Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146342540

Identifier: 146342540

GI number: 146342540

Start: 5904360

End: 5905571

Strand: Direct

Name: 146342540

Synonym: BRADO5702

Alternate gene names: NA

Gene position: 5904360-5905571 (Clockwise)

Preceding gene: 146342539

Following gene: 146342541

Centisome position: 79.18

GC content: 64.27

Gene sequence:

>1212_bases
ATGAGGCCCTCGACGCACGCCGTCGCCGCCGCCATCGCGCTTGCAGCGCTTTGCGGAACCGCTCACGCGCAGACGATCTC
CGACGACATGGTCAAGATCGGCGTGCTCACGGACATGTCGAGCCTGTATGCCGACGCCACCGGCAAGGGTTCGCTGGTAG
CGGTGCAGATGGCGGTCGAGGATTACGGCGGCAAGGTCAAGGGCAAGAAGGTCGAGGTGGTCTCCGCCGACCACCAGAAC
AAGCCGGACGTCGGCGTCAACATCGCCCGCAACTGGTACGACAACGAGAAGGTCGACGCGATCTTCGACGTGCCGACCTC
CTCGGTCGCGCTGCCGATCTCGGCGCTGACGCGCGAGAAGAACAAGATCCACATCAATTCCGGCGGCGGCTCCTCCGATA
TCACCGGCACGCAGTGCTCGCCCAACACGGTGCACTGGACCTACGACACCTATGCGCTGTCCAACGTCGCCGGCAAGGCG
ATGGTCAAACGCGGCGAGGACACCTGGTTCTTCATCACCGCCGACTACGCGTTCGGGCAGGCGCTGGAGCGCGACGCCGC
CAACGTGGTGAAGGAAGCCGGCGGCAAGGTGCTCGGCGACGTGCGGCATCCGTTGAACTCGTCGGACTTCTCGTCCTTCG
TGCTCCAGGCGCAGGCCTCCAAGGCGAAGGTCGTGGGCCTCGCAAATGCCGGCGGCGACACCCAGAACGCGCTGAAGCAG
GCCGCCGAGTTCGGCCTGGCCCAGAGCGGCCAGAAGATGATCGCCTTGCTGATGGAGATCACCGACGTGCATTCGCTCGG
CATCAAGTCGACATCAGGCCTGATCGTCACCGACGCGTTCTACTGGGACATGAACGACGAGACCCGCGCCTTCTCCAAGC
GCTTCAACGAGAAGGTCGGGCACATGCCGACCATGATCCAGGCCGGCCTCTACTCCGCGACCATGCATTACCTCAAGGCC
ATCGAGGCGATCGGCACCGACGAAGCGCCGAAGGTCATGGAGCAGATGCGCGCCACCCCCGTGAACGACTTCTTCGCCAA
GAACGGCAAGATCCGCATCGACGGCCGCATGGTCCACGACATGTATCTGTTCGAGGTCAAGAAGCCCGAGGAGTCGAAGG
GCGACTGGGATCTCTACAAGCTGATCGCGACCGTGCCGGGCGACGAGGCGTTCCGCCCGCTCGACAAGGGCGGCTGCCCG
CTGGTGAAATAG

Upstream 100 bases:

>100_bases
CCATCTGCTCAGCTTTGGCTCGGGTTTTTCTTGGCCGGTGCTGCAAGACCGGCTAGAGAGCAAAGGCCAACGAGCAAGAC
ATCAAGAACGGGAGAAAACA

Downstream 100 bases:

>100_bases
GACGGAACGAAACTCATATATTTGTTATTTGTCGCAGCACCGCTGCCCGATACCGTGCCCTCTCCCCTTGCGGGAGAGGG
CAGCGCCGGCCCATCCTCTT

Product: putative ABC branched-chain amino transporter, periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MRPSTHAVAAAIALAALCGTAHAQTISDDMVKIGVLTDMSSLYADATGKGSLVAVQMAVEDYGGKVKGKKVEVVSADHQN
KPDVGVNIARNWYDNEKVDAIFDVPTSSVALPISALTREKNKIHINSGGGSSDITGTQCSPNTVHWTYDTYALSNVAGKA
MVKRGEDTWFFITADYAFGQALERDAANVVKEAGGKVLGDVRHPLNSSDFSSFVLQAQASKAKVVGLANAGGDTQNALKQ
AAEFGLAQSGQKMIALLMEITDVHSLGIKSTSGLIVTDAFYWDMNDETRAFSKRFNEKVGHMPTMIQAGLYSATMHYLKA
IEAIGTDEAPKVMEQMRATPVNDFFAKNGKIRIDGRMVHDMYLFEVKKPEESKGDWDLYKLIATVPGDEAFRPLDKGGCP
LVK

Sequences:

>Translated_403_residues
MRPSTHAVAAAIALAALCGTAHAQTISDDMVKIGVLTDMSSLYADATGKGSLVAVQMAVEDYGGKVKGKKVEVVSADHQN
KPDVGVNIARNWYDNEKVDAIFDVPTSSVALPISALTREKNKIHINSGGGSSDITGTQCSPNTVHWTYDTYALSNVAGKA
MVKRGEDTWFFITADYAFGQALERDAANVVKEAGGKVLGDVRHPLNSSDFSSFVLQAQASKAKVVGLANAGGDTQNALKQ
AAEFGLAQSGQKMIALLMEITDVHSLGIKSTSGLIVTDAFYWDMNDETRAFSKRFNEKVGHMPTMIQAGLYSATMHYLKA
IEAIGTDEAPKVMEQMRATPVNDFFAKNGKIRIDGRMVHDMYLFEVKKPEESKGDWDLYKLIATVPGDEAFRPLDKGGCP
LVK
>Mature_403_residues
MRPSTHAVAAAIALAALCGTAHAQTISDDMVKIGVLTDMSSLYADATGKGSLVAVQMAVEDYGGKVKGKKVEVVSADHQN
KPDVGVNIARNWYDNEKVDAIFDVPTSSVALPISALTREKNKIHINSGGGSSDITGTQCSPNTVHWTYDTYALSNVAGKA
MVKRGEDTWFFITADYAFGQALERDAANVVKEAGGKVLGDVRHPLNSSDFSSFVLQAQASKAKVVGLANAGGDTQNALKQ
AAEFGLAQSGQKMIALLMEITDVHSLGIKSTSGLIVTDAFYWDMNDETRAFSKRFNEKVGHMPTMIQAGLYSATMHYLKA
IEAIGTDEAPKVMEQMRATPVNDFFAKNGKIRIDGRMVHDMYLFEVKKPEESKGDWDLYKLIATVPGDEAFRPLDKGGCP
LVK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 43450; Mature: 43450

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSTHAVAAAIALAALCGTAHAQTISDDMVKIGVLTDMSSLYADATGKGSLVAVQMAVE
CCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCEEEEEEEEH
DYGGKVKGKKVEVVSADHQNKPDVGVNIARNWYDNEKVDAIFDVPTSSVALPISALTREK
HCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCEEEHHHHHCCC
NKIHINSGGGSSDITGTQCSPNTVHWTYDTYALSNVAGKAMVKRGEDTWFFITADYAFGQ
CEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
ALERDAANVVKEAGGKVLGDVRHPLNSSDFSSFVLQAQASKAKVVGLANAGGDTQNALKQ
HHHHHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
AAEFGLAQSGQKMIALLMEITDVHSLGIKSTSGLIVTDAFYWDMNDETRAFSKRFNEKVG
HHHHCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHC
HMPTMIQAGLYSATMHYLKAIEAIGTDEAPKVMEQMRATPVNDFFAKNGKIRIDGRMVHD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCEEEECCEEEEE
MYLFEVKKPEESKGDWDLYKLIATVPGDEAFRPLDKGGCPLVK
EEEEEECCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRPSTHAVAAAIALAALCGTAHAQTISDDMVKIGVLTDMSSLYADATGKGSLVAVQMAVE
CCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCEEEEEEEEH
DYGGKVKGKKVEVVSADHQNKPDVGVNIARNWYDNEKVDAIFDVPTSSVALPISALTREK
HCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCEEEHHHHHCCC
NKIHINSGGGSSDITGTQCSPNTVHWTYDTYALSNVAGKAMVKRGEDTWFFITADYAFGQ
CEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
ALERDAANVVKEAGGKVLGDVRHPLNSSDFSSFVLQAQASKAKVVGLANAGGDTQNALKQ
HHHHHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
AAEFGLAQSGQKMIALLMEITDVHSLGIKSTSGLIVTDAFYWDMNDETRAFSKRFNEKVG
HHHHCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHC
HMPTMIQAGLYSATMHYLKAIEAIGTDEAPKVMEQMRATPVNDFFAKNGKIRIDGRMVHD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCEEEECCEEEEE
MYLFEVKKPEESKGDWDLYKLIATVPGDEAFRPLDKGGCPLVK
EEEEEECCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA