| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343034
Identifier: 146343034
GI number: 146343034
Start: 6460256
End: 6463063
Strand: Direct
Name: 146343034
Synonym: BRADO6222
Alternate gene names: NA
Gene position: 6460256-6463063 (Clockwise)
Preceding gene: 146343033
Following gene: 146343037
Centisome position: 86.64
GC content: 65.14
Gene sequence:
>2808_bases ATGCAAGAAGACAGCGCCCGCGTCCGTGACGCCCTTCCCGGACAGACCCCCGTCTCGCCCGACAACCCCTGCCCTTTCCT GCGCGCGCTCGTCGCCGGCGGGTTCGTCGACGGCCACAGCGTTCCGCTGAAGACAATTGCTCATCAGGTCGAGGCGGCAA GCGGCGAGACCGGGCTCAAGAAGAGGCTCGTCGGCATCGAGACGTTTGGGGTCGCACTGATCGCCAACGGCTTCTCTCCA TTCCGGCTGTTGAAAAGCCTGTTCTCCGGCGCCGATCTGGACCAGTTGCGCAACGGGCCGCTCGACAAGCATGGCGGCGG CTCGCGCATTCTCGATGTGCAAGCCACGGTGCACCCGCAGGAGATCGATCGCTTCGCGAGCTTTGGCAGCGATTATCCCG ATCCCAACGGCGGCACGGAGCGTGGCCTCAATGCGGCGCAGATCCAGGCGTTCATGAAGGCCAATCTGCAGCGCGACGGC GACCACGCGCGCTGGTACTTCCCGATTCTGATGCAGGGCGAGTGGCCGGTGCTGCTGAACATCCTTGGCAAGGGCGAGGG CGAGGACCGCTATCTCGCGGTCGCCGATGTCCATACGCTGTTCGTCGAACGCCGCTTCCCGCAACGTATCGTGGCGCGTC TGATGGCCAAGCCGAAGCCGGCAAGCATCATCTGGCGTATCGGCAAGGCCGTTTTGGGCACCGCGGTGCTTGGCGCCTCG GGGCTGCTTGCCGCCTGGATCGCCGCTCCCGACGCGGTCAATGACAAGCTCATCGCGATCCTGCCGGCGAAGGTCGCCGC CAGCATTCCGCCGGCGCTGCCGCAGGTCGAGCCGACCAAGGCCGCGTATTGGCTTGACCAAGGCTGGACCACCAAGGACC GACACTGGTTCCACCACGTCACGCAGGGTACGGCGACTTTCCCGATTCCCTATGCCTGGTTCATGGCCATGGAGCAGCCT TACGTGTCGCTGTTTGGGACGCCCGGCCTGATCTCCGACAGCGCCTATCTCGAACGCTTCGGCTTCATCCCAAGCCCGAA GAGCGTCGAGGGCGAACCAAGCGCTCTCAGACCCTTTGGCTACGCCGCCAACGCCACCGCCAAGACGGACATCGCCCCGA CATTGCCCGCCGGTCTGAAGCCTATGCCAGCCGGCAATGAAGGCGGTCTGCCGGTCGGCTTCGCTCGGCTCTCCGGTGCC GCCGATCCGGCCACCGGCGCGCCGCAACCGGACAAGATCGGCCTGACCTGCGCCGCCTGTCACACCGGCAGCATCCACTA CAAGGGCGTCAGCGTACGCTTCGATGGCGGCCCCGGCATGGTGGACCTGCGCAAGCTCGAAAAGGCGATGGGCTTCGCGA TGCTCTTGACGCAATACGTGCCGACACGCTTTTCGCGGTTCGCCGATCGCGTGCTCGGGCCGAACGCCACCGACGCCGAT CGTGACACGCTGCGGAAAGGGCTGAAGGCGGCGAGCGACTTCGCATTGACCATGCAGTTGAAGAATTACGCGGAGGCGAT CGAGGCCAAGGGCCAGACCGAGACCGACGAAGGCTTCGGCCGGCTCGATGCGCTGAACCGCATCGGCAATCAGGTGTTTT ATCTCGACATGGCCATCAGCGGGCTGCCGAACATGGTCGGCAATCAGGAGGCCATCGACGCGCCGGTGTCCTATCCGCCG ATCTGGACTGTGCCGTGGTTTTCCTGGGCGCAGTATGACGGCTCGATCTCGCAGCCTTTGATCCGCAATGCAGGCGAGGC GCTCGGCGTCTCGGCGCAGATCAACTTCTCCCCCGAGACGGCGCGCGACAGGCTGTGGCGCTCGTCGATGGCGATCGAGA ACCTCGCGCATATCGAGGACATGCTGCGCGGTCCCGATCCCTTCGCGACGACGACACCGGCCTTCGGTGGCCTCATCTCG CCGAAATGGCCGGAGAAACTGTTCGCCGACGACGAGGCCTGGAAGATCGATCCGGCCCGCGTCGAGCGCGGCCGCAAGCT CTATGCAAGCGTCTGCGTCGAGTGCCATCTCGGCCCCGTCGCCGACCCCGTGTTCGACAAGACCTATCCGGACAAGAGCT TCTGGAAGATCAAGTCGGCCGACGACTGGGAGCGCCATGGCTGGAATGCCAAGGGACCGATCCTGAATCTCGTGCAGAAG CCGGTCGAGGTGATGCAGACCGATCCCGGACAGGCCAGCATTCTTGCCAATCGCAAGGTCAGGGTGCCGGGCTTCCTCGA CGTCGATCCGGCCAAGGACCTGAAGGGCTGCAAGCTGTCCGAGGGCTCGACCACCGACATGTCCTACGCGCTGGCACTGA TGGCCGTCGTGCAGAAGGCGAGCGACAAATGGATGGAGGACCGCAAGCTCTCTCCCGCCGACCAGGCCGCGCTGTGGGGT GACCGGCCGAATTGCCCGAATCCGGCCAGCAACACCTATCGCGCCCGTCCGCTGAACGGGGTCTGGGCGACCGCACCTTA TCTTCACAACGGCTCGGTGCCCTCGCTGTACTGGCTGCTGACGCCGGCGGCGGAGCGGCCGAGCTCGTTCTGCCAGGGTG CCCGTGACTATGATCCCGTCCATGTCGGCTTCGACGTGCCGAAGGGCGGGGAGGCGGCGTGCAAGGTCGGGCAGTCGCGG TTCATGGCCACGGATCCCAGCGGCAAGCCGATCAAGGGCAACAGTACGTTGGGCCATTCCTTCGAGGGTCCGACCCGGCC CAACAAGGATTATCCGAATGGCATCATCGGCGGCGCCTTCTCCGAGGAGGAGCGCTGGGACCTGATCGCGTATCTGAAGA CGCTGTGA
Upstream 100 bases:
>100_bases GCGTGCGCCTCGCACGCCCTTCGGCGCAATTCGGCGCCGCCATTGTTTGTTTGCGTGATCTTCGATTTTCATCACAGGTG CTTTGCAAGGATGTCGTTCG
Downstream 100 bases:
>100_bases GCCGATCATCCGGCGCGCCTCGCGGGCGGCGAGGCGCGCCGGCGTCGTCATGCGCTCCTCCATTCGCCGGGACGGACGCA GCGGCGTATCGTTCCCTGGT
Product: putative cytochrome c region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 935; Mature: 935
Protein sequence:
>935_residues MQEDSARVRDALPGQTPVSPDNPCPFLRALVAGGFVDGHSVPLKTIAHQVEAASGETGLKKRLVGIETFGVALIANGFSP FRLLKSLFSGADLDQLRNGPLDKHGGGSRILDVQATVHPQEIDRFASFGSDYPDPNGGTERGLNAAQIQAFMKANLQRDG DHARWYFPILMQGEWPVLLNILGKGEGEDRYLAVADVHTLFVERRFPQRIVARLMAKPKPASIIWRIGKAVLGTAVLGAS GLLAAWIAAPDAVNDKLIAILPAKVAASIPPALPQVEPTKAAYWLDQGWTTKDRHWFHHVTQGTATFPIPYAWFMAMEQP YVSLFGTPGLISDSAYLERFGFIPSPKSVEGEPSALRPFGYAANATAKTDIAPTLPAGLKPMPAGNEGGLPVGFARLSGA ADPATGAPQPDKIGLTCAACHTGSIHYKGVSVRFDGGPGMVDLRKLEKAMGFAMLLTQYVPTRFSRFADRVLGPNATDAD RDTLRKGLKAASDFALTMQLKNYAEAIEAKGQTETDEGFGRLDALNRIGNQVFYLDMAISGLPNMVGNQEAIDAPVSYPP IWTVPWFSWAQYDGSISQPLIRNAGEALGVSAQINFSPETARDRLWRSSMAIENLAHIEDMLRGPDPFATTTPAFGGLIS PKWPEKLFADDEAWKIDPARVERGRKLYASVCVECHLGPVADPVFDKTYPDKSFWKIKSADDWERHGWNAKGPILNLVQK PVEVMQTDPGQASILANRKVRVPGFLDVDPAKDLKGCKLSEGSTTDMSYALALMAVVQKASDKWMEDRKLSPADQAALWG DRPNCPNPASNTYRARPLNGVWATAPYLHNGSVPSLYWLLTPAAERPSSFCQGARDYDPVHVGFDVPKGGEAACKVGQSR FMATDPSGKPIKGNSTLGHSFEGPTRPNKDYPNGIIGGAFSEEERWDLIAYLKTL
Sequences:
>Translated_935_residues MQEDSARVRDALPGQTPVSPDNPCPFLRALVAGGFVDGHSVPLKTIAHQVEAASGETGLKKRLVGIETFGVALIANGFSP FRLLKSLFSGADLDQLRNGPLDKHGGGSRILDVQATVHPQEIDRFASFGSDYPDPNGGTERGLNAAQIQAFMKANLQRDG DHARWYFPILMQGEWPVLLNILGKGEGEDRYLAVADVHTLFVERRFPQRIVARLMAKPKPASIIWRIGKAVLGTAVLGAS GLLAAWIAAPDAVNDKLIAILPAKVAASIPPALPQVEPTKAAYWLDQGWTTKDRHWFHHVTQGTATFPIPYAWFMAMEQP YVSLFGTPGLISDSAYLERFGFIPSPKSVEGEPSALRPFGYAANATAKTDIAPTLPAGLKPMPAGNEGGLPVGFARLSGA ADPATGAPQPDKIGLTCAACHTGSIHYKGVSVRFDGGPGMVDLRKLEKAMGFAMLLTQYVPTRFSRFADRVLGPNATDAD RDTLRKGLKAASDFALTMQLKNYAEAIEAKGQTETDEGFGRLDALNRIGNQVFYLDMAISGLPNMVGNQEAIDAPVSYPP IWTVPWFSWAQYDGSISQPLIRNAGEALGVSAQINFSPETARDRLWRSSMAIENLAHIEDMLRGPDPFATTTPAFGGLIS PKWPEKLFADDEAWKIDPARVERGRKLYASVCVECHLGPVADPVFDKTYPDKSFWKIKSADDWERHGWNAKGPILNLVQK PVEVMQTDPGQASILANRKVRVPGFLDVDPAKDLKGCKLSEGSTTDMSYALALMAVVQKASDKWMEDRKLSPADQAALWG DRPNCPNPASNTYRARPLNGVWATAPYLHNGSVPSLYWLLTPAAERPSSFCQGARDYDPVHVGFDVPKGGEAACKVGQSR FMATDPSGKPIKGNSTLGHSFEGPTRPNKDYPNGIIGGAFSEEERWDLIAYLKTL >Mature_935_residues MQEDSARVRDALPGQTPVSPDNPCPFLRALVAGGFVDGHSVPLKTIAHQVEAASGETGLKKRLVGIETFGVALIANGFSP FRLLKSLFSGADLDQLRNGPLDKHGGGSRILDVQATVHPQEIDRFASFGSDYPDPNGGTERGLNAAQIQAFMKANLQRDG DHARWYFPILMQGEWPVLLNILGKGEGEDRYLAVADVHTLFVERRFPQRIVARLMAKPKPASIIWRIGKAVLGTAVLGAS GLLAAWIAAPDAVNDKLIAILPAKVAASIPPALPQVEPTKAAYWLDQGWTTKDRHWFHHVTQGTATFPIPYAWFMAMEQP YVSLFGTPGLISDSAYLERFGFIPSPKSVEGEPSALRPFGYAANATAKTDIAPTLPAGLKPMPAGNEGGLPVGFARLSGA ADPATGAPQPDKIGLTCAACHTGSIHYKGVSVRFDGGPGMVDLRKLEKAMGFAMLLTQYVPTRFSRFADRVLGPNATDAD RDTLRKGLKAASDFALTMQLKNYAEAIEAKGQTETDEGFGRLDALNRIGNQVFYLDMAISGLPNMVGNQEAIDAPVSYPP IWTVPWFSWAQYDGSISQPLIRNAGEALGVSAQINFSPETARDRLWRSSMAIENLAHIEDMLRGPDPFATTTPAFGGLIS PKWPEKLFADDEAWKIDPARVERGRKLYASVCVECHLGPVADPVFDKTYPDKSFWKIKSADDWERHGWNAKGPILNLVQK PVEVMQTDPGQASILANRKVRVPGFLDVDPAKDLKGCKLSEGSTTDMSYALALMAVVQKASDKWMEDRKLSPADQAALWG DRPNCPNPASNTYRARPLNGVWATAPYLHNGSVPSLYWLLTPAAERPSSFCQGARDYDPVHVGFDVPKGGEAACKVGQSR FMATDPSGKPIKGNSTLGHSFEGPTRPNKDYPNGIIGGAFSEEERWDLIAYLKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101476; Mature: 101476
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEDSARVRDALPGQTPVSPDNPCPFLRALVAGGFVDGHSVPLKTIAHQVEAASGETGLK CCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHH KRLVGIETFGVALIANGFSPFRLLKSLFSGADLDQLRNGPLDKHGGGSRILDVQATVHPQ HHHHHHHHHCCHHEECCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEEEECCCHH EIDRFASFGSDYPDPNGGTERGLNAAQIQAFMKANLQRDGDHARWYFPILMQGEWPVLLN HHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEE ILGKGEGEDRYLAVADVHTLFVERRFPQRIVARLMAKPKPASIIWRIGKAVLGTAVLGAS EECCCCCCCCEEEEHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH GLLAAWIAAPDAVNDKLIAILPAKVAASIPPALPQVEPTKAAYWLDQGWTTKDRHWFHHV HHHHHHHHCCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH TQGTATFPIPYAWFMAMEQPYVSLFGTPGLISDSAYLERFGFIPSPKSVEGEPSALRPFG HCCCCCCCCHHHHHHHHCCCHHEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC YAANATAKTDIAPTLPAGLKPMPAGNEGGLPVGFARLSGAADPATGAPQPDKIGLTCAAC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCEEEEEE HTGSIHYKGVSVRFDGGPGMVDLRKLEKAMGFAMLLTQYVPTRFSRFADRVLGPNATDAD CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RDTLRKGLKAASDFALTMQLKNYAEAIEAKGQTETDEGFGRLDALNRIGNQVFYLDMAIS HHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEHHH GLPNMVGNQEAIDAPVSYPPIWTVPWFSWAQYDGSISQPLIRNAGEALGVSAQINFSPET CCCCCCCCCHHCCCCCCCCCEEECCCCHHHHCCCCCCCHHHHCCCHHCCEEEEEECCCHH ARDRLWRSSMAIENLAHIEDMLRGPDPFATTTPAFGGLISPKWPEKLFADDEAWKIDPAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH VERGRKLYASVCVECHLGPVADPVFDKTYPDKSFWKIKSADDWERHGWNAKGPILNLVQK HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEECCCCCHHHCCCCCCCHHHHHHHH PVEVMQTDPGQASILANRKVRVPGFLDVDPAKDLKGCKLSEGSTTDMSYALALMAVVQKA HHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SDKWMEDRKLSPADQAALWGDRPNCPNPASNTYRARPLNGVWATAPYLHNGSVPSLYWLL HHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCEECCCEEECCCCCEEEEEE TPAAERPSSFCQGARDYDPVHVGFDVPKGGEAACKVGQSRFMATDPSGKPIKGNSTLGHS CCCCCCCHHHHCCCCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCC FEGPTRPNKDYPNGIIGGAFSEEERWDLIAYLKTL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MQEDSARVRDALPGQTPVSPDNPCPFLRALVAGGFVDGHSVPLKTIAHQVEAASGETGLK CCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHH KRLVGIETFGVALIANGFSPFRLLKSLFSGADLDQLRNGPLDKHGGGSRILDVQATVHPQ HHHHHHHHHCCHHEECCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEEEECCCHH EIDRFASFGSDYPDPNGGTERGLNAAQIQAFMKANLQRDGDHARWYFPILMQGEWPVLLN HHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEE ILGKGEGEDRYLAVADVHTLFVERRFPQRIVARLMAKPKPASIIWRIGKAVLGTAVLGAS EECCCCCCCCEEEEHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH GLLAAWIAAPDAVNDKLIAILPAKVAASIPPALPQVEPTKAAYWLDQGWTTKDRHWFHHV HHHHHHHHCCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH TQGTATFPIPYAWFMAMEQPYVSLFGTPGLISDSAYLERFGFIPSPKSVEGEPSALRPFG HCCCCCCCCHHHHHHHHCCCHHEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC YAANATAKTDIAPTLPAGLKPMPAGNEGGLPVGFARLSGAADPATGAPQPDKIGLTCAAC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCEEEEEE HTGSIHYKGVSVRFDGGPGMVDLRKLEKAMGFAMLLTQYVPTRFSRFADRVLGPNATDAD CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RDTLRKGLKAASDFALTMQLKNYAEAIEAKGQTETDEGFGRLDALNRIGNQVFYLDMAIS HHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEHHH GLPNMVGNQEAIDAPVSYPPIWTVPWFSWAQYDGSISQPLIRNAGEALGVSAQINFSPET CCCCCCCCCHHCCCCCCCCCEEECCCCHHHHCCCCCCCHHHHCCCHHCCEEEEEECCCHH ARDRLWRSSMAIENLAHIEDMLRGPDPFATTTPAFGGLISPKWPEKLFADDEAWKIDPAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH VERGRKLYASVCVECHLGPVADPVFDKTYPDKSFWKIKSADDWERHGWNAKGPILNLVQK HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEECCCCCHHHCCCCCCCHHHHHHHH PVEVMQTDPGQASILANRKVRVPGFLDVDPAKDLKGCKLSEGSTTDMSYALALMAVVQKA HHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SDKWMEDRKLSPADQAALWGDRPNCPNPASNTYRARPLNGVWATAPYLHNGSVPSLYWLL HHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCEECCCEEECCCCCEEEEEE TPAAERPSSFCQGARDYDPVHVGFDVPKGGEAACKVGQSRFMATDPSGKPIKGNSTLGHS CCCCCCCHHHHCCCCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCC FEGPTRPNKDYPNGIIGGAFSEEERWDLIAYLKTL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]