| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is gpt
Identifier: 147675317
GI number: 147675317
Start: 1984725
End: 1985189
Strand: Reverse
Name: gpt
Synonym: VC0395_A1867
Alternate gene names: 147675317
Gene position: 1985189-1984725 (Counterclockwise)
Preceding gene: 147675075
Following gene: 147675488
Centisome position: 65.65
GC content: 47.74
Gene sequence:
>465_bases ATGAGCAAAAAATTCGTTATCACCTGGGACAATATGCAGCATTACTGCCGTGAACTTGCACAGCGTCAAATGCCTGCAGA ACAATGGAAAGGTATCTTGGGTGTCAGCCGTGGTGGCTTAGTTCCCGCTGCTATTCTCGCTCGCGAGTTGGGCATTCGCT ATGTGGATACGGTGTGTATCTCGAGCTATGACCATGATCACCAGCGTGATATGACAGTTCTGAAAGCACCAGAGCATGAC GGCGAAGGTTTCTTGATCATTGACGATCTGGTGGATAGCGGCGATACCGCACGTAAAATCCGTGAAATGTATCCGAAAGC GAAATTTGTGACTGTCTGTGCTAAACCTGCGGGTAAAGACTTGGTTGACGAGTACGTGGTTGATATTCCACAAGACACTT GGATCGAGCAACCATGGGACATGGTGCTGTCTTATGTTGAGCCAGTTAATCGCAAGCAAAAATAG
Upstream 100 bases:
>100_bases GTCTCTCTCAGTGTATGGGTTATGGCGGCCATTTTTGTCATCAAATACATTTTGGCGGCGTAAGAGAAGACATTATAAAA ATTCAATTTAGGTTTATCAC
Downstream 100 bases:
>100_bases TCTTTTTGCCGAGAATTTGAAAATGACCCTTTCAAGGGTCATTTTTTTTTACTACTGTTAGCCCAACTTAGCGCAACGCC AGTAAAGAGACTTGTCATGT
Product: xanthine-guanine phosphoribosyltransferase
Products: NA
Alternate protein names: Xanthine-guanine phosphoribosyltransferase; XGPRT
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSKKFVITWDNMQHYCRELAQRQMPAEQWKGILGVSRGGLVPAAILARELGIRYVDTVCISSYDHDHQRDMTVLKAPEHD GEGFLIIDDLVDSGDTARKIREMYPKAKFVTVCAKPAGKDLVDEYVVDIPQDTWIEQPWDMVLSYVEPVNRKQK
Sequences:
>Translated_154_residues MSKKFVITWDNMQHYCRELAQRQMPAEQWKGILGVSRGGLVPAAILARELGIRYVDTVCISSYDHDHQRDMTVLKAPEHD GEGFLIIDDLVDSGDTARKIREMYPKAKFVTVCAKPAGKDLVDEYVVDIPQDTWIEQPWDMVLSYVEPVNRKQK >Mature_153_residues SKKFVITWDNMQHYCRELAQRQMPAEQWKGILGVSRGGLVPAAILARELGIRYVDTVCISSYDHDHQRDMTVLKAPEHDG EGFLIIDDLVDSGDTARKIREMYPKAKFVTVCAKPAGKDLVDEYVVDIPQDTWIEQPWDMVLSYVEPVNRKQK
Specific function: Acts on guanine, xanthine and to a lesser extent hypoxanthine
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily
Homologues:
Organism=Escherichia coli, GI1786433, Length=152, Percent_Identity=69.7368421052632, Blast_Score=231, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): XGPT_VIBC3 (A5F5Y8)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F5Y8 - SMR: A5F5Y8 - STRING: A5F5Y8 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A1867 - eggNOG: COG0503 - HOGENOM: HBG503428 - OMA: LVDTFIT - ProtClustDB: PRK09177 - BioCyc: VCHO345073:VC0395_A1867-MONOMER - HAMAP: MF_01903 - InterPro: IPR000836
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.22
Molecular weight: Translated: 17666; Mature: 17535
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: BINDING 69-69 BINDING 92-92 BINDING 135-135
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKFVITWDNMQHYCRELAQRQMPAEQWKGILGVSRGGLVPAAILARELGIRYVDTVCI CCCCEEEEEHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHH SSYDHDHQRDMTVLKAPEHDGEGFLIIDDLVDSGDTARKIREMYPKAKFVTVCAKPAGKD HCCCCCCHHCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHH LVDEYVVDIPQDTWIEQPWDMVLSYVEPVNRKQK HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SKKFVITWDNMQHYCRELAQRQMPAEQWKGILGVSRGGLVPAAILARELGIRYVDTVCI CCCEEEEEHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHH SSYDHDHQRDMTVLKAPEHDGEGFLIIDDLVDSGDTARKIREMYPKAKFVTVCAKPAGKD HCCCCCCHHCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHH LVDEYVVDIPQDTWIEQPWDMVLSYVEPVNRKQK HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA