| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is yieG [C]
Identifier: 147675075
GI number: 147675075
Start: 1985227
End: 1986519
Strand: Reverse
Name: yieG [C]
Synonym: VC0395_A1868
Alternate gene names: 147675075
Gene position: 1986519-1985227 (Counterclockwise)
Preceding gene: 147673593
Following gene: 147675317
Centisome position: 65.69
GC content: 49.34
Gene sequence:
>1293_bases ATGCTGGAAAAGCTTTTTAAACTCAGTGAATACGGCACGAACGTGCGCACTGAGATCCTCGCTGGGGTCACGACTTTCCT GACCATGGCTTACATTATTTTTGTTAACCCAGCCATTTTGTCGGATGCGGGAATGGATCGCGGTGCGGTTTTCGTGGCGA CCTGTTTGGCGGCCGCGATTGGCTGTTTCATTATGGGTTTTATTGCCAATTATCCTATCGCTCAAGCGCCAGGTATGGGG CTTAATGCCTTCTTCACTTATGGTGTGGTTCTTGGTATGGGACACACTTGGCAAGTCGCTCTGGCCGCGGTGTTCTGCTC GGGCGTGCTGTTTATCCTACTCAGCTTGTTCAAAATCCGTGAGTGGATCATCAACTCGATTCCTCACTCTTTACGTACTG GCATTTCAGCGGGTATTGGTCTGTTCTTAGCTTTCATCGCATTAAAAAATGCGGGCATTGTGGTCGATAATCCGGCAACA CTGGTTTCTTTAGGCGCAATTACCTCGCTGCATGCGGTGTTGGCAGCAGTGGGCTTCTTCCTGACGATTGGTTTAGTCTA TCGCGGTGTCAAAGGCGCGGTGATGATTGCTATTTTAGCGGTGACAGCTCTCGGTCTCGTATTTGGTGATGTGCAATGGG GCGGCATTATGTCTACGCCTCCGAGTATCGCGCCGACCTTCATGCAACTCGATTTCTCTGCTGTCTTTGAGATCGGCATG ATTTCTGTGGTGTTTGCGTTCTTGTTTGTTGACCTATTTGACACTGCTGGCACCTTGGTTGGCGTTGCAACCAAAGCGGG ATTGATCGAAAAAGATGGCAAAATTCCGCGCCTGAATCGTGCCCTGTTGGCGGATTCGACAGCAACGTCTGTCGGCGCTC TGCTCGGTACTTCAAACACCACTTCTTATATTGAAAGTGTCTCCGGTGTTGCTGTTGGTGGCCGTACTGGTTTAACTGCT GTGGTGGTTGGCATTTTGTTCCTTCTTGCATTATTCTTCTCGCCACTAGCGGGTATGATCCCAGCTTATGCGACGGCCGG TGCACTTTTCTATGTTGCTATTCTGATGATGTCGGGGTTAGTGAGCATTGATTGGCGTGATCTGACTGAAGCGGCACCCA CTGTTGTTACCTGTTTGATGATGCCTCTGACATTCTCGATTGCGGAAGGTATCTCACTCGGTTTTATTGCTTATGCCGCA ATCAAACTTTTCAGTGGTAAAGGACGCAGCGTCTCTCTCAGTGTATGGGTTATGGCGGCCATTTTTGTCATCAAATACAT TTTGGCGGCGTAA
Upstream 100 bases:
>100_bases ACAGTCAGAATTGTGTCTGGAATTTGTTTTTTGATAACTCTATAATCGCCGCCAATCGTTTACGCAACCGTTTACTTTTT TACCACTAAAGGATTCGAAC
Downstream 100 bases:
>100_bases GAGAAGACATTATAAAAATTCAATTTAGGTTTATCACATGAGCAAAAAATTCGTTATCACCTGGGACAATATGCAGCATT ACTGCCGTGAACTTGCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MLEKLFKLSEYGTNVRTEILAGVTTFLTMAYIIFVNPAILSDAGMDRGAVFVATCLAAAIGCFIMGFIANYPIAQAPGMG LNAFFTYGVVLGMGHTWQVALAAVFCSGVLFILLSLFKIREWIINSIPHSLRTGISAGIGLFLAFIALKNAGIVVDNPAT LVSLGAITSLHAVLAAVGFFLTIGLVYRGVKGAVMIAILAVTALGLVFGDVQWGGIMSTPPSIAPTFMQLDFSAVFEIGM ISVVFAFLFVDLFDTAGTLVGVATKAGLIEKDGKIPRLNRALLADSTATSVGALLGTSNTTSYIESVSGVAVGGRTGLTA VVVGILFLLALFFSPLAGMIPAYATAGALFYVAILMMSGLVSIDWRDLTEAAPTVVTCLMMPLTFSIAEGISLGFIAYAA IKLFSGKGRSVSLSVWVMAAIFVIKYILAA
Sequences:
>Translated_430_residues MLEKLFKLSEYGTNVRTEILAGVTTFLTMAYIIFVNPAILSDAGMDRGAVFVATCLAAAIGCFIMGFIANYPIAQAPGMG LNAFFTYGVVLGMGHTWQVALAAVFCSGVLFILLSLFKIREWIINSIPHSLRTGISAGIGLFLAFIALKNAGIVVDNPAT LVSLGAITSLHAVLAAVGFFLTIGLVYRGVKGAVMIAILAVTALGLVFGDVQWGGIMSTPPSIAPTFMQLDFSAVFEIGM ISVVFAFLFVDLFDTAGTLVGVATKAGLIEKDGKIPRLNRALLADSTATSVGALLGTSNTTSYIESVSGVAVGGRTGLTA VVVGILFLLALFFSPLAGMIPAYATAGALFYVAILMMSGLVSIDWRDLTEAAPTVVTCLMMPLTFSIAEGISLGFIAYAA IKLFSGKGRSVSLSVWVMAAIFVIKYILAA >Mature_430_residues MLEKLFKLSEYGTNVRTEILAGVTTFLTMAYIIFVNPAILSDAGMDRGAVFVATCLAAAIGCFIMGFIANYPIAQAPGMG LNAFFTYGVVLGMGHTWQVALAAVFCSGVLFILLSLFKIREWIINSIPHSLRTGISAGIGLFLAFIALKNAGIVVDNPAT LVSLGAITSLHAVLAAVGFFLTIGLVYRGVKGAVMIAILAVTALGLVFGDVQWGGIMSTPPSIAPTFMQLDFSAVFEIGM ISVVFAFLFVDLFDTAGTLVGVATKAGLIEKDGKIPRLNRALLADSTATSVGALLGTSNTTSYIESVSGVAVGGRTGLTA VVVGILFLLALFFSPLAGMIPAYATAGALFYVAILMMSGLVSIDWRDLTEAAPTVVTCLMMPLTFSIAEGISLGFIAYAA IKLFSGKGRSVSLSVWVMAAIFVIKYILAA
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=427, Percent_Identity=52.6932084309134, Blast_Score=445, Evalue=1e-126, Organism=Escherichia coli, GI87082309, Length=427, Percent_Identity=51.5222482435597, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI1790499, Length=433, Percent_Identity=39.2609699769053, Blast_Score=277, Evalue=1e-75, Organism=Escherichia coli, GI48994909, Length=432, Percent_Identity=37.962962962963, Blast_Score=254, Evalue=8e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 44947; Mature: 44947
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKLFKLSEYGTNVRTEILAGVTTFLTMAYIIFVNPAILSDAGMDRGAVFVATCLAAAI CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHH GCFIMGFIANYPIAQAPGMGLNAFFTYGVVLGMGHTWQVALAAVFCSGVLFILLSLFKIR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EWIINSIPHSLRTGISAGIGLFLAFIALKNAGIVVDNPATLVSLGAITSLHAVLAAVGFF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH LTIGLVYRGVKGAVMIAILAVTALGLVFGDVQWGGIMSTPPSIAPTFMQLDFSAVFEIGM HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ISVVFAFLFVDLFDTAGTLVGVATKAGLIEKDGKIPRLNRALLADSTATSVGALLGTSNT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCH TSYIESVSGVAVGGRTGLTAVVVGILFLLALFFSPLAGMIPAYATAGALFYVAILMMSGL HHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VSIDWRDLTEAAPTVVTCLMMPLTFSIAEGISLGFIAYAAIKLFSGKGRSVSLSVWVMAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH IFVIKYILAA HHHHHHHHCC >Mature Secondary Structure MLEKLFKLSEYGTNVRTEILAGVTTFLTMAYIIFVNPAILSDAGMDRGAVFVATCLAAAI CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHH GCFIMGFIANYPIAQAPGMGLNAFFTYGVVLGMGHTWQVALAAVFCSGVLFILLSLFKIR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EWIINSIPHSLRTGISAGIGLFLAFIALKNAGIVVDNPATLVSLGAITSLHAVLAAVGFF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH LTIGLVYRGVKGAVMIAILAVTALGLVFGDVQWGGIMSTPPSIAPTFMQLDFSAVFEIGM HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ISVVFAFLFVDLFDTAGTLVGVATKAGLIEKDGKIPRLNRALLADSTATSVGALLGTSNT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCH TSYIESVSGVAVGGRTGLTAVVVGILFLLALFFSPLAGMIPAYATAGALFYVAILMMSGL HHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VSIDWRDLTEAAPTVVTCLMMPLTFSIAEGISLGFIAYAAIKLFSGKGRSVSLSVWVMAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH IFVIKYILAA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]