Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

Click here to switch to the map view.

The map label for this gene is 147673637

Identifier: 147673637

GI number: 147673637

Start: 677968

End: 678396

Strand: Direct

Name: 147673637

Synonym: VC0395_A0636

Alternate gene names: NA

Gene position: 677968-678396 (Clockwise)

Preceding gene: 147675037

Following gene: 147675476

Centisome position: 22.42

GC content: 45.45

Gene sequence:

>429_bases
ATGAGCATTATGGACGTACAACACGTCGCGCAGTTTTATCAACAATTAGATAAAAGCCAATTACATAGGCTGATTGAAAT
CTATCATCCTGATGTGGTGTTTGAAGATGCCGCACATCGCATCGAAGGGTTTGACGCCCTTTACCAGTATTTTTTGAATC
TTTACCAAAACGTCCATACCTGTACTTTTACCATTCATGAGCAGTATGCGGTCAATGAGGGCGCGTTTTTGGTCTGGACC
ATGCATTTACGTCACCCAAAATTAGCCAAGGGCGAACAGGTGGATGTGAAAGGCGTGAGCCACTTGCACTTTGCCGAGGG
CAAAGTGACCTACCATCGCGATTATTTCGATATGGGGGAAATGCTTTATGAGCAATTGCCTGTGCTTGGGCAAGTTATCC
GCGCGATTAAGCGGAGACTAGGACAATGA

Upstream 100 bases:

>100_bases
ATGAAGTATAAAGTTGTACAGAAAAAATCTTGTACAACTTTACAAACTCAACTATGGTTGTAATGCATTATACGAATCTT
AAATTTGTATAACTTTAGGG

Downstream 100 bases:

>100_bases
CCGCGGTGTTCATTACCGGTGCGACCTCCGGAATTGGTAAACAACTGGCGTTGGATTATGCCAAACAGGGTTGGCAAGTG
ATTGCGTGTGGACGTAATCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator-Related Protein; Ketosteroid Isomerase-Like Protein; Isomerase; Ketosteroid Isomerase-Related Protein Cystatin Fold

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSIMDVQHVAQFYQQLDKSQLHRLIEIYHPDVVFEDAAHRIEGFDALYQYFLNLYQNVHTCTFTIHEQYAVNEGAFLVWT
MHLRHPKLAKGEQVDVKGVSHLHFAEGKVTYHRDYFDMGEMLYEQLPVLGQVIRAIKRRLGQ

Sequences:

>Translated_142_residues
MSIMDVQHVAQFYQQLDKSQLHRLIEIYHPDVVFEDAAHRIEGFDALYQYFLNLYQNVHTCTFTIHEQYAVNEGAFLVWT
MHLRHPKLAKGEQVDVKGVSHLHFAEGKVTYHRDYFDMGEMLYEQLPVLGQVIRAIKRRLGQ
>Mature_141_residues
SIMDVQHVAQFYQQLDKSQLHRLIEIYHPDVVFEDAAHRIEGFDALYQYFLNLYQNVHTCTFTIHEQYAVNEGAFLVWTM
HLRHPKLAKGEQVDVKGVSHLHFAEGKVTYHRDYFDMGEMLYEQLPVLGQVIRAIKRRLGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16762; Mature: 16631

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIMDVQHVAQFYQQLDKSQLHRLIEIYHPDVVFEDAAHRIEGFDALYQYFLNLYQNVHT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
CTFTIHEQYAVNEGAFLVWTMHLRHPKLAKGEQVDVKGVSHLHFAEGKVTYHRDYFDMGE
EEEEEEHHEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEHHHHHHHH
MLYEQLPVLGQVIRAIKRRLGQ
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIMDVQHVAQFYQQLDKSQLHRLIEIYHPDVVFEDAAHRIEGFDALYQYFLNLYQNVHT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
CTFTIHEQYAVNEGAFLVWTMHLRHPKLAKGEQVDVKGVSHLHFAEGKVTYHRDYFDMGE
EEEEEEHHEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEHHHHHHHH
MLYEQLPVLGQVIRAIKRRLGQ
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA