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The map label for this gene is ompR [H]

Identifier: 146342541

GI number: 146342541

Start: 5906014

End: 5906754

Strand: Direct

Name: ompR [H]

Synonym: BRADO5703

Alternate gene names: 146342541

Gene position: 5906014-5906754 (Clockwise)

Preceding gene: 146342540

Following gene: 146342542

Centisome position: 79.21

GC content: 66.94

Gene sequence:

>741_bases
ATGGCCCAGACACAACCCCACATCCTTGTCGTCGAGGACGACCGCGAGACGCGCACGCTGATCGCGAAATATCTGCGCAA
CAACGCCTGCAACGTGACCACCGCGACCGACGGCCGCGAGATGACCCGGATCATGGGCGATCACCGCATCGACCTCCTGA
TCCTCGATGTGATGCTGCCCGGCGAGGACGGCTTGACCCTGTGCCGCAAGCTGCGCGCTGAATCGCAGGTGCCGATCATC
ATGCTGACAGCGCGCGGCGAGGACGTCGACCGCATTCTCGGGCTCGAGATGGGCGCCGACGACTATCTGCCGAAGCCGTT
CAATCCGCGCGAGCTGCTCGCCCGCATCAATGCGGTGCTGCGCCGCCAGGCCGCGGCGATCACCGCGAGCGCCACCGAGG
GCGCGACCGCGCTGAGCTTCCTCGGCTGGAAGATCGACTTCCGCCTGCGCGAACTGCGCAATCCCGAAGGCGCGCGCGTC
GCCATGACCAGCGCCGAGTTCGACCTGTTGCGCACCTTTTGCGAACGGCCGGGCCGCGTGCTGTCGCGTGACAGCCTGCT
CGACCTGACGCAAGGCCGCAGCGCCGGCTCGTTCGAGCGCTCGATCGACGTTCTGGTGAGCCGCATCCGCCGCAAGATCG
AACCTGATCCGCAGGAGGCGACGATGATCAAGACCGTGCGGTCCGGCGGCTACATGTTCACGCCCGTCGTCGAGGTGGTG
ACCGCGCCGCAGAGCCATTGA

Upstream 100 bases:

>100_bases
GCGCCACTCGGTATCCCAGCCTTGCCGGACGTTGCCGCCAGGAAACATTCCGTAACAAAAAATTTCGCAAAACGCCGCGA
TTCTAGGTCAATTGATCAGC

Downstream 100 bases:

>100_bases
CCGGTCGATCGGGTGGCGCTGGCATGATGTCGTTCGGCTTTCTCAACCTGAAGGGAATCCGCGGCCAGATCACGGCGCTG
GTGGCCATCTCGATCGTGGC

Product: OmpR family two component response transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAQTQPHILVVEDDRETRTLIAKYLRNNACNVTTATDGREMTRIMGDHRIDLLILDVMLPGEDGLTLCRKLRAESQVPII
MLTARGEDVDRILGLEMGADDYLPKPFNPRELLARINAVLRRQAAAITASATEGATALSFLGWKIDFRLRELRNPEGARV
AMTSAEFDLLRTFCERPGRVLSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYMFTPVVEVV
TAPQSH

Sequences:

>Translated_246_residues
MAQTQPHILVVEDDRETRTLIAKYLRNNACNVTTATDGREMTRIMGDHRIDLLILDVMLPGEDGLTLCRKLRAESQVPII
MLTARGEDVDRILGLEMGADDYLPKPFNPRELLARINAVLRRQAAAITASATEGATALSFLGWKIDFRLRELRNPEGARV
AMTSAEFDLLRTFCERPGRVLSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYMFTPVVEVV
TAPQSH
>Mature_245_residues
AQTQPHILVVEDDRETRTLIAKYLRNNACNVTTATDGREMTRIMGDHRIDLLILDVMLPGEDGLTLCRKLRAESQVPIIM
LTARGEDVDRILGLEMGADDYLPKPFNPRELLARINAVLRRQAAAITASATEGATALSFLGWKIDFRLRELRNPEGARVA
MTSAEFDLLRTFCERPGRVLSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYMFTPVVEVVT
APQSH

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=46.5811965811966, Blast_Score=217, Evalue=6e-58,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=40.6113537117904, Blast_Score=184, Evalue=4e-48,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=36.7965367965368, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1786599, Length=237, Percent_Identity=37.9746835443038, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=40.5286343612335, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=37.4468085106383, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=35.0877192982456, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=38.3259911894273, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=33.7719298245614, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI87082012, Length=229, Percent_Identity=33.1877729257642, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1790860, Length=231, Percent_Identity=33.7662337662338, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=33.0396475770925, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=31.1111111111111, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790552, Length=230, Percent_Identity=30.4347826086957, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1790299, Length=110, Percent_Identity=30.9090909090909, Blast_Score=65, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322000, Length=102, Percent_Identity=35.2941176470588, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27504; Mature: 27373

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTQPHILVVEDDRETRTLIAKYLRNNACNVTTATDGREMTRIMGDHRIDLLILDVMLP
CCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCEEEEEEEEEEC
GEDGLTLCRKLRAESQVPIIMLTARGEDVDRILGLEMGADDYLPKPFNPRELLARINAVL
CCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
RRQAAAITASATEGATALSFLGWKIDFRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV
HHHHHHHEECCCCCHHHHHHHCEEEEEHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCC
LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYMFTPVVEVV
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHH
TAPQSH
CCCCCC
>Mature Secondary Structure 
AQTQPHILVVEDDRETRTLIAKYLRNNACNVTTATDGREMTRIMGDHRIDLLILDVMLP
CCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCEEEEEEEEEEC
GEDGLTLCRKLRAESQVPIIMLTARGEDVDRILGLEMGADDYLPKPFNPRELLARINAVL
CCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
RRQAAAITASATEGATALSFLGWKIDFRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV
HHHHHHHEECCCCCHHHHHHHCEEEEEHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCC
LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYMFTPVVEVV
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHH
TAPQSH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]