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The map label for this gene is yfiO [C]

Identifier: 146342490

GI number: 146342490

Start: 5841760

End: 5842653

Strand: Reverse

Name: yfiO [C]

Synonym: BRADO5651

Alternate gene names: 146342490

Gene position: 5842653-5841760 (Counterclockwise)

Preceding gene: 146342491

Following gene: 146342489

Centisome position: 78.36

GC content: 62.86

Gene sequence:

>894_bases
ATGTCGACACAGCGTCTCCCGCGCGAGCTCAGTCCTCAGGCCATCTCGATCGGCCGCCGCATGCGCTTCGCCGCATCGCT
GGCGCTGCTGGCGTTCCCGCTGGCCGGCTGCGGCACCGGCGGGCTCTGGGACAAGTTCCTTGCCAAGGACGATACGTTCG
TCGATGAGCCCGCGGACAAGCTCTACAATGAGGGCTTGTACATGCTGAACGAAAAGAAGGACATGAAGGGCGCGAACAAG
AAGTTCGAGGAGGTCGATCGCCAGCATCCTTATTCCGACTGGGCGCGCAAATCGCTGCTGATGTCGGCCTACGCCTCCTA
CCAGGCCGGTGATTACGACGGCTGCATCGGTTCGGCGACCCGCTACGTGACGCTGCATCCCGGCAGCCCGGACGCGGCCT
ATGCGCAATACCTCATCGCAGCGTCGCATTACGATCAGATCCCGGACATCAGCCGCGACCAGGGCCGGACGGAAAAGGCG
ATCGCCGCGCTCGAAGAGGTGGTGCGCAAATATCCGAACTCGGAATATGCCACCAACGCCAAGGCGAAGATGGAAGGCGC
GCGCGACCAGCTCGCCGGCAAGGAGATGGATGTCGGCCGCTACTATATGCAGAAGCGCGACTACACCGCCGCAATCAACC
GCTTCAAGACGGTGGTGACTCAGTACCAGACGACCCGTCATGTCGAGGAGGCCTTGTTCCGTCTGACCGAGGCCTACATG
ACGATCGGCATCGTCGGCGAGGCGCAGACGGCCGCCGCCGTGCTCGGCCACAACTTCCCGGACAGCAAGTGGTACAAGGA
CGCCTATAACCTCGTGAAGTCCGGCGGGGTCGAGCCGGAGGAGAACAAGGGCTCCTATATCTCGCGGGCGTTCAAGAAGC
TGGGGCTCGGCTGA

Upstream 100 bases:

>100_bases
GCGTGATGCGTGCCACAACAGGCTCTTCCTTCGCGGTCATGAGACGATGATCATGATGCGCGGCGTAGATCAGATCACAG
GCATCGGGTTCCAAAGCAGC

Downstream 100 bases:

>100_bases
GCTGGCAGGGACTTGAAACTGGTCCTGCTTTGTTCTCAATTCTTGTTTTGTTCTCATTTTGCTGCTAGCATCGAGTCGTT
CGCTCAGGGGTATCCTGCCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSTQRLPRELSPQAISIGRRMRFAASLALLAFPLAGCGTGGLWDKFLAKDDTFVDEPADKLYNEGLYMLNEKKDMKGANK
KFEEVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTEKA
IAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYM
TIGIVGEAQTAAAVLGHNFPDSKWYKDAYNLVKSGGVEPEENKGSYISRAFKKLGLG

Sequences:

>Translated_297_residues
MSTQRLPRELSPQAISIGRRMRFAASLALLAFPLAGCGTGGLWDKFLAKDDTFVDEPADKLYNEGLYMLNEKKDMKGANK
KFEEVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTEKA
IAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYM
TIGIVGEAQTAAAVLGHNFPDSKWYKDAYNLVKSGGVEPEENKGSYISRAFKKLGLG
>Mature_296_residues
STQRLPRELSPQAISIGRRMRFAASLALLAFPLAGCGTGGLWDKFLAKDDTFVDEPADKLYNEGLYMLNEKKDMKGANKK
FEEVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTEKAI
AALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMT
IGIVGEAQTAAAVLGHNFPDSKWYKDAYNLVKSGGVEPEENKGSYISRAFKKLGLG

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=249, Percent_Identity=23.2931726907631, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33217; Mature: 33086

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQRLPRELSPQAISIGRRMRFAASLALLAFPLAGCGTGGLWDKFLAKDDTFVDEPADK
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHH
LYNEGLYMLNEKKDMKGANKKFEEVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSAT
HHHCCEEEECCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
RYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTEKAIAALEEVVRKYPNSEYATNA
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
KAKMEGARDQLAGKEMDVGRYYMQKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIGIVGEAQTAAAVLGHNFPDSKWYKDAYNLVKSGGVEPEENKGSYISRAFKKLGLG
HHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
STQRLPRELSPQAISIGRRMRFAASLALLAFPLAGCGTGGLWDKFLAKDDTFVDEPADK
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHH
LYNEGLYMLNEKKDMKGANKKFEEVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSAT
HHHCCEEEECCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
RYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTEKAIAALEEVVRKYPNSEYATNA
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
KAKMEGARDQLAGKEMDVGRYYMQKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIGIVGEAQTAAAVLGHNFPDSKWYKDAYNLVKSGGVEPEENKGSYISRAFKKLGLG
HHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]