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The map label for this gene is recN [H]

Identifier: 146342489

GI number: 146342489

Start: 5839965

End: 5841638

Strand: Reverse

Name: recN [H]

Synonym: BRADO5650

Alternate gene names: 146342489

Gene position: 5841638-5839965 (Counterclockwise)

Preceding gene: 146342490

Following gene: 146342488

Centisome position: 78.34

GC content: 70.31

Gene sequence:

>1674_bases
ATGCTGGCGCGACTGTCGATCCGTGACATCGTCCTGATCGAACGACTCGATCTCGAATTCTCCGAGGGGCTAGCGGTGCT
GACCGGCGAGACCGGCGCCGGCAAGTCCATCCTGCTCGATGCCTTTGCCCTGGCCCTCGGCGGGCGCGGCGATGCCAGCC
TGGTGCGGCACGGCGCCGATCAGGGGCAGGTCACGGCCGTGTTCGAGATCGGCAAGGATCATCCGGCCGCGCGGATCCTG
GCCGCCAACGGGCTGGATGCCGACGGCGAGATGATCCTGCGCCGGGTCCAGTATGGCGACGGCCGCACCCGCGCCTTCAT
TAACGACCAATCGGTCAGCGTTCAGACCCTCAAGGCGATCGGGGCCACCTTGGTCGAGATTCACGGCCAGCATGACGAGC
GCGCGCTGGTCGATGCCGCCACCCATCGCAGGCTGCTCGATGCCTTTGCCGGGCTCGAGAAGGATGTTGCCGGCGTCGAG
ACGCTATGGGCGGCGCGCCGTAGCGCGGTCTCGGCGCTCGATCAGCATCGCGCCGGGATGGAGCGCGCAGCGCGCGAGGC
CGACTATCTGCGGCATGCCTCGGACGAATTGAAGAAGCTGGCGCCGAAGGAGGGCGAGGAGACGCAGCTCGCGACCCGAC
GCACGGCGATGATGCAGGGCGAGAAGATCGCCGGCGATCTGCGCGACGCTCAGGATGCCGTCAGCGGCAATCAGTCGCCG
ATCGCGGCGTTGGCAGCGGCGGTCCGCCGGCTGGAGCGGCGCGCGGTCAGCTCGCCGGCCCTGGTCGATCCCGCCGTCAA
GGCGATGGACGCCGCGATCAACGCGCTGGAGGAGGCCGATCAGCATCTGACGGCGGCGCTGGCAGCCACCGACTTCGATC
CGCTGGAGCTGGAGCGCATCGAGGAGCGGCTGTTCGCCTTGCGCGCGGCGGCCCGCAAATATTCGACGCCGGTCGATGGC
CTGGCGGCGCTGGCCGCCAAATACGCCGCCGACGTCGTGCTGATCGACGCGGGCGCCGAGCAGCTGAAGAAGCTGGAGGC
GGCGGCAGCAGCGGCGGATGCGCGCTACGCGGCGGCCGCGGCCAAGCTTTCGGCGGCGCGTATCAAGGCGGCTGAGAAGC
TCAACCGGGCCGTCCATGCCGAGCTCGGCCCGCTGAAGCTCGAGCGCGCGAAGTTCATGACCCAGGTCGACAGCGACGCC
GACGTGCCGGGGCCAGAGGGCATCGACCGCGTCGAATTCTGGGTCCAGACCAACCCGGGCACCCGGCCCGGTCCGATGAT
GAAGGTCGCCTCAGGGGGCGAGCTGTCGCGGTTCCTGCTGGCGCTCAAAGTGGTGCTGTCGGATCGCGGCTCAGCGCCGA
CCCTTGTATTCGACGAGATCGATACAGGCGTGGGCGGCGCGGTGGCGGACGCCATCGGCGCCCGCCTGGCGCGGCTCGCC
CACGGCGTCCAGGTCATGGCCGTGACCCATGCGCCGCAAGTCGCGGCCCGGGCGGACCAGCATCTCTTGATCTCCAAGGA
TGCGCTCGACCGCGGCAAGCGCGTCGTCACCCGCGTCAACACGCTCGCCACCCTGCATCGCCGCGAGGAGATCGCCCGCA
TGCTGGCCGGCGCCGAGGTCACCGCCGAAGCCCGCGCCGCCGCCGACCGCCTGCTGGAGGCGGCGGCGGCCTAA

Upstream 100 bases:

>100_bases
GTCCTGCTTTGTTCTCAATTCTTGTTTTGTTCTCATTTTGCTGCTAGCATCGAGTCGTTCGCTCAGGGGTATCCTGCCCC
GTTACGAAGGACCTCGGTTC

Downstream 100 bases:

>100_bases
GTTAGGGGGTGACCCGAACGCTTTTGGCACCGCCGCGCGCATTGTGTAAACCGTCGTCCTTGGGAGGCCTGAAGCCTGCC
CCTGGTTCGACGAGCAGACA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLARLSIRDIVLIERLDLEFSEGLAVLTGETGAGKSILLDAFALALGGRGDASLVRHGADQGQVTAVFEIGKDHPAARIL
AANGLDADGEMILRRVQYGDGRTRAFINDQSVSVQTLKAIGATLVEIHGQHDERALVDAATHRRLLDAFAGLEKDVAGVE
TLWAARRSAVSALDQHRAGMERAAREADYLRHASDELKKLAPKEGEETQLATRRTAMMQGEKIAGDLRDAQDAVSGNQSP
IAALAAAVRRLERRAVSSPALVDPAVKAMDAAINALEEADQHLTAALAATDFDPLELERIEERLFALRAAARKYSTPVDG
LAALAAKYAADVVLIDAGAEQLKKLEAAAAAADARYAAAAAKLSAARIKAAEKLNRAVHAELGPLKLERAKFMTQVDSDA
DVPGPEGIDRVEFWVQTNPGTRPGPMMKVASGGELSRFLLALKVVLSDRGSAPTLVFDEIDTGVGGAVADAIGARLARLA
HGVQVMAVTHAPQVAARADQHLLISKDALDRGKRVVTRVNTLATLHRREEIARMLAGAEVTAEARAAADRLLEAAAA

Sequences:

>Translated_557_residues
MLARLSIRDIVLIERLDLEFSEGLAVLTGETGAGKSILLDAFALALGGRGDASLVRHGADQGQVTAVFEIGKDHPAARIL
AANGLDADGEMILRRVQYGDGRTRAFINDQSVSVQTLKAIGATLVEIHGQHDERALVDAATHRRLLDAFAGLEKDVAGVE
TLWAARRSAVSALDQHRAGMERAAREADYLRHASDELKKLAPKEGEETQLATRRTAMMQGEKIAGDLRDAQDAVSGNQSP
IAALAAAVRRLERRAVSSPALVDPAVKAMDAAINALEEADQHLTAALAATDFDPLELERIEERLFALRAAARKYSTPVDG
LAALAAKYAADVVLIDAGAEQLKKLEAAAAAADARYAAAAAKLSAARIKAAEKLNRAVHAELGPLKLERAKFMTQVDSDA
DVPGPEGIDRVEFWVQTNPGTRPGPMMKVASGGELSRFLLALKVVLSDRGSAPTLVFDEIDTGVGGAVADAIGARLARLA
HGVQVMAVTHAPQVAARADQHLLISKDALDRGKRVVTRVNTLATLHRREEIARMLAGAEVTAEARAAADRLLEAAAA
>Mature_557_residues
MLARLSIRDIVLIERLDLEFSEGLAVLTGETGAGKSILLDAFALALGGRGDASLVRHGADQGQVTAVFEIGKDHPAARIL
AANGLDADGEMILRRVQYGDGRTRAFINDQSVSVQTLKAIGATLVEIHGQHDERALVDAATHRRLLDAFAGLEKDVAGVE
TLWAARRSAVSALDQHRAGMERAAREADYLRHASDELKKLAPKEGEETQLATRRTAMMQGEKIAGDLRDAQDAVSGNQSP
IAALAAAVRRLERRAVSSPALVDPAVKAMDAAINALEEADQHLTAALAATDFDPLELERIEERLFALRAAARKYSTPVDG
LAALAAKYAADVVLIDAGAEQLKKLEAAAAAADARYAAAAAKLSAARIKAAEKLNRAVHAELGPLKLERAKFMTQVDSDA
DVPGPEGIDRVEFWVQTNPGTRPGPMMKVASGGELSRFLLALKVVLSDRGSAPTLVFDEIDTGVGGAVADAIGARLARLA
HGVQVMAVTHAPQVAARADQHLLISKDALDRGKRVVTRVNTLATLHRREEIARMLAGAEVTAEARAAADRLLEAAAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=562, Percent_Identity=33.0960854092527, Blast_Score=275, Evalue=4e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59007; Mature: 59007

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARLSIRDIVLIERLDLEFSEGLAVLTGETGAGKSILLDAFALALGGRGDASLVRHGAD
CCCCCCHHHHHHHHHHCCHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGQVTAVFEIGKDHPAARILAANGLDADGEMILRRVQYGDGRTRAFINDQSVSVQTLKAI
CCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
GATLVEIHGQHDERALVDAATHRRLLDAFAGLEKDVAGVETLWAARRSAVSALDQHRAGM
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERAAREADYLRHASDELKKLAPKEGEETQLATRRTAMMQGEKIAGDLRDAQDAVSGNQSP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH
IAALAAAVRRLERRAVSSPALVDPAVKAMDAAINALEEADQHLTAALAATDFDPLELERI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EERLFALRAAARKYSTPVDGLAALAAKYAADVVLIDAGAEQLKKLEAAAAAADARYAAAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
AKLSAARIKAAEKLNRAVHAELGPLKLERAKFMTQVDSDADVPGPEGIDRVEFWVQTNPG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
TRPGPMMKVASGGELSRFLLALKVVLSDRGSAPTLVFDEIDTGVGGAVADAIGARLARLA
CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
HGVQVMAVTHAPQVAARADQHLLISKDALDRGKRVVTRVNTLATLHRREEIARMLAGAEV
CCCEEEEEECCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TAEARAAADRLLEAAAA
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLARLSIRDIVLIERLDLEFSEGLAVLTGETGAGKSILLDAFALALGGRGDASLVRHGAD
CCCCCCHHHHHHHHHHCCHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGQVTAVFEIGKDHPAARILAANGLDADGEMILRRVQYGDGRTRAFINDQSVSVQTLKAI
CCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
GATLVEIHGQHDERALVDAATHRRLLDAFAGLEKDVAGVETLWAARRSAVSALDQHRAGM
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERAAREADYLRHASDELKKLAPKEGEETQLATRRTAMMQGEKIAGDLRDAQDAVSGNQSP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH
IAALAAAVRRLERRAVSSPALVDPAVKAMDAAINALEEADQHLTAALAATDFDPLELERI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EERLFALRAAARKYSTPVDGLAALAAKYAADVVLIDAGAEQLKKLEAAAAAADARYAAAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
AKLSAARIKAAEKLNRAVHAELGPLKLERAKFMTQVDSDADVPGPEGIDRVEFWVQTNPG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
TRPGPMMKVASGGELSRFLLALKVVLSDRGSAPTLVFDEIDTGVGGAVADAIGARLARLA
CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
HGVQVMAVTHAPQVAARADQHLLISKDALDRGKRVVTRVNTLATLHRREEIARMLAGAEV
CCCEEEEEECCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TAEARAAADRLLEAAAA
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA