| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is mlaE [H]
Identifier: 147675288
GI number: 147675288
Start: 2258533
End: 2259309
Strand: Reverse
Name: mlaE [H]
Synonym: VC0395_A2101
Alternate gene names: 147675288
Gene position: 2259309-2258533 (Counterclockwise)
Preceding gene: 147674625
Following gene: 147673144
Centisome position: 74.71
GC content: 53.8
Gene sequence:
>777_bases ATGCGATGGGTCAGCTCTGTTGGGCAACGCACGCTGGCGGTCAGTGAAACCTTTGGCCGCGCAAGCTTAATGCTGTTTGG TGCACTGGTAGGGCGTCCGCAGCCGATTCGCCATTTTCCGCTCCTCGTTCGCCAGTTATACAGCATTGGTGTGCAGTCAC TGGCGATCATTATCGTCTCTGGGCTCTTTATTGGCATGGTGCTCAGCTTACAAGGCTATGTGATTTTGGTCGATTACGGC GCAGAAACCAGCCTAGGCCAGATGGTGGCGTTATCATTGCTGCGTGAATTAGGCCCAGTGGTTACGGCACTGCTGTTTGC CGGACGAGCGGGCTCTGCCTTAACCGCCGAAATTGGCTTGATGAAAGCCACCGAGCAGCTGTCTAGCCTTGAAATGATGG CGGTCGATCCACTGAAACGCGTTATTGCGCCACGCTTTTGGGCGGGAGTCATCTCCATGCCGCTGCTGGCGATGATTTTC ATGGCGGTCGGCATTTGGGGCGGCCAATTGGTTGGAGTGGATTGGAAAGGCATTGATCACGGCAGTTTCTGGTCAGCCAT GCAAGCTTCGGTTGAATTGGGCCAAGATATCGGTAACAGCACCATCAAATGTGTGGTGTTTGCGTTTACCGTGACTTGGA TTGCTCTGTTTAACGGTTATGACGCGATCCCGACTTCAGAAGGGATCAGCCGAGCGACCACTCGCACCGTAGTGCACTCA TCACTGGCCGTACTTGGGCTGGATTTTGTTCTAACCGCATTGATGTTTGGGAACTGA
Upstream 100 bases:
>100_bases CGCGTACAACAATTTTTATGCGGCGATGCAGATGGCCCTGTGCCATTTCGTTTTCCTGCGCAGCCGATAGAACAGGAGCT GTTTAGTGCTAAATGATGTG
Downstream 100 bases:
>100_bases TCATGCAACAAACACGAAAAATTGAATTTTGGGTTGGCAGCTTTGTCATCGCGGGAATTTGCGCGATTTTAGTGATGATT TTTCAGGTCGCTGACGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYG AETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIF MAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS SLAVLGLDFVLTALMFGN
Sequences:
>Translated_258_residues MRWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYG AETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIF MAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS SLAVLGLDFVLTALMFGN >Mature_258_residues MRWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYG AETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIF MAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS SLAVLGLDFVLTALMFGN
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=255, Percent_Identity=76.078431372549, Blast_Score=387, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27626; Mature: 27626
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGL HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC GSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH SLAVLGLDFVLTALMFGN HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGL HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC GSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH SLAVLGLDFVLTALMFGN HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]