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The map label for this gene is yrbD [C]

Identifier: 147673144

GI number: 147673144

Start: 2258039

End: 2258530

Strand: Reverse

Name: yrbD [C]

Synonym: VC0395_A2100

Alternate gene names: 147673144

Gene position: 2258530-2258039 (Counterclockwise)

Preceding gene: 147675288

Following gene: 147674971

Centisome position: 74.69

GC content: 46.54

Gene sequence:

>492_bases
ATGCAACAAACACGAAAAATTGAATTTTGGGTTGGCAGCTTTGTCATCGCGGGAATTTGCGCGATTTTAGTGATGATTTT
TCAGGTCGCTGACGTCAAAGGCCTTGGCTCCAGCAATACTTATCGCCTGACCGCAGAGTTTGACAATATTGGTAGCTTGA
AAGTGCGCTCTCCAGTCAAAGTGGGAGGTGTGGTGGTTGGACGCGTTGAGTCGATCGCGCTGAACCCGAAAAATCTATTA
CCGACAGTTACCTTGGCGATCGACAGCCAGTTTAACCAGTTTCCTGAGAACTCAAGTTTGCAGATCCTGACGTCAGGCTT
GATTGGGGAGCAATATTTGAGTTTAGTGCCCGGATTTGTGTTTGAAGATGAAGCCATGCTGAAAGAGGGCGATCGCATTG
AAGACACCAAATCCGCATTAGTATTGGAAGATTTGATTGGCCAAGTGCTGTATAGCGTGGGTGGCGGATCAGACAAAGAG
AAAAAGGAATAA

Upstream 100 bases:

>100_bases
AAGGGATCAGCCGAGCGACCACTCGCACCGTAGTGCACTCATCACTGGCCGTACTTGGGCTGGATTTTGTTCTAACCGCA
TTGATGTTTGGGAACTGATC

Downstream 100 bases:

>100_bases
GTGATGTGGAAAAAAGCGCTACTCCTCGCGAGTACCCTGTTAACGCCTTGGCTTGCGACAGCGGCCACCATTGATACCAG
CAACCCTTATCAAATGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MQQTRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSSNTYRLTAEFDNIGSLKVRSPVKVGGVVVGRVESIALNPKNLL
PTVTLAIDSQFNQFPENSSLQILTSGLIGEQYLSLVPGFVFEDEAMLKEGDRIEDTKSALVLEDLIGQVLYSVGGGSDKE
KKE

Sequences:

>Translated_163_residues
MQQTRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSSNTYRLTAEFDNIGSLKVRSPVKVGGVVVGRVESIALNPKNLL
PTVTLAIDSQFNQFPENSSLQILTSGLIGEQYLSLVPGFVFEDEAMLKEGDRIEDTKSALVLEDLIGQVLYSVGGGSDKE
KKE
>Mature_163_residues
MQQTRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSSNTYRLTAEFDNIGSLKVRSPVKVGGVVVGRVESIALNPKNLL
PTVTLAIDSQFNQFPENSSLQILTSGLIGEQYLSLVPGFVFEDEAMLKEGDRIEDTKSALVLEDLIGQVLYSVGGGSDKE
KKE

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=161, Percent_Identity=55.2795031055901, Blast_Score=159, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 17684; Mature: 17684

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSSNTYRLTAEFDNIGSLKVRSPVK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEECCCCC
VGGVVVGRVESIALNPKNLLPTVTLAIDSQFNQFPENSSLQILTSGLIGEQYLSLVPGFV
CCCEEEECCEEEEECCCHHCCEEEEEECCHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCE
FEDEAMLKEGDRIEDTKSALVLEDLIGQVLYSVGGGSDKEKKE
ECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQQTRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSSNTYRLTAEFDNIGSLKVRSPVK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEECCCCC
VGGVVVGRVESIALNPKNLLPTVTLAIDSQFNQFPENSSLQILTSGLIGEQYLSLVPGFV
CCCEEEECCEEEEECCCHHCCEEEEEECCHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCE
FEDEAMLKEGDRIEDTKSALVLEDLIGQVLYSVGGGSDKEKKE
ECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]