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The map label for this gene is yiaO [C]

Identifier: 146341658

GI number: 146341658

Start: 4956059

End: 4957081

Strand: Reverse

Name: yiaO [C]

Synonym: BRADO4762

Alternate gene names: 146341658

Gene position: 4957081-4956059 (Counterclockwise)

Preceding gene: 146341659

Following gene: 146341657

Centisome position: 66.48

GC content: 65.3

Gene sequence:

>1023_bases
ATGGGAATGCGCAAGGGAACGACGCGTCGGCGATTCATGGCGGGAGCGATGGTGGGAGCCGCGGTGCTGCCTTTCACCTC
GCGCTTCGCGAAGGCGGCCGAATTCACGATGAAGCTCGCGACCGGACAGGATCCGTCGCATCCGGTCAACAAGCGGGCGC
GAGAGGCGGCCGATCGCATCAAGGAGGCGAGCGGCGGCCGGCTGGAGATCAACATCTACCCGGCCAACCAGCTCGGCTCC
GACACCGATCTGATCTCGCAGGTCCGCGTCGGCGCGGTCGATGCGATCAATATCTCGAGCTCGGTGCTGGCCACCCGCGT
GCCGCTCGCCGGCATCGTCAACACCGGCTTCGCCTTCACGTCCTATGACCAGGTCTGGAAGGCGATGGACGGCAGCCTCG
GCGATCACATCCGCAAGGATATCGAGAAGACCGGCGCCATCGCGCTCTCCAAGCCGTGGGACAATGGTTTCCGCCAGGTC
ACCTCGTCGACCCGCGAAATCAAGACCCCGGACGATCTCAAGAGCTTCAAGATCCGCGTGCCGGCCGCGCCGATCCTGAC
CAGCCTGTTCCAGGCGCTCGGCGCCGGCCCGACCCCGATCAATTTCAACGAGGTCTACACCTCGCTGCAGACCAAGGTGG
TCGAGGGCCAGGAGAACCCGCTGCCGATCATCGCCACCGCCAAGCTCTACGAAGTGCAGAAATACTGCTCGCTGACCAGC
CACGTCTGGGACGCCTACTGGATCCTCGGCAACCGCGCCGCCCTCGGCAAGCTGCCGTCCGACCTGCAGGTGCTGGTCAC
GCAGGAGTTCGGCAAGTCGGCGGATGACGAGCGGGCCGACATCGCCGCGCTCAGCCAGAGCCTGCGCGCCGACCTCGCCG
CCAAGGGCTTCACCTTCGTCGATGTCGACAAGGAGGCGTTCCGGACCGCACTCGGCAAGACCAGCTTCTACAAGGACTGG
CGCGGCAAGTTCGGCGAGGATGCCTGGAAGATCCTGCAGTCGAACGTGGGAGAGCTCGGATGA

Upstream 100 bases:

>100_bases
TGAAGCAGGTGAAGGGCTGGCTCAAATAGCGGACCAGCCGCGGACATCGACACGCCGGCGCGTGGACGCGCCGGCCATAA
CAACAATTCAGACTGGAGGG

Downstream 100 bases:

>100_bases
ACACGGTCGACGCGTCTCTGGTTGCCCCCACGAAGCACGGCATCGTCGAAACCCTCGAACGGGTGCTGACGAAGCTGATC
GAGATTCCCGCGATCGTCGC

Product: putative TRAP-type C4-dicarboxylate transport system binding periplasmic protein DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MGMRKGTTRRRFMAGAMVGAAVLPFTSRFAKAAEFTMKLATGQDPSHPVNKRAREAADRIKEASGGRLEINIYPANQLGS
DTDLISQVRVGAVDAINISSSVLATRVPLAGIVNTGFAFTSYDQVWKAMDGSLGDHIRKDIEKTGAIALSKPWDNGFRQV
TSSTREIKTPDDLKSFKIRVPAAPILTSLFQALGAGPTPINFNEVYTSLQTKVVEGQENPLPIIATAKLYEVQKYCSLTS
HVWDAYWILGNRAALGKLPSDLQVLVTQEFGKSADDERADIAALSQSLRADLAAKGFTFVDVDKEAFRTALGKTSFYKDW
RGKFGEDAWKILQSNVGELG

Sequences:

>Translated_340_residues
MGMRKGTTRRRFMAGAMVGAAVLPFTSRFAKAAEFTMKLATGQDPSHPVNKRAREAADRIKEASGGRLEINIYPANQLGS
DTDLISQVRVGAVDAINISSSVLATRVPLAGIVNTGFAFTSYDQVWKAMDGSLGDHIRKDIEKTGAIALSKPWDNGFRQV
TSSTREIKTPDDLKSFKIRVPAAPILTSLFQALGAGPTPINFNEVYTSLQTKVVEGQENPLPIIATAKLYEVQKYCSLTS
HVWDAYWILGNRAALGKLPSDLQVLVTQEFGKSADDERADIAALSQSLRADLAAKGFTFVDVDKEAFRTALGKTSFYKDW
RGKFGEDAWKILQSNVGELG
>Mature_339_residues
GMRKGTTRRRFMAGAMVGAAVLPFTSRFAKAAEFTMKLATGQDPSHPVNKRAREAADRIKEASGGRLEINIYPANQLGSD
TDLISQVRVGAVDAINISSSVLATRVPLAGIVNTGFAFTSYDQVWKAMDGSLGDHIRKDIEKTGAIALSKPWDNGFRQVT
SSTREIKTPDDLKSFKIRVPAAPILTSLFQALGAGPTPINFNEVYTSLQTKVVEGQENPLPIIATAKLYEVQKYCSLTSH
VWDAYWILGNRAALGKLPSDLQVLVTQEFGKSADDERADIAALSQSLRADLAAKGFTFVDVDKEAFRTALGKTSFYKDWR
GKFGEDAWKILQSNVGELG

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=315, Percent_Identity=30.1587301587302, Blast_Score=158, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387
- InterPro:   IPR018389
- InterPro:   IPR006311
- InterPro:   IPR004682 [H]

Pfam domain/function: PF04290 DctQ; PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37054; Mature: 36922

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMRKGTTRRRFMAGAMVGAAVLPFTSRFAKAAEFTMKLATGQDPSHPVNKRAREAADRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHH
KEASGGRLEINIYPANQLGSDTDLISQVRVGAVDAINISSSVLATRVPLAGIVNTGFAFT
HHCCCCEEEEEEEECHHCCCHHHHHHHHHHCCEEEECCCHHHHHHHCCHHHHHHCCCEEC
SYDQVWKAMDGSLGDHIRKDIEKTGAIALSKPWDNGFRQVTSSTREIKTPDDLKSFKIRV
CHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCHHCCCCCCCHHHEEEEC
PAAPILTSLFQALGAGPTPINFNEVYTSLQTKVVEGQENPLPIIATAKLYEVQKYCSLTS
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH
HVWDAYWILGNRAALGKLPSDLQVLVTQEFGKSADDERADIAALSQSLRADLAAKGFTFV
HHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
DVDKEAFRTALGKTSFYKDWRGKFGEDAWKILQSNVGELG
ECCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GMRKGTTRRRFMAGAMVGAAVLPFTSRFAKAAEFTMKLATGQDPSHPVNKRAREAADRI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHH
KEASGGRLEINIYPANQLGSDTDLISQVRVGAVDAINISSSVLATRVPLAGIVNTGFAFT
HHCCCCEEEEEEEECHHCCCHHHHHHHHHHCCEEEECCCHHHHHHHCCHHHHHHCCCEEC
SYDQVWKAMDGSLGDHIRKDIEKTGAIALSKPWDNGFRQVTSSTREIKTPDDLKSFKIRV
CHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCHHCCCCCCCHHHEEEEC
PAAPILTSLFQALGAGPTPINFNEVYTSLQTKVVEGQENPLPIIATAKLYEVQKYCSLTS
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH
HVWDAYWILGNRAALGKLPSDLQVLVTQEFGKSADDERADIAALSQSLRADLAAKGFTFV
HHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
DVDKEAFRTALGKTSFYKDWRGKFGEDAWKILQSNVGELG
ECCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]