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The map label for this gene is 146343003

Identifier: 146343003

GI number: 146343003

Start: 6416208

End: 6417611

Strand: Reverse

Name: 146343003

Synonym: BRADO6188

Alternate gene names: NA

Gene position: 6417611-6416208 (Counterclockwise)

Preceding gene: 146343004

Following gene: 146343002

Centisome position: 86.07

GC content: 65.46

Gene sequence:

>1404_bases
ATGTCACCGCCCGATTCCGTCAGGAGTGCTCACGACGGTCGCCAGCGCAGGCTGCTGATCGTGCTGGCTCTGGGATTTAT
CGCCTTTGGCGCTGCTGCGGCCGGGCTGTTCTACGTGTTGCAGCCGGATACTCTCCGGATCGCCGTTGGACCGGCCGGAA
GCGACGACCACCGGGTGGTGCAGGCGATGGCCGACGCCTTCGCCGAGGAAAGCAGGACCGTCAGGCTCTCTCCGGTCACG
ACCGCGGGGGCCGCCGAATCTCTTGCCCTGCTGACTTCGGACAAGACCGACCTCGCCATCGGCCGCGGCGATCTCAGCAT
GCCGCCCGACGCGCAGACACTGGCGGTGCTGCGAAAGAACTATGTCGTGCTGTGGTCGTCTTCGGGACGTCGTGGCGACG
AGCCCCGGAAGAAGGCCAACGGCAAGATCGGAGAGATTGCCCAACTGGCTGGTCACAAGGTCGGCATCGTCGGCAAGACG
GGCGCGAACGTCGCCGTCCTCCAGGCCATTCTCGAGGGCTCAGGCGTGGCGCCAGACAAGGTCGCCACGGCGCAATTCGG
GACGGACGAGATCGACAAGCTTGCGCAAGACCCGACCCTCGACGCGTATCTCGCCGTCGGTCCGCTCGACAGCAAGATCA
CGGCGGATGCCATCGCCGCGACCGCCCGGGCGCGCGGAGCTCCGACGTTCCTTCCCATCGATGCCTCCGAAGCCATTGCG
CTGAAGCACCCGCGCTACGAGGCGGAGGAAATTCCGGCCAGCGTCTTCAGCGCGAAACCGGCCTGGCCGGAGGACAAGGT
CGACACGATCAGCGTGAACCATCTGATTCTGGCCAAGAAGGAATTGTCGGAAGCCAGGGCGGCGGCCTTCTTCCGGCAGC
TCTTCGCGGTCCGCGACACGATCACGCAAGGTCTCGCCGGCGCCGCCCACATCGCGAAGCCCGATACCGAGAAGGAGACC
GAACCATCCGTGCATCGCGGCGCCGCGGCGGTGATCAACGGCACCGAGCGAACCTTTCTGGACAAATACAGCGACTACTT
CTGGTTTGCCCTGCTCGTTCTCTCCGGCCTCGGTTCGGCCGCCGAATGGCTGCGCCGCTATCTGAATCGGGATGAGCCGG
ACGACGACACCAGCCGCCGCAGCCGCGTTCTCGCCGCGGTGTCCGAGGTTCGCAATGCCGCGTCTGAGCAGGATCTGCTG
ACATGGCAACGCGAGGTCGACGCGATCATCGTCGAGACTCTCAAGGGCTATGACGACGGCGCCATCGACCAGGACGACCT
GAGCGCATTCAGCCTGGTGCTCGAGTTGTTCAACCACGCCGTTGCCGAGAGGCGAGCGACGCTGCAGAGCGGCGCCGCCG
ATCAGCCATGGACAACAGGTCCAACTCTCGCCTCCAGGCGATAG

Upstream 100 bases:

>100_bases
CTCTCTCGACCTGGCGGAACATTGCAGACGGCCATCGGTTCCCCCAAGTTCCCAGCATGCATGTCGCCCAACTGACGTTG
CTCTTAAGAGGGGTCTGCCG

Downstream 100 bases:

>100_bases
GGCGGGGCCTGACGAGGATCATCGGCGCGTCGGCCTGCGGCAATCGGACGTCTGCTTCTGGGGATCAACCGTGGGTCGCC
CATCATCGGACCAAGCACTG

Product: putative transport system, periplasmic component

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TAXI Family TRAP Transporter Solute Receptor; Transmembrane Component; Transport System Periplasmic Component; Signal Peptide; Trap Transporter Solute Receptor Taxi Family; TRAP-Type Transport System

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSPPDSVRSAHDGRQRRLLIVLALGFIAFGAAAAGLFYVLQPDTLRIAVGPAGSDDHRVVQAMADAFAEESRTVRLSPVT
TAGAAESLALLTSDKTDLAIGRGDLSMPPDAQTLAVLRKNYVVLWSSSGRRGDEPRKKANGKIGEIAQLAGHKVGIVGKT
GANVAVLQAILEGSGVAPDKVATAQFGTDEIDKLAQDPTLDAYLAVGPLDSKITADAIAATARARGAPTFLPIDASEAIA
LKHPRYEAEEIPASVFSAKPAWPEDKVDTISVNHLILAKKELSEARAAAFFRQLFAVRDTITQGLAGAAHIAKPDTEKET
EPSVHRGAAAVINGTERTFLDKYSDYFWFALLVLSGLGSAAEWLRRYLNRDEPDDDTSRRSRVLAAVSEVRNAASEQDLL
TWQREVDAIIVETLKGYDDGAIDQDDLSAFSLVLELFNHAVAERRATLQSGAADQPWTTGPTLASRR

Sequences:

>Translated_467_residues
MSPPDSVRSAHDGRQRRLLIVLALGFIAFGAAAAGLFYVLQPDTLRIAVGPAGSDDHRVVQAMADAFAEESRTVRLSPVT
TAGAAESLALLTSDKTDLAIGRGDLSMPPDAQTLAVLRKNYVVLWSSSGRRGDEPRKKANGKIGEIAQLAGHKVGIVGKT
GANVAVLQAILEGSGVAPDKVATAQFGTDEIDKLAQDPTLDAYLAVGPLDSKITADAIAATARARGAPTFLPIDASEAIA
LKHPRYEAEEIPASVFSAKPAWPEDKVDTISVNHLILAKKELSEARAAAFFRQLFAVRDTITQGLAGAAHIAKPDTEKET
EPSVHRGAAAVINGTERTFLDKYSDYFWFALLVLSGLGSAAEWLRRYLNRDEPDDDTSRRSRVLAAVSEVRNAASEQDLL
TWQREVDAIIVETLKGYDDGAIDQDDLSAFSLVLELFNHAVAERRATLQSGAADQPWTTGPTLASRR
>Mature_466_residues
SPPDSVRSAHDGRQRRLLIVLALGFIAFGAAAAGLFYVLQPDTLRIAVGPAGSDDHRVVQAMADAFAEESRTVRLSPVTT
AGAAESLALLTSDKTDLAIGRGDLSMPPDAQTLAVLRKNYVVLWSSSGRRGDEPRKKANGKIGEIAQLAGHKVGIVGKTG
ANVAVLQAILEGSGVAPDKVATAQFGTDEIDKLAQDPTLDAYLAVGPLDSKITADAIAATARARGAPTFLPIDASEAIAL
KHPRYEAEEIPASVFSAKPAWPEDKVDTISVNHLILAKKELSEARAAAFFRQLFAVRDTITQGLAGAAHIAKPDTEKETE
PSVHRGAAAVINGTERTFLDKYSDYFWFALLVLSGLGSAAEWLRRYLNRDEPDDDTSRRSRVLAAVSEVRNAASEQDLLT
WQREVDAIIVETLKGYDDGAIDQDDLSAFSLVLELFNHAVAERRATLQSGAADQPWTTGPTLASRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49983; Mature: 49851

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPDSVRSAHDGRQRRLLIVLALGFIAFGAAAAGLFYVLQPDTLRIAVGPAGSDDHRVV
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCCHHHHH
QAMADAFAEESRTVRLSPVTTAGAAESLALLTSDKTDLAIGRGDLSMPPDAQTLAVLRKN
HHHHHHHHHCCCEEEECCCCCCCCHHHEEEEECCCCCEEECCCCCCCCCCHHHHHHHHCC
YVVLWSSSGRRGDEPRKKANGKIGEIAQLAGHKVGIVGKTGANVAVLQAILEGSGVAPDK
EEEEECCCCCCCCCHHHHHCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
VATAQFGTDEIDKLAQDPTLDAYLAVGPLDSKITADAIAATARARGAPTFLPIDASEAIA
CCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCEE
LKHPRYEAEEIPASVFSAKPAWPEDKVDTISVNHLILAKKELSEARAAAFFRQLFAVRDT
ECCCCCCHHHCCHHHHCCCCCCCCCCCCEEEECEEEEEHHHHHHHHHHHHHHHHHHHHHH
ITQGLAGAAHIAKPDTEKETEPSVHRGAAAVINGTERTFLDKYSDYFWFALLVLSGLGSA
HHHHHCCCHHCCCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHH
AEWLRRYLNRDEPDDDTSRRSRVLAAVSEVRNAASEQDLLTWQREVDAIIVETLKGYDDG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
AIDQDDLSAFSLVLELFNHAVAERRATLQSGAADQPWTTGPTLASRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPPDSVRSAHDGRQRRLLIVLALGFIAFGAAAAGLFYVLQPDTLRIAVGPAGSDDHRVV
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCCHHHHH
QAMADAFAEESRTVRLSPVTTAGAAESLALLTSDKTDLAIGRGDLSMPPDAQTLAVLRKN
HHHHHHHHHCCCEEEECCCCCCCCHHHEEEEECCCCCEEECCCCCCCCCCHHHHHHHHCC
YVVLWSSSGRRGDEPRKKANGKIGEIAQLAGHKVGIVGKTGANVAVLQAILEGSGVAPDK
EEEEECCCCCCCCCHHHHHCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
VATAQFGTDEIDKLAQDPTLDAYLAVGPLDSKITADAIAATARARGAPTFLPIDASEAIA
CCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCEE
LKHPRYEAEEIPASVFSAKPAWPEDKVDTISVNHLILAKKELSEARAAAFFRQLFAVRDT
ECCCCCCHHHCCHHHHCCCCCCCCCCCCEEEECEEEEEHHHHHHHHHHHHHHHHHHHHHH
ITQGLAGAAHIAKPDTEKETEPSVHRGAAAVINGTERTFLDKYSDYFWFALLVLSGLGSA
HHHHHCCCHHCCCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHH
AEWLRRYLNRDEPDDDTSRRSRVLAAVSEVRNAASEQDLLTWQREVDAIIVETLKGYDDG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
AIDQDDLSAFSLVLELFNHAVAERRATLQSGAADQPWTTGPTLASRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA