| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673520
Identifier: 147673520
GI number: 147673520
Start: 1456001
End: 1456735
Strand: Reverse
Name: 147673520
Synonym: VC0395_A1361
Alternate gene names: NA
Gene position: 1456735-1456001 (Counterclockwise)
Preceding gene: 147675323
Following gene: 147674089
Centisome position: 48.17
GC content: 40.14
Gene sequence:
>735_bases ATGCGTAGAGGTGTTCGTTCGCATACACAAAACTCAGTAGATGAAGAAAATCCCTACTGGGTTTCATTTTCCGATCTAAT GTCTGCTTTGCTTGTTATATTTATACTTGCAGCTGTTGCTCTGATTATTGAATTAACTCAAAAGACCAATGATGTCGAAG CTGGTATTGAAGAGCTTAAGCAAGCTGAGTTAGCAAGAAAGAATATAATTTATGATGTTCGAGACGAACTGGCTAAAAGA AACGTAATTGTTGAAATTGCTGATAACGATACGGTAATTCGGATTCCAGAAAGCACACTGACGTTTGCATCAGGTAAATC ATCAATTCCGAACGATGCAACAATACAGCAAGCAGTTAAGGACATAGGTGTTGTTCTTCATTCTGCAATTCAGAAGAAAG ACCGATTTCAATATCTCGATACCATTTTTATTGAGGGGCATACCGATAGCGATAGTATCCATTACAGAGGAAAAGGGAAT TGGGGGTTATCTACTGATCGAGCAATATCTGTCTGGAATGTCTGGCAAAATGAACTGAGCTTAACGCCTAAACTCGGTGA CTTAGAAAACGCTTATCATGCAAAGCTGTTCTCTGTTAGTGGTTATGCGGCGACAAGACGTGCCAATCTACATGAGGCGA ATCAGCAAGAAAAGAGCCAGAATAGGCGCATTGATATTCGATTTACAGTTAAGAAACCATCTATTGCTGAGCTCGAGAGG ATTGTTGGACCGTGA
Upstream 100 bases:
>100_bases GTTTGGGCCAATAGTAGCACACAATATGCAGAGAGCATGAATACAGCAGTTAGAGCTATTTCTAGTGTTGTCGATGAAAT TCAAGATAAAGTGAGCCAAC
Downstream 100 bases:
>100_bases GTCTAAATATAAAAAAGCTCAAAGTTAGTTTGCCTGCTAATCCTTTTGGTCAAGCCATCAAGGACTTTGCACATCTATCG AGTCAGCTAGAAGTGCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: OmpA/MotB Domain-Containing Protein; Flagellar Motor Protein; OmpA/MotB Domain Protein; Chemotaxis Protein MotB-Like Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MRRGVRSHTQNSVDEENPYWVSFSDLMSALLVIFILAAVALIIELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKR NVIVEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGN WGLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLHEANQQEKSQNRRIDIRFTVKKPSIAELER IVGP
Sequences:
>Translated_244_residues MRRGVRSHTQNSVDEENPYWVSFSDLMSALLVIFILAAVALIIELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKR NVIVEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGN WGLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLHEANQQEKSQNRRIDIRFTVKKPSIAELER IVGP >Mature_244_residues MRRGVRSHTQNSVDEENPYWVSFSDLMSALLVIFILAAVALIIELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKR NVIVEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGN WGLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLHEANQQEKSQNRRIDIRFTVKKPSIAELER IVGP
Specific function: Unknown
COG id: COG1360
COG function: function code N; Flagellar motor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27516; Mature: 27516
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGVRSHTQNSVDEENPYWVSFSDLMSALLVIFILAAVALIIELTQKTNDVEAGIEELK CCCCCCHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVK HHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHH DIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGNWGLSTDRAISVWNVWQNELS HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHC LTPKLGDLENAYHAKLFSVSGYAATRRANLHEANQQEKSQNRRIDIRFTVKKPSIAELER CCCCCCCCCHHHHHEEEEECCCHHHHHCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHH IVGP HHCC >Mature Secondary Structure MRRGVRSHTQNSVDEENPYWVSFSDLMSALLVIFILAAVALIIELTQKTNDVEAGIEELK CCCCCCHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVK HHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHH DIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGNWGLSTDRAISVWNVWQNELS HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHC LTPKLGDLENAYHAKLFSVSGYAATRRANLHEANQQEKSQNRRIDIRFTVKKPSIAELER CCCCCCCCCHHHHHEEEEECCCHHHHHCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHH IVGP HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA