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The map label for this gene is exbB [H]

Identifier: 146343118

GI number: 146343118

Start: 6563746

End: 6564723

Strand: Reverse

Name: exbB [H]

Synonym: BRADO6315

Alternate gene names: 146343118

Gene position: 6564723-6563746 (Counterclockwise)

Preceding gene: 146343119

Following gene: 146343117

Centisome position: 88.04

GC content: 69.02

Gene sequence:

>978_bases
GTGACCACCGGCCAGGCCGCGCCCGCAGCGGCTCAGGCTGCGCCGGCTGCCGCGGCAACTAATTCGGCGGCGACCGCTCC
ATCGGCAACCGCGCCCGCCGCGAACCAGGCGCCCACGTCCGCCTCTACCGACGCGCAGGCCTCCAGTGCAACCGAGGCCG
TGACCGACGCGGCCACCGACAAGGCAAGGGACCAGGCGGAGAAGCCAGGTCAGGCCGCGGCGCAGGCGGCCTCTCACGTG
CCGCATGATCTGTCGCCATGGTCGATGTTCCTCGCCGCCGACATCCTGGTGAAATCGGTGATGATGGGGCTCGCCCTGGC
CTCGCTCGCGACCTGGACCGTGTTCATTGCGAAGACCGTCGAGTTCGCGATCCTTCGCCGCAAGCTGCGCAGCGCGTTGC
GCAAGGTCGACGACGTGCGCTGGCTGTCGGAGGCCAAGCTCGCTTTGGGCTCGAAGCAGAGCGTGCTGACCGTGCTGATC
GACGCGGCCATGCACGAGATCAGAATGTCCTCGGAATTGCCGCCGCACGGCGTCAATGAGCGCGCGGCCTCGAGTTTTGC
CGAGATCGTGCGCGCCGAGGGCCGGCGCTGCCGCACCGGCATGGGCCTGCTCGCCACCATCGGCTCGATCTCGCCGTTCG
TCGGCCTGTTCGGCACCGTCTGGGGCATCATGAACAGCTTCATCGGCATCTCGAAGTCGCAGACCACGAACCTCGCGGTC
GTCGCGCCCGGCATTGCCGAGGCGCTGCTCGCCACCGCCATAGGCCTCGTCGCCGCGATCCCCGCCGTGATCATCTACAA
TCACTTCACGCGCGTGACCAAGGGCTACATGGAACTCGTCAACCGCTCCTCCGGCGCCACCGCCCGCATGCTGTCGCGCG
ATCTCGATCGCGGCCAGAGCCACCACACGCCGCAGGGCCGCGGCTTCGAGCCGATCCACGTCCACTCGTCGCCGCCGATG
GCGCTGGCCGCGGAGTAG

Upstream 100 bases:

>100_bases
GAGCCAGACCGCAGCCAGAAGCGCGCAAGGACCGGCTGCCCTGGCTCAGCAGACAGCCGCGCCCGCGCCTTCCGCACCGG
CGGCAGCCACGTCGAAGCAG

Downstream 100 bases:

>100_bases
AGCGACATGGCCGTCTCCCTCTCGGAAGCCGATGGTGACGATGATCCCGGCGAATCCGCCGACATCAACGTCACGCCGTT
CATCGACGTGATCCTGGTGC

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTTGQAAPAAAQAAPAAAATNSAATAPSATAPAANQAPTSASTDAQASSATEAVTDAATDKARDQAEKPGQAAAQAASHV
PHDLSPWSMFLAADILVKSVMMGLALASLATWTVFIAKTVEFAILRRKLRSALRKVDDVRWLSEAKLALGSKQSVLTVLI
DAAMHEIRMSSELPPHGVNERAASSFAEIVRAEGRRCRTGMGLLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAV
VAPGIAEALLATAIGLVAAIPAVIIYNHFTRVTKGYMELVNRSSGATARMLSRDLDRGQSHHTPQGRGFEPIHVHSSPPM
ALAAE

Sequences:

>Translated_325_residues
MTTGQAAPAAAQAAPAAAATNSAATAPSATAPAANQAPTSASTDAQASSATEAVTDAATDKARDQAEKPGQAAAQAASHV
PHDLSPWSMFLAADILVKSVMMGLALASLATWTVFIAKTVEFAILRRKLRSALRKVDDVRWLSEAKLALGSKQSVLTVLI
DAAMHEIRMSSELPPHGVNERAASSFAEIVRAEGRRCRTGMGLLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAV
VAPGIAEALLATAIGLVAAIPAVIIYNHFTRVTKGYMELVNRSSGATARMLSRDLDRGQSHHTPQGRGFEPIHVHSSPPM
ALAAE
>Mature_324_residues
TTGQAAPAAAQAAPAAAATNSAATAPSATAPAANQAPTSASTDAQASSATEAVTDAATDKARDQAEKPGQAAAQAASHVP
HDLSPWSMFLAADILVKSVMMGLALASLATWTVFIAKTVEFAILRRKLRSALRKVDDVRWLSEAKLALGSKQSVLTVLID
AAMHEIRMSSELPPHGVNERAASSFAEIVRAEGRRCRTGMGLLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAVV
APGIAEALLATAIGLVAAIPAVIIYNHFTRVTKGYMELVNRSSGATARMLSRDLDRGQSHHTPQGRGFEPIHVHSSPPMA
LAAE

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1789381, Length=218, Percent_Identity=51.8348623853211, Blast_Score=204, Evalue=4e-54,
Organism=Escherichia coli, GI1786958, Length=203, Percent_Identity=38.423645320197, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014164 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 33768; Mature: 33637

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGQAAPAAAQAAPAAAATNSAATAPSATAPAANQAPTSASTDAQASSATEAVTDAATD
CCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
KARDQAEKPGQAAAQAASHVPHDLSPWSMFLAADILVKSVMMGLALASLATWTVFIAKTV
HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFAILRRKLRSALRKVDDVRWLSEAKLALGSKQSVLTVLIDAAMHEIRMSSELPPHGVNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
RAASSFAEIVRAEGRRCRTGMGLLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAV
HHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VAPGIAEALLATAIGLVAAIPAVIIYNHFTRVTKGYMELVNRSSGATARMLSRDLDRGQS
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
HHTPQGRGFEPIHVHSSPPMALAAE
CCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TTGQAAPAAAQAAPAAAATNSAATAPSATAPAANQAPTSASTDAQASSATEAVTDAATD
CCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH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CCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]