| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is mlaC [H]
Identifier: 147674971
GI number: 147674971
Start: 2257397
End: 2258038
Strand: Reverse
Name: mlaC [H]
Synonym: VC0395_A2099
Alternate gene names: 147674971
Gene position: 2258038-2257397 (Counterclockwise)
Preceding gene: 147673144
Following gene: 147675756
Centisome position: 74.67
GC content: 48.13
Gene sequence:
>642_bases GTGATGTGGAAAAAAGCGCTACTCCTCGCGAGTACCCTGTTAACGCCTTGGCTTGCGACAGCGGCCACCATTGATACCAG CAACCCTTATCAAATGATGAAAGCGGTGGCTGAGAAGTCGTTTGATCGTCTGAAAAACGAACAACCCAAAGTGCATCAAG ATCCGCAGTATCTCAAAGTGATTGTGGAAGAAGAGTTGATGCCTTACGTGAACGAACAATACGCGGCGCTTAAACTGCTG GGGCCCAATCTTAAAGGGGCCAAACGTGAAGATGTGGCGGAGTTCGTTAAAGCGTTTCGCGCTTATTTGGTGACGAATTA CGCGCAAGTGCTGACCCAATACACCAATCAAACCATTGAGTTTGGGCCTGAAATGCCATTGGAAGAGGATCGCCGCATCA CTACAGTGAAAGTGGAAATCCTTGATGCGCCGCGTCCGAATATCAAACTGGAATTTAAACTGCGCCAAGAGAAATCGGGT GAGTGGAAAGCGTTTGATATGATTGCTGAAGGCATCAGCTTACTGTCCAGCAAACAGTCGGAATGGAGCGGGAAAATTCG TCAAGAAGGTATTCTGGCGGTCGCGAAAGAGCTGGAACAGTTAGCGAATCAACCGATCCGTTTTGAGAGTCAAAAGCAAT GA
Upstream 100 bases:
>100_bases TCGCATTGAAGACACCAAATCCGCATTAGTATTGGAAGATTTGATTGGCCAAGTGCTGTATAGCGTGGGTGGCGGATCAG ACAAAGAGAAAAAGGAATAA
Downstream 100 bases:
>100_bases GTCATCCACAATGGTCTGCCGAGAATGAACACCAGTTCAGTTTAATTGGCGAACTGGATCGAGAAACGGTACCCAAATTG TGGATCTTTCTCAAAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MMWKKALLLASTLLTPWLATAATIDTSNPYQMMKAVAEKSFDRLKNEQPKVHQDPQYLKVIVEEELMPYVNEQYAALKLL GPNLKGAKREDVAEFVKAFRAYLVTNYAQVLTQYTNQTIEFGPEMPLEEDRRITTVKVEILDAPRPNIKLEFKLRQEKSG EWKAFDMIAEGISLLSSKQSEWSGKIRQEGILAVAKELEQLANQPIRFESQKQ
Sequences:
>Translated_213_residues MMWKKALLLASTLLTPWLATAATIDTSNPYQMMKAVAEKSFDRLKNEQPKVHQDPQYLKVIVEEELMPYVNEQYAALKLL GPNLKGAKREDVAEFVKAFRAYLVTNYAQVLTQYTNQTIEFGPEMPLEEDRRITTVKVEILDAPRPNIKLEFKLRQEKSG EWKAFDMIAEGISLLSSKQSEWSGKIRQEGILAVAKELEQLANQPIRFESQKQ >Mature_213_residues MMWKKALLLASTLLTPWLATAATIDTSNPYQMMKAVAEKSFDRLKNEQPKVHQDPQYLKVIVEEELMPYVNEQYAALKLL GPNLKGAKREDVAEFVKAFRAYLVTNYAQVLTQYTNQTIEFGPEMPLEEDRRITTVKVEILDAPRPNIKLEFKLRQEKSG EWKAFDMIAEGISLLSSKQSEWSGKIRQEGILAVAKELEQLANQPIRFESQKQ
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=213, Percent_Identity=39.906103286385, Blast_Score=171, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 24464; Mature: 24464
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMWKKALLLASTLLTPWLATAATIDTSNPYQMMKAVAEKSFDRLKNEQPKVHQDPQYLKV CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH IVEEELMPYVNEQYAALKLLGPNLKGAKREDVAEFVKAFRAYLVTNYAQVLTQYTNQTIE HHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FGPEMPLEEDRRITTVKVEILDAPRPNIKLEFKLRQEKSGEWKAFDMIAEGISLLSSKQS CCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCH EWSGKIRQEGILAVAKELEQLANQPIRFESQKQ HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMWKKALLLASTLLTPWLATAATIDTSNPYQMMKAVAEKSFDRLKNEQPKVHQDPQYLKV CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH IVEEELMPYVNEQYAALKLLGPNLKGAKREDVAEFVKAFRAYLVTNYAQVLTQYTNQTIE HHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FGPEMPLEEDRRITTVKVEILDAPRPNIKLEFKLRQEKSGEWKAFDMIAEGISLLSSKQS CCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCH EWSGKIRQEGILAVAKELEQLANQPIRFESQKQ HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]