| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cya3 [H]
Identifier: 146343033
GI number: 146343033
Start: 6458290
End: 6460098
Strand: Direct
Name: cya3 [H]
Synonym: BRADO6221
Alternate gene names: 146343033
Gene position: 6458290-6460098 (Clockwise)
Preceding gene: 146343032
Following gene: 146343034
Centisome position: 86.61
GC content: 63.9
Gene sequence:
>1809_bases ATGGAGAGACGGCTGGCCGCCATTGTCTGTGCCGATGTGGTCGGTTACTCGCGGATGATGGGCGCCGACGAGGCGGGAAC CCATGCCGCCTTCAAGGCTCATCGCGGCGCCATTCACCCGGTCATTCTCAATCACGGTGGCCGCATCGTAAAATACACCG GAGACGGTTTTCTGCTGGAGTTTCCAAGCGTCGTCGGCGCGATCGCGGCTGCTGTCGAGGTGCAGAAGCTGATGGCCGAG CGCAACGCGCATCTGCCAGCCGACCGGATGATGCAGTTCCGCCTCGGCGTGAACATGGGCGATGTCATCTTCGACGAGGA CGAGGTGTTCGGCGACGGCGTCAACACCGCGGTGCGACTTGAAGCCGCAGCTCCTCCCGGAGGGATCGCACTGTCGAACA AGGCCTACCAGGAAGCCAGCAAACATCTGACCGTCACGTTCGTCGATCGCGGCCCCTTCCGTTTCAAGAACATTGAAGAG ACCATCAACGTCTGGACCTGGGACCCCTCCTCGCCGGAGCAGAGCCGTGAGCCGCGGCAGACCACGTCCTTGCCGGCGCA ATACCGGACGGCCATCGTCGGTGTTCTGCCCTTCGCCAACCTCAGTAGCGAGACCGACGAGTACTTCTCGGACGGCTTGG CCGAAGACCTCATTCACGCGCTGTCGCTACAATCCTTCTTCCGGGTGCTGAGCCGCAACTCGACCTTCGCCTTCAAGCAT GCGGGCATGAGCGCCAGGCTGATCGCCCGCGAGATCGACGCGACCTATCTGATTCAGGGATCGGTTCGGCGCTCCGGGAA CAAGATCAGAGTCACGGCCGAGCTGGTCGCGCCGGAGAATGGCGAGCAGCTGTGGGCCGGCCGCTATGACCGTGACATCG GCGACCTGTTTGCCGTGCAGGACGACATCACCGCCAATCTGTGCACCGCGCTGATCCCCGAGATCTACCGCGCCGAGGCG GCGGTGCCGGTCCGGTCGATGACCACCGACCTCACCGCCTGGGACCGCTTCCTGCGCGGCTTGTCGCACTACTATCAGCC GACCAAGGCCGACTATGAGAGCTCGATCGCGCTGTTCCGCGAGGCCATCAAGATCGACCCTGGACTGGCGATCGCCCACA CCTATCTCGGCACCATCCTGCTGCAGGGCATCCATTTCGGCTGGATCAGAAACTCTCGGGAGCTGTGGGACGAGGCGATG ACACTCGCCGAGGCGAGCGTGCGGCTCGACCCCCGCTCCTCCTTCTCCTATTCGCTGCTGGCCTATGTCCATGCCATGCA GGGACGAGTCGAGGCGGGCATCGACGGGGCGCGCAAGGCGCTGCAGCTCAACCCTTACGACATGGGCGCGCGCGGCGTGC TCGGCGTGTGCCATCTCGTCGGCGGCGAGCACCGCGAGGCCATCGAGCTGTTCTCCGTGGCGGCGCAACGCGGCAACAGC GATCCGCGCTATCAGTGGTCGGTGCTCAGCGCCTTCAGTCACTACATGCTCGGCCAATATGATGCCTCGCTATCCTGGGC GCGGGAGTCGCACTATCAGAACCCCAACCATCTGCAGTGCCTCGCCATTCGTGCGGCGGCACTTGCGCAGCTCGGGCGCT CGGTCGAAGCCGGTGAGGCCGTCGCCGCGCTGTTGAGTCAGCATCCGTGGATGACGATCGAGCGGCTTCTGAGCAACATC CGCTGGCGCAATCCGGCGGACATTGCTCATTATCGCGACGGACTGGCCAAGGCCGGCTTGCCTCTGACCAAGCTGACCTT GGTCGACAGCAAGCCGAATGCGCGGGCGAATAACGCAATCTCGACTTGA
Upstream 100 bases:
>100_bases GATCCCTTGACCCGCCACATGGCCCGCACATTGCTTCCGCAAATTGATTGGATTCAAACGATGCTGCCGTGGTATCGCCC TCTATCAGAGTGAGGAACGG
Downstream 100 bases:
>100_bases GGTTGACACGGCGGCGGGGTACGCCATCATTCACGATTGCATTGTAACGTTCAGACGGCGTGCGCCTCGCACGCCCTTCG GCGCAATTCGGCGCCGCCAT
Product: putative adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MERRLAAIVCADVVGYSRMMGADEAGTHAAFKAHRGAIHPVILNHGGRIVKYTGDGFLLEFPSVVGAIAAAVEVQKLMAE RNAHLPADRMMQFRLGVNMGDVIFDEDEVFGDGVNTAVRLEAAAPPGGIALSNKAYQEASKHLTVTFVDRGPFRFKNIEE TINVWTWDPSSPEQSREPRQTTSLPAQYRTAIVGVLPFANLSSETDEYFSDGLAEDLIHALSLQSFFRVLSRNSTFAFKH AGMSARLIAREIDATYLIQGSVRRSGNKIRVTAELVAPENGEQLWAGRYDRDIGDLFAVQDDITANLCTALIPEIYRAEA AVPVRSMTTDLTAWDRFLRGLSHYYQPTKADYESSIALFREAIKIDPGLAIAHTYLGTILLQGIHFGWIRNSRELWDEAM TLAEASVRLDPRSSFSYSLLAYVHAMQGRVEAGIDGARKALQLNPYDMGARGVLGVCHLVGGEHREAIELFSVAAQRGNS DPRYQWSVLSAFSHYMLGQYDASLSWARESHYQNPNHLQCLAIRAAALAQLGRSVEAGEAVAALLSQHPWMTIERLLSNI RWRNPADIAHYRDGLAKAGLPLTKLTLVDSKPNARANNAIST
Sequences:
>Translated_602_residues MERRLAAIVCADVVGYSRMMGADEAGTHAAFKAHRGAIHPVILNHGGRIVKYTGDGFLLEFPSVVGAIAAAVEVQKLMAE RNAHLPADRMMQFRLGVNMGDVIFDEDEVFGDGVNTAVRLEAAAPPGGIALSNKAYQEASKHLTVTFVDRGPFRFKNIEE TINVWTWDPSSPEQSREPRQTTSLPAQYRTAIVGVLPFANLSSETDEYFSDGLAEDLIHALSLQSFFRVLSRNSTFAFKH AGMSARLIAREIDATYLIQGSVRRSGNKIRVTAELVAPENGEQLWAGRYDRDIGDLFAVQDDITANLCTALIPEIYRAEA AVPVRSMTTDLTAWDRFLRGLSHYYQPTKADYESSIALFREAIKIDPGLAIAHTYLGTILLQGIHFGWIRNSRELWDEAM TLAEASVRLDPRSSFSYSLLAYVHAMQGRVEAGIDGARKALQLNPYDMGARGVLGVCHLVGGEHREAIELFSVAAQRGNS DPRYQWSVLSAFSHYMLGQYDASLSWARESHYQNPNHLQCLAIRAAALAQLGRSVEAGEAVAALLSQHPWMTIERLLSNI RWRNPADIAHYRDGLAKAGLPLTKLTLVDSKPNARANNAIST >Mature_602_residues MERRLAAIVCADVVGYSRMMGADEAGTHAAFKAHRGAIHPVILNHGGRIVKYTGDGFLLEFPSVVGAIAAAVEVQKLMAE RNAHLPADRMMQFRLGVNMGDVIFDEDEVFGDGVNTAVRLEAAAPPGGIALSNKAYQEASKHLTVTFVDRGPFRFKNIEE TINVWTWDPSSPEQSREPRQTTSLPAQYRTAIVGVLPFANLSSETDEYFSDGLAEDLIHALSLQSFFRVLSRNSTFAFKH AGMSARLIAREIDATYLIQGSVRRSGNKIRVTAELVAPENGEQLWAGRYDRDIGDLFAVQDDITANLCTALIPEIYRAEA AVPVRSMTTDLTAWDRFLRGLSHYYQPTKADYESSIALFREAIKIDPGLAIAHTYLGTILLQGIHFGWIRNSRELWDEAM TLAEASVRLDPRSSFSYSLLAYVHAMQGRVEAGIDGARKALQLNPYDMGARGVLGVCHLVGGEHREAIELFSVAAQRGNS DPRYQWSVLSAFSHYMLGQYDASLSWARESHYQNPNHLQCLAIRAAALAQLGRSVEAGEAVAALLSQHPWMTIERLLSNI RWRNPADIAHYRDGLAKAGLPLTKLTLVDSKPNARANNAIST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 66397; Mature: 66397
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRLAAIVCADVVGYSRMMGADEAGTHAAFKAHRGAIHPVILNHGGRIVKYTGDGFLLE CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECCCCEEEE FPSVVGAIAAAVEVQKLMAERNAHLPADRMMQFRLGVNMGDVIFDEDEVFGDGVNTAVRL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCHHCCCCCCCEEEE EAAAPPGGIALSNKAYQEASKHLTVTFVDRGPFRFKNIEETINVWTWDPSSPEQSREPRQ EECCCCCCEEECCHHHHHHHCCEEEEEEECCCCCCCCHHHCEEEEEECCCCCHHCCCCCH TTSLPAQYRTAIVGVLPFANLSSETDEYFSDGLAEDLIHALSLQSFFRVLSRNSTFAFKH HCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE AGMSARLIAREIDATYLIQGSVRRSGNKIRVTAELVAPENGEQLWAGRYDRDIGDLFAVQ CCCCHHHHHHHCCEEEEEECHHHCCCCEEEEEEEEECCCCCCEEECCCCCCCHHHHHHCC DDITANLCTALIPEIYRAEAAVPVRSMTTDLTAWDRFLRGLSHYYQPTKADYESSIALFR CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EAIKIDPGLAIAHTYLGTILLQGIHFGWIRNSRELWDEAMTLAEASVRLDPRSSFSYSLL HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHH AYVHAMQGRVEAGIDGARKALQLNPYDMGARGVLGVCHLVGGEHREAIELFSVAAQRGNS HHHHHHHCCHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC DPRYQWSVLSAFSHYMLGQYDASLSWARESHYQNPNHLQCLAIRAAALAQLGRSVEAGEA CCCEEHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH VAALLSQHPWMTIERLLSNIRWRNPADIAHYRDGLAKAGLPLTKLTLVDSKPNARANNAI HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC ST CC >Mature Secondary Structure MERRLAAIVCADVVGYSRMMGADEAGTHAAFKAHRGAIHPVILNHGGRIVKYTGDGFLLE CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECCCCEEEE FPSVVGAIAAAVEVQKLMAERNAHLPADRMMQFRLGVNMGDVIFDEDEVFGDGVNTAVRL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCHHCCCCCCCEEEE EAAAPPGGIALSNKAYQEASKHLTVTFVDRGPFRFKNIEETINVWTWDPSSPEQSREPRQ EECCCCCCEEECCHHHHHHHCCEEEEEEECCCCCCCCHHHCEEEEEECCCCCHHCCCCCH TTSLPAQYRTAIVGVLPFANLSSETDEYFSDGLAEDLIHALSLQSFFRVLSRNSTFAFKH HCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE AGMSARLIAREIDATYLIQGSVRRSGNKIRVTAELVAPENGEQLWAGRYDRDIGDLFAVQ CCCCHHHHHHHCCEEEEEECHHHCCCCEEEEEEEEECCCCCCEEECCCCCCCHHHHHHCC DDITANLCTALIPEIYRAEAAVPVRSMTTDLTAWDRFLRGLSHYYQPTKADYESSIALFR CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EAIKIDPGLAIAHTYLGTILLQGIHFGWIRNSRELWDEAMTLAEASVRLDPRSSFSYSLL HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHH AYVHAMQGRVEAGIDGARKALQLNPYDMGARGVLGVCHLVGGEHREAIELFSVAAQRGNS HHHHHHHCCHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC DPRYQWSVLSAFSHYMLGQYDASLSWARESHYQNPNHLQCLAIRAAALAQLGRSVEAGEA CCCEEHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH VAALLSQHPWMTIERLLSNIRWRNPADIAHYRDGLAKAGLPLTKLTLVDSKPNARANNAI HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC ST CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]