| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343659
Identifier: 146343659
GI number: 146343659
Start: 7172592
End: 7173395
Strand: Reverse
Name: 146343659
Synonym: BRADO6901
Alternate gene names: NA
Gene position: 7173395-7172592 (Counterclockwise)
Preceding gene: 146343661
Following gene: 146343658
Centisome position: 96.2
GC content: 68.53
Gene sequence:
>804_bases TTGGCGATATCGGCGCGAGCGGCTATTGCTGACGCGATGAAGCTGCTCCCGTCGATCATGGCCGCCGCGCTGCTGGCTGC TTCACCGGCCCTTGCCATCGTCGGCAAAGCGCCGGCGTCTACCGATGGTATCGGACGCTCCGTCGTCACGATCGTCGGTT CGCGCGGCAATTTCTGCAGCGGTGCCTTGATCGCCCCCAGGCTGGTGCTGACCGCCGGCCATTGCGTGCAACCGGGCGTC GATTACCGCATCGTGGAATACGATCGCGACCGCAAGCCGGTGTTGAAGACGGTGCGGCGCGCGGCGGTCCATCCGAGCTT CAGCATGCAATCCATCCTCGTCCATCGGGCTACGGCTGACGTCGCGCTGCTCGAGTTGGAAGCGCCGCTGCAAGGGTATG CGCCGGTCGCGCTCAGTGTCCCGCAGACGCCGCTGACAGCCGGCAATGCGTTCACCGTGGCGGGGATCGGCGTCGCGATT CCCGGCGACGGCAAGAGCGGCGGCGTCGTGCGCGCGGCGGCCCTGGTCGCGACCGGCAAGCCCGGCACGTTGCAGATCCG GCTCGTGGATCCGGCGACGCAGGGCGTGAAGCCAGGGCTCGGCGGCTGCACCGGCGATTCCGGCGGACCTGCGTTCGAGA CGCAGGCGCAAGGCGAAGTACTGATCGGCGTCATCTCGTGGTCCACCGGGCCCAATCTCGGCGACGGCTGCGGCGGCATG ACGGGCGTCACGCCGCTCACGCTGTATCGGGACTGGGTCCTGCAGACCGCGCGGCAATGGGGCATGCCGCTCGGCGGAAA TTGA
Upstream 100 bases:
>100_bases TGTCGTCATCACGCCGCCGAAATCAAAGATCACCGCCTCGACCATCACCGTCATGTCCCCCGTCCGATCCGATCGCCATC GCTAACACGGGACGCCACGC
Downstream 100 bases:
>100_bases AATTCGTCCGCGCGCGTCCGCGGCTTGCTCTCGCGGGTTGACCGTCGTCGTGATCGGGTTCAGCCTGTCACGCGAGGAAA CAACACCTAGAGCAAGAGCC
Product: putative serine protease
Products: NA
Alternate protein names: Serine Protease; Tryptase; Peptidase
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAISARAAIADAMKLLPSIMAAALLAASPALAIVGKAPASTDGIGRSVVTIVGSRGNFCSGALIAPRLVLTAGHCVQPGV DYRIVEYDRDRKPVLKTVRRAAVHPSFSMQSILVHRATADVALLELEAPLQGYAPVALSVPQTPLTAGNAFTVAGIGVAI PGDGKSGGVVRAAALVATGKPGTLQIRLVDPATQGVKPGLGGCTGDSGGPAFETQAQGEVLIGVISWSTGPNLGDGCGGM TGVTPLTLYRDWVLQTARQWGMPLGGN
Sequences:
>Translated_267_residues MAISARAAIADAMKLLPSIMAAALLAASPALAIVGKAPASTDGIGRSVVTIVGSRGNFCSGALIAPRLVLTAGHCVQPGV DYRIVEYDRDRKPVLKTVRRAAVHPSFSMQSILVHRATADVALLELEAPLQGYAPVALSVPQTPLTAGNAFTVAGIGVAI PGDGKSGGVVRAAALVATGKPGTLQIRLVDPATQGVKPGLGGCTGDSGGPAFETQAQGEVLIGVISWSTGPNLGDGCGGM TGVTPLTLYRDWVLQTARQWGMPLGGN >Mature_266_residues AISARAAIADAMKLLPSIMAAALLAASPALAIVGKAPASTDGIGRSVVTIVGSRGNFCSGALIAPRLVLTAGHCVQPGVD YRIVEYDRDRKPVLKTVRRAAVHPSFSMQSILVHRATADVALLELEAPLQGYAPVALSVPQTPLTAGNAFTVAGIGVAIP GDGKSGGVVRAAALVATGKPGTLQIRLVDPATQGVKPGLGGCTGDSGGPAFETQAQGEVLIGVISWSTGPNLGDGCGGMT GVTPLTLYRDWVLQTARQWGMPLGGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI310119200, Length=241, Percent_Identity=26.9709543568465, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503137, Length=189, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4758502, Length=250, Percent_Identity=26.8, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI295054188, Length=233, Percent_Identity=27.4678111587983, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24656592, Length=249, Percent_Identity=29.3172690763052, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26993; Mature: 26861
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISARAAIADAMKLLPSIMAAALLAASPALAIVGKAPASTDGIGRSVVTIVGSRGNFCS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCC GALIAPRLVLTAGHCVQPGVDYRIVEYDRDRKPVLKTVRRAAVHPSFSMQSILVHRATAD CCHHHHHHHEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC VALLELEAPLQGYAPVALSVPQTPLTAGNAFTVAGIGVAIPGDGKSGGVVRAAALVATGK EEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECCC PGTLQIRLVDPATQGVKPGLGGCTGDSGGPAFETQAQGEVLIGVISWSTGPNLGDGCGGM CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC TGVTPLTLYRDWVLQTARQWGMPLGGN CCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AISARAAIADAMKLLPSIMAAALLAASPALAIVGKAPASTDGIGRSVVTIVGSRGNFCS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCC GALIAPRLVLTAGHCVQPGVDYRIVEYDRDRKPVLKTVRRAAVHPSFSMQSILVHRATAD CCHHHHHHHEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC VALLELEAPLQGYAPVALSVPQTPLTAGNAFTVAGIGVAIPGDGKSGGVVRAAALVATGK EEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECCC PGTLQIRLVDPATQGVKPGLGGCTGDSGGPAFETQAQGEVLIGVISWSTGPNLGDGCGGM CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC TGVTPLTLYRDWVLQTARQWGMPLGGN CCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA