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The map label for this gene is sufD [C]

Identifier: 146342290

GI number: 146342290

Start: 5631465

End: 5632790

Strand: Reverse

Name: sufD [C]

Synonym: BRADO5445

Alternate gene names: 146342290

Gene position: 5632790-5631465 (Counterclockwise)

Preceding gene: 146342291

Following gene: 146342289

Centisome position: 75.54

GC content: 69.08

Gene sequence:

>1326_bases
ATGGGCGTCGCGATCCGCAAGACCAAGGCCGAGCTGGGATTGGCCGATCTGTACCAGGTCGCCCGCCGCTATCTGCCGGG
CGGCGAGGAGATCACGGCGGTGCGCGCCGCTGCGTTCGATCGCTTCACGGCGGTCGGCCTGCCACACCGGCGGGTCGAGG
CGTGGCGCTACACCGATCTGCGGACGCAGATGAAGGAAGCCAAGCGGCTCGCCTCGCTGCCGGACGACGCGGCCAAGGCC
AGGGCCAGAGAGGCAAAGGACCTGTTCGTCGGCGCCGGCTTCCGCAAGCTCGTCATCGTCGATGGCGCATTCGTACCTGA
GCTCTCCGACCTCGCCGAGCTCGAGACCGGCCTCACCATTCAGCCGATGGCGGATGCGCTCGCCGCCGACAAGCCGCTGC
TGTCGCAGCGCCTCGGCGCGATCGTACCGGATGACGATCCGGCGCTGGCGCTCAACACCGCGCTCGCCGCCAATGGCGTC
GTGATCCTTGTCGCGCCGGGCACCGCGCTGAGCCGGCCGATCCATGTCGCCTTCGTCACGACCAACTGGGTCGCGACCTC
GATGTTCACCCGCTCGCTGGTCAATATCGGTGCGGGCGCGAGCGCCACCATCGTCGAGTCGCATCAGGGGCCCGACGGCA
GCGAGTATCAGGTCAACACCGCGATGCAGCTCGTCGTCGGCGACGAGGCGCGGATCGACCACATCAAGGTCGTCAGCGAG
GGCGGCAGCGCGCTGCATATCGGCTCGCTGCTCGCCAATATCGGCGCGCGCGCGACCTTCAATCAGCTCGGCTTCGTTGC
CGGCGGCAGCCTGGTCCGCAACCAGCTGTTCGTCCGCCTGGCGGGCGAGGGTACCGTCGCCGACATCCGCGGCGGTTCGC
TGCTGTCAGGGACGCAGCACGCCGACACGACGCTGTCGATCGAGCATGCCGCCGAGAACGGCCAGAGCCGCGAGACCTTC
AAGGCGGTGGTCGGCGACACCGCCCGCGCCGTGTTCCAGGGCAAGATCACGGTCGCCCCGGGTGCGCAGAAGACCGACGC
CAAGATGATGTCGCGGGCGCTGCTGCTGTCCGACGAGGCCGAGGCCGATAGCAAGCCGGAGCTCGAGATCTTCGCCGACG
ACGTGCAGTGCGGCCACGGCACCACGACCGGCGCGATCGACGACGAGCTGCTGTTCTATCTGATGGCCCGTGGCATTCCG
CCGGCGGAGGCCAAGGCGCTGCTGATCCAGGCCTTCATCGGCGAGATCATCGAGGGCGCGGCCAACGAAGCCGTGCGTGA
CGCGCTGACCGGGGCGCTGCTGGGCTGGCTCGGACGACGGGAGTAG

Upstream 100 bases:

>100_bases
TATCGTCCGGACGGGGGCTGCGGATCTCGCGCGCGAGCTCGAGGCGACCGGCTACGCGCAGTACCAGAGCGAAGCGGCGT
AAGGGGCGGGGAGCACGAGC

Downstream 100 bases:

>100_bases
ATGATGCATGCAGCGGTGAACGGGAGCGGCTACGACGTCAGCCGCATCCGGGCGGATTTTCCCATTCTCGGCATGCAGGT
CCACGGCAAGCCGCTGGTCT

Product: sufD, needed for fhuF Fe-S center production/stability

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MGVAIRKTKAELGLADLYQVARRYLPGGEEITAVRAAAFDRFTAVGLPHRRVEAWRYTDLRTQMKEAKRLASLPDDAAKA
RAREAKDLFVGAGFRKLVIVDGAFVPELSDLAELETGLTIQPMADALAADKPLLSQRLGAIVPDDDPALALNTALAANGV
VILVAPGTALSRPIHVAFVTTNWVATSMFTRSLVNIGAGASATIVESHQGPDGSEYQVNTAMQLVVGDEARIDHIKVVSE
GGSALHIGSLLANIGARATFNQLGFVAGGSLVRNQLFVRLAGEGTVADIRGGSLLSGTQHADTTLSIEHAAENGQSRETF
KAVVGDTARAVFQGKITVAPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDDELLFYLMARGIP
PAEAKALLIQAFIGEIIEGAANEAVRDALTGALLGWLGRRE

Sequences:

>Translated_441_residues
MGVAIRKTKAELGLADLYQVARRYLPGGEEITAVRAAAFDRFTAVGLPHRRVEAWRYTDLRTQMKEAKRLASLPDDAAKA
RAREAKDLFVGAGFRKLVIVDGAFVPELSDLAELETGLTIQPMADALAADKPLLSQRLGAIVPDDDPALALNTALAANGV
VILVAPGTALSRPIHVAFVTTNWVATSMFTRSLVNIGAGASATIVESHQGPDGSEYQVNTAMQLVVGDEARIDHIKVVSE
GGSALHIGSLLANIGARATFNQLGFVAGGSLVRNQLFVRLAGEGTVADIRGGSLLSGTQHADTTLSIEHAAENGQSRETF
KAVVGDTARAVFQGKITVAPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDDELLFYLMARGIP
PAEAKALLIQAFIGEIIEGAANEAVRDALTGALLGWLGRRE
>Mature_440_residues
GVAIRKTKAELGLADLYQVARRYLPGGEEITAVRAAAFDRFTAVGLPHRRVEAWRYTDLRTQMKEAKRLASLPDDAAKAR
AREAKDLFVGAGFRKLVIVDGAFVPELSDLAELETGLTIQPMADALAADKPLLSQRLGAIVPDDDPALALNTALAANGVV
ILVAPGTALSRPIHVAFVTTNWVATSMFTRSLVNIGAGASATIVESHQGPDGSEYQVNTAMQLVVGDEARIDHIKVVSEG
GSALHIGSLLANIGARATFNQLGFVAGGSLVRNQLFVRLAGEGTVADIRGGSLLSGTQHADTTLSIEHAAENGQSRETFK
AVVGDTARAVFQGKITVAPGAQKTDAKMMSRALLLSDEAEADSKPELEIFADDVQCGHGTTTGAIDDELLFYLMARGIPP
AEAKALLIQAFIGEIIEGAANEAVRDALTGALLGWLGRRE

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=400, Percent_Identity=31.5, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI87081955, Length=344, Percent_Identity=22.3837209302326, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46510; Mature: 46378

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVAIRKTKAELGLADLYQVARRYLPGGEEITAVRAAAFDRFTAVGLPHRRVEAWRYTDL
CCCEEECHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RTQMKEAKRLASLPDDAAKARAREAKDLFVGAGFRKLVIVDGAFVPELSDLAELETGLTI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHCCCEE
QPMADALAADKPLLSQRLGAIVPDDDPALALNTALAANGVVILVAPGTALSRPIHVAFVT
CHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEHHHHCCCEEEEEECCCHHCCCEEEEEEE
TNWVATSMFTRSLVNIGAGASATIVESHQGPDGSEYQVNTAMQLVVGDEARIDHIKVVSE
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEC
GGSALHIGSLLANIGARATFNQLGFVAGGSLVRNQLFVRLAGEGTVADIRGGSLLSGTQH
CCCEEEHHHHHHHHCCCCHHHHHHHHHCCHHHHCEEEEEECCCCCEEECCCCCEECCCCC
ADTTLSIEHAAENGQSRETFKAVVGDTARAVFQGKITVAPGAQKTDAKMMSRALLLSDEA
CCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHEECEEEECCCCCHHHHHHHHHHHHHCCCC
EADSKPELEIFADDVQCGHGTTTGAIDDELLFYLMARGIPPAEAKALLIQAFIGEIIEGA
CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ANEAVRDALTGALLGWLGRRE
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GVAIRKTKAELGLADLYQVARRYLPGGEEITAVRAAAFDRFTAVGLPHRRVEAWRYTDL
CCEEECHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RTQMKEAKRLASLPDDAAKARAREAKDLFVGAGFRKLVIVDGAFVPELSDLAELETGLTI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHCCCEE
QPMADALAADKPLLSQRLGAIVPDDDPALALNTALAANGVVILVAPGTALSRPIHVAFVT
CHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEHHHHCCCEEEEEECCCHHCCCEEEEEEE
TNWVATSMFTRSLVNIGAGASATIVESHQGPDGSEYQVNTAMQLVVGDEARIDHIKVVSE
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEC
GGSALHIGSLLANIGARATFNQLGFVAGGSLVRNQLFVRLAGEGTVADIRGGSLLSGTQH
CCCEEEHHHHHHHHCCCCHHHHHHHHHCCHHHHCEEEEEECCCCCEEECCCCCEECCCCC
ADTTLSIEHAAENGQSRETFKAVVGDTARAVFQGKITVAPGAQKTDAKMMSRALLLSDEA
CCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHEECEEEECCCCCHHHHHHHHHHHHHCCCC
EADSKPELEIFADDVQCGHGTTTGAIDDELLFYLMARGIPPAEAKALLIQAFIGEIIEGA
CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ANEAVRDALTGALLGWLGRRE
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]