538, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI310128103, Length=469, Percent_Identity=28.7846481876333, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI301500698, Length=278, Percent_Identity=37.7697841726619, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI11095441, Length=472, Percent_Identity=26.6949152542373, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI310128091, Length=389, Percent_Identity=29.5629820051414, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI223972651, Length=467, Percent_Identity=28.2655246252677, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI206597441, Length=437, Percent_Identity=29.0617848970252, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI206597439, Length=437, Percent_Identity=29.0617848970252, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI22907049, Length=437, Percent_Identity=29.0617848970252, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI73466520, Length=340, Percent_Identity=28.5294117647059, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI4557303, Length=343, Percent_Identity=28.2798833819242, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI310128089, Length=333, Percent_Identity=29.1291291291291, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI73695881, Length=344, Percent_Identity=29.0697674418605, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI73695879, Length=344, Percent_Identity=29.0697674418605, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI71773324, Length=343, Percent_Identity=28.5714285714286, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4502043, Length=343, Percent_Identity=28.5714285714286, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI238814371, Length=343, Percent_Identity=28.5714285714286, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI25777736, Length=462, Percent_Identity=26.1904761904762, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI25777734, Length=462, Percent_Identity=26.1904761904762, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI238859541, Length=462, Percent_Identity=26.1904761904762, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI310128097, Length=259, Percent_Identity=31.2741312741313, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI310128087, Length=284, Percent_Identity=29.5774647887324, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI310128095, Length=310, Percent_Identity=28.3870967741935, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI223972653, Length=470, Percent_Identity=24.6808510638298, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI310128099, Length=228, Percent_Identity=28.5087719298246, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI310128101, Length=228, Percent_Identity=28.5087719298246, Blast_Score=91, Evalue=4e-18,
Organism=Escherichia coli, GI1789015, Length=481, Percent_Identity=57.7962577962578, Blast_Score=570, Evalue=1e-164,
Organism=Escherichia coli, GI87081896, Length=471, Percent_Identity=36.0934182590234, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI1787684, Length=468, Percent_Identity=34.4017094017094, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1786504, Length=473, Percent_Identity=36.5750528541226, Blast_Score=281, Evalue=6e-77,
Organism=Escherichia coli, GI1787558, Length=469, Percent_Identity=35.181236673774, Blast_Score=272, Evalue=3e-74,
Organism=Escherichia coli, GI1787715, Length=473, Percent_Identity=34.8837209302326, Blast_Score=255, Evalue=5e-69,
Organism=Escherichia coli, GI87082295, Length=480, Percent_Identity=32.0833333333333, Blast_Score=225, Evalue=6e-60,
Organism=Escherichia coli, GI87081926, Length=453, Percent_Identity=30.242825607064, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1788042, Length=458, Percent_Identity=33.1877729257642, Blast_Score=200, Evalue=1e-52,
Organism=Escherichia coli, GI1787250, Length=461, Percent_Identity=29.2841648590022, Blast_Score=163, Evalue=3e-41,
Organism=Escherichia coli, GI1787653, Length=307, Percent_Identity=25.7328990228013, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17534119, Length=480, Percent_Identity=44.7916666666667, Blast_Score=404, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI133930964, Length=484, Percent_Identity=36.7768595041322, Blast_Score=285, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI17562198, Length=468, Percent_Identity=35.4700854700855, Blast_Score=283, Evalue=2e-76,
Organism=Caenorhabditis elegans, GI25144435, Length=468, Percent_Identity=34.6153846153846, Blast_Score=280, Evalue=1e-75,
Organism=Caenorhabditis elegans, GI25143876, Length=472, Percent_Identity=36.0169491525424, Blast_Score=277, Evalue=9e-75,
Organism=Caenorhabditis elegans, GI25143874, Length=471, Percent_Identity=36.0934182590234, Blast_Score=276, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI32564736, Length=410, Percent_Identity=36.3414634146341, Blast_Score=267, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI71995606, Length=472, Percent_Identity=33.8983050847458, Blast_Score=252, Evalue=4e-67,
Organism=Caenorhabditis elegans, GI115534176, Length=490, Percent_Identity=31.2244897959184, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI71995613, Length=416, Percent_Identity=33.6538461538462, Blast_Score=223, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17551164, Length=454, Percent_Identity=31.057268722467, Blast_Score=214, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI71986308, Length=476, Percent_Identity=27.5210084033613, Blast_Score=169, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI25146391, Length=344, Percent_Identity=28.7790697674419, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI25146394, Length=344, Percent_Identity=28.7790697674419, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI32566756, Length=344, Percent_Identity=28.7790697674419, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17564084, Length=420, Percent_Identity=26.4285714285714, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17534447, Length=443, Percent_Identity=27.313769751693, Blast_Score=118, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI32564151, Length=389, Percent_Identity=28.0205655526992, Blast_Score=112, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI115532534, Length=393, Percent_Identity=26.972010178117, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71990744, Length=272, Percent_Identity=28.6764705882353, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6319478, Length=482, Percent_Identity=47.0954356846473, Blast_Score=447, Evalue=1e-126,
Organism=Saccharomyces cerevisiae, GI6320917, Length=483, Percent_Identity=35.1966873706004, Blast_Score=295, Evalue=9e-81,
Organism=Saccharomyces cerevisiae, GI6324950, Length=493, Percent_Identity=31.6430020283976, Blast_Score=260, Evalue=4e-70,
Organism=Saccharomyces cerevisiae, GI6325196, Length=468, Percent_Identity=32.4786324786325, Blast_Score=252, Evalue=8e-68,
Organism=Saccharomyces cerevisiae, GI6323821, Length=475, Percent_Identity=32.4210526315789, Blast_Score=251, Evalue=3e-67,
Organism=Saccharomyces cerevisiae, GI6323822, Length=475, Percent_Identity=32, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6321828, Length=485, Percent_Identity=25.5670103092783, Blast_Score=163, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6323757, Length=330, Percent_Identity=28.4848484848485, Blast_Score=108, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6321826, Length=498, Percent_Identity=22.8915662650602, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281362580, Length=493, Percent_Identity=48.2758620689655, Blast_Score=494, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472918, Length=493, Percent_Identity=48.2758620689655, Blast_Score=494, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472926, Length=493, Percent_Identity=48.2758620689655, Blast_Score=494, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472936, Length=493, Percent_Identity=48.2758620689655, Blast_Score=494, Evalue=1e-140,
Organism=Drosophila melanogaster, GI21356737, Length=493, Percent_Identity=48.2758620689655, Blast_Score=494, Evalue=1e-140,
Organism=Drosophila melanogaster, GI24650465, Length=477, Percent_Identity=35.8490566037736, Blast_Score=298, Evalue=6e-81,
Organism=Drosophila melanogaster, GI20129399, Length=489, Percent_Identity=35.3783231083845, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI24585660, Length=473, Percent_Identity=33.615221987315, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24666674, Length=467, Percent_Identity=29.7644539614561, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24638878, Length=473, Percent_Identity=26.215644820296, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24638876, Length=473, Percent_Identity=26.215644820296, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI281360301, Length=424, Percent_Identity=24.7641509433962, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI45552499, Length=424, Percent_Identity=24.7641509433962, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI281360303, Length=424, Percent_Identity=24.7641509433962, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI281360299, Length=424, Percent_Identity=24.7641509433962, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI281360297, Length=424, Percent_Identity=24.7641509433962, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI281360295, Length=424, Percent_Identity=24.7641509433962, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24586250, Length=424, Percent_Identity=24.7641509433962, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24668425, Length=440, Percent_Identity=22.7272727272727, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24668417, Length=440, Percent_Identity=22.7272727272727, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24668413, Length=440, Percent_Identity=22.7272727272727, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281360293, Length=240, Percent_Identity=25.4166666666667, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28571798, Length=487, Percent_Identity=22.9979466119097, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571796, Length=487, Percent_Identity=22.9979466119097, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571794, Length=487, Percent_Identity=22.9979466119097, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571806, Length=487, Percent_Identity=22.9979466119097, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571802, Length=487, Percent_Identity=22.9979466119097, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571800, Length=487, Percent_Identity=22.9979466119097, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28574525, Length=429, Percent_Identity=22.3776223776224, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52404; Mature: 52404

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLAMLPTDFPFFHQSAFINGQWILGEPQARQTVTNPFDGSLIGSVPLLSAAQVQEAIA
CCCCCCCCCCCCCHHHHEEECCEEEECCCHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHH
GAQAAQILWCQQPAENKAKILRRWYELIEQHHESLAKLLTIEQGKPLAEARGEIHYAASF
CHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHH
VEWYAEEAKRAYGELIPSHKPDARIMVSRQPVGVVAAITPWNFPAAMITRKCAPAFAAGC
HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
AVVLKPAPDTPFTALALADLAQQAGIPDGLLQVVTGDAIEIGRVLTESKTVRKLSFTGST
EEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCC
GVGKLLMAQSANNVKKLSLELGGNAPFIVFEDADINAAIDGVMVAKFRNAGQTCVCANRI
CHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEE
YVHDAVYDQFAAKLVDRVSRLNVGYGLDAGVNIGPLINDAAVAKVTSHIVDAQSKGAKVM
EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
FGALPEAGSRLFQPHVLTEVTDEMRVADEETFGPLAALFRFSSEQEVIERANATDSGLAA
EECCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH
YCYTQSLRRAWHMSEALEAGIVGINEGLISTTLAPFGGIKESGLGREGAKHGLEEYLEVK
HHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
YTLMGGLA
HHHHCCCC
>Mature Secondary Structure
MRSLAMLPTDFPFFHQSAFINGQWILGEPQARQTVTNPFDGSLIGSVPLLSAAQVQEAIA
CCCCCCCCCCCCCHHHHEEECCEEEECCCHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHH
GAQAAQILWCQQPAENKAKILRRWYELIEQHHESLAKLLTIEQGKPLAEARGEIHYAASF
CHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHH
VEWYAEEAKRAYGELIPSHKPDARIMVSRQPVGVVAAITPWNFPAAMITRKCAPAFAAGC
HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
AVVLKPAPDTPFTALALADLAQQAGIPDGLLQVVTGDAIEIGRVLTESKTVRKLSFTGST
EEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCC
GVGKLLMAQSANNVKKLSLELGGNAPFIVFEDADINAAIDGVMVAKFRNAGQTCVCANRI
CHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEE
YVHDAVYDQFAAKLVDRVSRLNVGYGLDAGVNIGPLINDAAVAKVTSHIVDAQSKGAKVM
EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
FGALPEAGSRLFQPHVLTEVTDEMRVADEETFGPLAALFRFSSEQEVIERANATDSGLAA
EECCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH
YCYTQSLRRAWHMSEALEAGIVGINEGLISTTLAPFGGIKESGLGREGAKHGLEEYLEVK
HHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
YTLMGGLA
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]