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The map label for this gene is yliB [C]

Identifier: 146339920

GI number: 146339920

Start: 3127890

End: 3129503

Strand: Direct

Name: yliB [C]

Synonym: BRADO2924

Alternate gene names: 146339920

Gene position: 3127890-3129503 (Clockwise)

Preceding gene: 146339919

Following gene: 146339921

Centisome position: 41.95

GC content: 64.68

Gene sequence:

>1614_bases
ATGTCACCTCAATTGCGCCGGGCTCGCTCCGCGCTCGCGTCATGGCTCGTTGCGTCCGCTGTCCTGTTGTCGCCAGGTCT
CGCGCCAGACGTATTTGCTGCCGGCAAGAAGACGATCACCGCAGTGATGCACTCCGACCTGCGTGTCATCGACCCCGGTT
TCACCACCGCCTACATCACCCGTGATCACGGCTACATGGTTTATGACACGCTGGTCGCCACCGATTCGAGCTTCAAGGTC
CAGCCGCAGATGGCGGACTGGAAGGTGTCGGACGACAAGCTGACCTACACGTTCACGCTGCGCGACGGCCTGAAGTGGCA
CGATGGCACGCCCGTCACCGCCGAGGATTGCGTTGCCTCGCTGAAGCGCTGGGGCCGGAACGACGGCATGGGCCAGAAGC
TGATGGACTTCACGGCGAGCCTGGAGTCGCCGGACGCCAAGACCATCGTGCTCAAGCTGAAGGAACCTTACGGCCTGGTT
CTCGAGTCCATCGGCAAGCCGTCGTCCTACGTGCCGTTCATGATGCCGAAGCGCCTCGCCGAGACGCCGCAAGGCCAGCA
GATTCCCGAGCAGATCGGCTCCGGCCCGTTCAAATTCGTCAAGGCGGAATTCCAGCCGGGCGTGAAAGCGGTCTACGAGA
AGAACACCGACTACGTGCCGCGCAAGGAGCCGGCGAGCTGGACGGCGGGCGGCAAGGTGGTGAAGGTAGATCGCGTCGAG
TGGATCACGATGCCCGACGCGCAGACCGCGGTGAACGCGGTGCAGTCCGGCGACATCGACTTCATGGAGGCGCCGCCCTA
TGAGCTGCTGCCGGTCTTGGAGGCGAACTCCGAGCTCACGCTCGACGTGCTGAACAAGTTCGGCTTTCAGACGCTCGGCC
GGATGAACTTCCTGAACCCGCCCTTCGACAACGTGAAGGTTCGCCGCGCGGCGTTCCTGGCGCTGAACCAGAAGGACGTG
CTCGACGCGCTGGTCGGCAATGCCAAGTATCAGAAGATCTGCGGCGCGGTGTTCGTGTGCGGCACGCCGCTGGAGACCGA
TGTCGGCGCCGAGACGCTGATCAAGGGCAACGGCATGGCGGAAGCCAAGAAGCTGCTCGCCGAGTCCGGCTATGACGGCA
CGCCGATCGCAATCATGGCGCCCGGCGATGTGGTCACGCTCAAGGCGCAGCCGATCGTCGCGGCGCAGCTGCTGCGCGAG
GCCGGCTTCAAGGTCGACCTGCAGGCGACGGACTGGCAGACCGTGGTGACACGGCGCGCCAGCCAGAAGCCCGTGAAGGA
GGGCGGCTGGAACATGTTCTTCACCAACTGGGTCGGCGCCGACGTGGCCAATCCCGTGGCGAACGTGTCGGTCGGCGGCC
GCGGCACCAAGGGCGGCTGGTTCGGCTGGGCCGAGGATGCCGACATCGAGAAGCTGCGCGACGCCTTTGCGCGCGCCTCA
TCGCCCGAGGAGCAGAAAAAGATCGCGACCGAGATCCAGAAGCTGAACTACGAGCGGGTGATCTACATTCCGCTCGGTCA
GTATCTGGGGCCGAGCGTGTGGCGCAAGTCGCTGAGCGGCGTCCTCGACGGCCCGGCCACGCCGGTGTTCTGGAACATCG
AGAAGAAGGACTAA

Upstream 100 bases:

>100_bases
GCCGACACCCTCAAGAGCGAAAGAGCGACGTCCAGCGGTCGCCCCGTGTCTCGGTCAGTCCCGAGGCCGTCGTTCACCCC
GTCACGTCAAGAGAGATCGC

Downstream 100 bases:

>100_bases
TCATCGCTGCCGCAGGGTGGGCAAAGCGGTCGCGACGCGGCGGCGTGCCCATCGTCAGGCAGCGTGCTCCTCGGTACGGT
TGGCACGGCGCCATCTCCGC

Product: putative ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MSPQLRRARSALASWLVASAVLLSPGLAPDVFAAGKKTITAVMHSDLRVIDPGFTTAYITRDHGYMVYDTLVATDSSFKV
QPQMADWKVSDDKLTYTFTLRDGLKWHDGTPVTAEDCVASLKRWGRNDGMGQKLMDFTASLESPDAKTIVLKLKEPYGLV
LESIGKPSSYVPFMMPKRLAETPQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNTDYVPRKEPASWTAGGKVVKVDRVE
WITMPDAQTAVNAVQSGDIDFMEAPPYELLPVLEANSELTLDVLNKFGFQTLGRMNFLNPPFDNVKVRRAAFLALNQKDV
LDALVGNAKYQKICGAVFVCGTPLETDVGAETLIKGNGMAEAKKLLAESGYDGTPIAIMAPGDVVTLKAQPIVAAQLLRE
AGFKVDLQATDWQTVVTRRASQKPVKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDADIEKLRDAFARAS
SPEEQKKIATEIQKLNYERVIYIPLGQYLGPSVWRKSLSGVLDGPATPVFWNIEKKD

Sequences:

>Translated_537_residues
MSPQLRRARSALASWLVASAVLLSPGLAPDVFAAGKKTITAVMHSDLRVIDPGFTTAYITRDHGYMVYDTLVATDSSFKV
QPQMADWKVSDDKLTYTFTLRDGLKWHDGTPVTAEDCVASLKRWGRNDGMGQKLMDFTASLESPDAKTIVLKLKEPYGLV
LESIGKPSSYVPFMMPKRLAETPQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNTDYVPRKEPASWTAGGKVVKVDRVE
WITMPDAQTAVNAVQSGDIDFMEAPPYELLPVLEANSELTLDVLNKFGFQTLGRMNFLNPPFDNVKVRRAAFLALNQKDV
LDALVGNAKYQKICGAVFVCGTPLETDVGAETLIKGNGMAEAKKLLAESGYDGTPIAIMAPGDVVTLKAQPIVAAQLLRE
AGFKVDLQATDWQTVVTRRASQKPVKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDADIEKLRDAFARAS
SPEEQKKIATEIQKLNYERVIYIPLGQYLGPSVWRKSLSGVLDGPATPVFWNIEKKD
>Mature_536_residues
SPQLRRARSALASWLVASAVLLSPGLAPDVFAAGKKTITAVMHSDLRVIDPGFTTAYITRDHGYMVYDTLVATDSSFKVQ
PQMADWKVSDDKLTYTFTLRDGLKWHDGTPVTAEDCVASLKRWGRNDGMGQKLMDFTASLESPDAKTIVLKLKEPYGLVL
ESIGKPSSYVPFMMPKRLAETPQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNTDYVPRKEPASWTAGGKVVKVDRVEW
ITMPDAQTAVNAVQSGDIDFMEAPPYELLPVLEANSELTLDVLNKFGFQTLGRMNFLNPPFDNVKVRRAAFLALNQKDVL
DALVGNAKYQKICGAVFVCGTPLETDVGAETLIKGNGMAEAKKLLAESGYDGTPIAIMAPGDVVTLKAQPIVAAQLLREA
GFKVDLQATDWQTVVTRRASQKPVKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDADIEKLRDAFARASS
PEEQKKIATEIQKLNYERVIYIPLGQYLGPSVWRKSLSGVLDGPATPVFWNIEKKD

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=437, Percent_Identity=26.0869565217391, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1787495, Length=475, Percent_Identity=27.7894736842105, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787762, Length=561, Percent_Identity=24.0641711229947, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1789887, Length=474, Percent_Identity=21.5189873417722, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58849; Mature: 58718

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQLRRARSALASWLVASAVLLSPGLAPDVFAAGKKTITAVMHSDLRVIDPGFTTAYIT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCEEECCCCEEEEEE
RDHGYMVYDTLVATDSSFKVQPQMADWKVSDDKLTYTFTLRDGLKWHDGTPVTAEDCVAS
CCCCEEEEEEEEECCCCCEECCCCCCCEECCCEEEEEEEECCCCEECCCCCCCHHHHHHH
LKRWGRNDGMGQKLMDFTASLESPDAKTIVLKLKEPYGLVLESIGKPSSYVPFMMPKRLA
HHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHH
ETPQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNTDYVPRKEPASWTAGGKVVKVDRVE
CCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECEE
WITMPDAQTAVNAVQSGDIDFMEAPPYELLPVLEANSELTLDVLNKFGFQTLGRMNFLNP
EEECCCHHHHHHHHHCCCCCEECCCCHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
PFDNVKVRRAAFLALNQKDVLDALVGNAKYQKICGAVFVCGTPLETDVGAETLIKGNGMA
CCCCCEEHHHHEEECCHHHHHHHHHCCCHHHHHHCEEEECCCCCCCCCCCHHEEECCCHH
EAKKLLAESGYDGTPIAIMAPGDVVTLKAQPIVAAQLLREAGFKVDLQATDWQTVVTRRA
HHHHHHHHCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHCCCEEEEECCCHHHHHHHHH
SQKPVKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDADIEKLRDAFARAS
CCCCHHHCCCCEEEECCCCCHHCCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCC
SPEEQKKIATEIQKLNYERVIYIPLGQYLGPSVWRKSLSGVLDGPATPVFWNIEKKD
CCHHHHHHHHHHHHCCCCEEEEEECCHHCCHHHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
SPQLRRARSALASWLVASAVLLSPGLAPDVFAAGKKTITAVMHSDLRVIDPGFTTAYIT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCEEECCCCEEEEEE
RDHGYMVYDTLVATDSSFKVQPQMADWKVSDDKLTYTFTLRDGLKWHDGTPVTAEDCVAS
CCCCEEEEEEEEECCCCCEECCCCCCCEECCCEEEEEEEECCCCEECCCCCCCHHHHHHH
LKRWGRNDGMGQKLMDFTASLESPDAKTIVLKLKEPYGLVLESIGKPSSYVPFMMPKRLA
HHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHH
ETPQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNTDYVPRKEPASWTAGGKVVKVDRVE
CCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECEE
WITMPDAQTAVNAVQSGDIDFMEAPPYELLPVLEANSELTLDVLNKFGFQTLGRMNFLNP
EEECCCHHHHHHHHHCCCCCEECCCCHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
PFDNVKVRRAAFLALNQKDVLDALVGNAKYQKICGAVFVCGTPLETDVGAETLIKGNGMA
CCCCCEEHHHHEEECCHHHHHHHHHCCCHHHHHHCEEEECCCCCCCCCCCHHEEECCCHH
EAKKLLAESGYDGTPIAIMAPGDVVTLKAQPIVAAQLLREAGFKVDLQATDWQTVVTRRA
HHHHHHHHCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHCCCEEEEECCCHHHHHHHHH
SQKPVKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDADIEKLRDAFARAS
CCCCHHHCCCCEEEECCCCCHHCCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCC
SPEEQKKIATEIQKLNYERVIYIPLGQYLGPSVWRKSLSGVLDGPATPVFWNIEKKD
CCHHHHHHHHHHHHCCCCEEEEEECCHHCCHHHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]