| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yeeE [C]
Identifier: 146340157
GI number: 146340157
Start: 3378369
End: 3379427
Strand: Reverse
Name: yeeE [C]
Synonym: BRADO3172
Alternate gene names: 146340157
Gene position: 3379427-3378369 (Counterclockwise)
Preceding gene: 146340158
Following gene: 146340148
Centisome position: 45.32
GC content: 68.18
Gene sequence:
>1059_bases ATGTGCGGGCTGCTCGCAGGCGCCGTGCTCGGGGTGGCCGGCCGCGCCGGGCGCTTCTGCACGCTCGCGATGCTCGAGGA CGCGTTCTTCGGCGCCGATACACGGCGGCTCAAATCCTTCGCCCTGGCCGCCGCCGTCGCGCTTGTCGCGACCCAGTTGC TCGCCAGCTTCGGCCTGGTCGATCTCTCCCGCTCGATCTATCTCACCTCCTCCATTCCGCTCGGCGGCGCCATCCTCGGC GGCCTGCTGTTCGGGATCGGCATGGCGCTGGTCGGCACCTGCGGCTTCGGGACCCTGGTGCGCATCGGTGGCGGCGATCT GCGCGCCATCGTCGTCTTTCTCGTGCTCGGCGTCTCCGCATTGGCGGCGATGCGTGGCCTCACTGGATTCTTGCGCGTCG GTTTGATCGAGCCGCTGTCGGTGCATCTGCCGGAGGCAATGAACCAGGGCATGGATACGCTGCTATCCGCAGCTATCGGC TCCTATGCACGGCCCGTCATCGTCTCACTCGCGGCCGTGGCGCTCGCGGCCTGGGCCCTGGCTAATGGCCAATTGTTGAG ATCACCTCGCCTGCTGTTGTCAGGCCTCGCGGTGGGCGGCGCCGTCGCCTTCGGCTGGTTCGCAACCGGCTGGCTCGGCC ATGACGATTTCGACCCCGAGCGGGTGGCCTCGCTCACCTTCGTTGCTCCGCTCGGCAACACCGTGCTCTACATCGCTACG CTCTCGGGCAGCCACGCCGACTTCGCGATCGGCTCGGTCGCCGGCGTCATCCTTGGCTCGTTCCTGGCGGCGATGTTCTC GCGCGTCTTCCGCTGGGAAGCCTGCGACGACGCGCGCGAGCTGAAGCGCCACATGGTCGGCGCGCTCCTGATGGGCACCG GCGGCATCATGTCGATGGGCTGCACCATCGGCCAGGGCCTGTCGGCATTCTCGACGCTCGCGCTATCGGCGCCGCTGACC ATGCTCGCGGTCGCCTGCGGTGCGCGCCTTGGGCTCGAATACACCATGACGGGCGAATGGCGCCCCGCCGTACGCAACCT GTTCCGGATGAGCCATTGA
Upstream 100 bases:
>100_bases TCGCAAGAGGTCTGGCTTCGCCGTCGATCCTGGCGCACAATCGCCCGGACAAGAACAAGGACATCGGGGAGGCATGCTCA GTCCGTCAGCTTTGACGTTC
Downstream 100 bases:
>100_bases CGTCCGGGCGCCGGCCGGCCGCTCCTGCGGATCACGGCATGACATCGTCATGCGCCCCTTCTCCACGGTTTTGACACCAG GCATGGCTTAGCGATCTCGC
Product: YeeE/YedE family membrane protein
Products: NA
Alternate protein names: YeeE/YedE; YeeE/YedE Domain Protein; Transmembrane Protein; YeeE/YedE Family Membrane Protein; SoxT Protein YeeE/YedE Family Protein; YeeE/YedE Domain-Containing Protein; Transporter Component
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MCGLLAGAVLGVAGRAGRFCTLAMLEDAFFGADTRRLKSFALAAAVALVATQLLASFGLVDLSRSIYLTSSIPLGGAILG GLLFGIGMALVGTCGFGTLVRIGGGDLRAIVVFLVLGVSALAAMRGLTGFLRVGLIEPLSVHLPEAMNQGMDTLLSAAIG SYARPVIVSLAAVALAAWALANGQLLRSPRLLLSGLAVGGAVAFGWFATGWLGHDDFDPERVASLTFVAPLGNTVLYIAT LSGSHADFAIGSVAGVILGSFLAAMFSRVFRWEACDDARELKRHMVGALLMGTGGIMSMGCTIGQGLSAFSTLALSAPLT MLAVACGARLGLEYTMTGEWRPAVRNLFRMSH
Sequences:
>Translated_352_residues MCGLLAGAVLGVAGRAGRFCTLAMLEDAFFGADTRRLKSFALAAAVALVATQLLASFGLVDLSRSIYLTSSIPLGGAILG GLLFGIGMALVGTCGFGTLVRIGGGDLRAIVVFLVLGVSALAAMRGLTGFLRVGLIEPLSVHLPEAMNQGMDTLLSAAIG SYARPVIVSLAAVALAAWALANGQLLRSPRLLLSGLAVGGAVAFGWFATGWLGHDDFDPERVASLTFVAPLGNTVLYIAT LSGSHADFAIGSVAGVILGSFLAAMFSRVFRWEACDDARELKRHMVGALLMGTGGIMSMGCTIGQGLSAFSTLALSAPLT MLAVACGARLGLEYTMTGEWRPAVRNLFRMSH >Mature_352_residues MCGLLAGAVLGVAGRAGRFCTLAMLEDAFFGADTRRLKSFALAAAVALVATQLLASFGLVDLSRSIYLTSSIPLGGAILG GLLFGIGMALVGTCGFGTLVRIGGGDLRAIVVFLVLGVSALAAMRGLTGFLRVGLIEPLSVHLPEAMNQGMDTLLSAAIG SYARPVIVSLAAVALAAWALANGQLLRSPRLLLSGLAVGGAVAFGWFATGWLGHDDFDPERVASLTFVAPLGNTVLYIAT LSGSHADFAIGSVAGVILGSFLAAMFSRVFRWEACDDARELKRHMVGALLMGTGGIMSMGCTIGQGLSAFSTLALSAPLT MLAVACGARLGLEYTMTGEWRPAVRNLFRMSH
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788323, Length=332, Percent_Identity=25.3012048192771, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36287; Mature: 36287
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGLLAGAVLGVAGRAGRFCTLAMLEDAFFGADTRRLKSFALAAAVALVATQLLASFGLV CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH DLSRSIYLTSSIPLGGAILGGLLFGIGMALVGTCGFGTLVRIGGGDLRAIVVFLVLGVSA HHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH LAAMRGLTGFLRVGLIEPLSVHLPEAMNQGMDTLLSAAIGSYARPVIVSLAAVALAAWAL HHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANGQLLRSPRLLLSGLAVGGAVAFGWFATGWLGHDDFDPERVASLTFVAPLGNTVLYIAT CCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCEEEEEEE LSGSHADFAIGSVAGVILGSFLAAMFSRVFRWEACDDARELKRHMVGALLMGTGGIMSMG ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHC CTIGQGLSAFSTLALSAPLTMLAVACGARLGLEYTMTGEWRPAVRNLFRMSH CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MCGLLAGAVLGVAGRAGRFCTLAMLEDAFFGADTRRLKSFALAAAVALVATQLLASFGLV CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH DLSRSIYLTSSIPLGGAILGGLLFGIGMALVGTCGFGTLVRIGGGDLRAIVVFLVLGVSA HHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH LAAMRGLTGFLRVGLIEPLSVHLPEAMNQGMDTLLSAAIGSYARPVIVSLAAVALAAWAL HHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANGQLLRSPRLLLSGLAVGGAVAFGWFATGWLGHDDFDPERVASLTFVAPLGNTVLYIAT CCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCEEEEEEE LSGSHADFAIGSVAGVILGSFLAAMFSRVFRWEACDDARELKRHMVGALLMGTGGIMSMG ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHC CTIGQGLSAFSTLALSAPLTMLAVACGARLGLEYTMTGEWRPAVRNLFRMSH CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA