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The map label for this gene is yliB [C]

Identifier: 146339919

GI number: 146339919

Start: 3125852

End: 3127459

Strand: Direct

Name: yliB [C]

Synonym: BRADO2923

Alternate gene names: 146339919

Gene position: 3125852-3127459 (Clockwise)

Preceding gene: 146339910

Following gene: 146339920

Centisome position: 41.92

GC content: 63.68

Gene sequence:

>1608_bases
ATGTTCCATATTTCGCGCCGGAAAGGTCTGGCGCTCGCCACCGCCGTTGCCATGCTCTCGCTCTCGACGGCGGTGAGCAC
ACGGGCCCTGGCGGCCGGCAAGACGACGATCACTGCCGTGATGCATTCGGACCTGCGCGTGATCGATCCTGGATTCACCA
CGGCCTACATCACCCGTGACCACGGCTACATGGTCTACGACACGCTGCTGGCGACCGATTCGAATTTCAAGGTCCAGCCG
CAGATGGCGGACTGGAAGGTCTCGGACGACAAGCTGACCTACACCTTCACCCTGCGTGATGGTCTGAAGTGGCACGACGG
TGCTCCCGTGACGGCGGAGGACTGCGTCGCTTCGCTGAAGCGCTGGGGCCGCAATGACGGCATGGGCCAGAAGCTGATGG
ACTTTACGGCGAGCCTCGAAGCGCCGGATGCCAAGACCATCGTGCTGAAGTTGAAGGAGCCCTACGGCCTCGTGCTGGAG
TCGATCGCCAAGCCATCGTCGCTGGTGCCGTTCATGATGCCGAAGCGTCTCGCCGAGACGCCGCAGGGCCAGCAGATTCC
GGAGCAGATCGGCTCGGGTCCGTTCAAGTTCGTCAAGGCTGAATTCCAGCCGGGCGTGAAGGCGGTGTACGAAAAGAACG
CCGACTACGTGCCGCGCAAGGAGCCCGCGAGCTGGACGTCGGGCGGCAAGGTCGTGAAGGTCGATCGCGTCGAATGGATC
ACGATGCCGGACGCGCAGACCGCGGTGAACGCGTTGCAGTCGGGCGACATCGACTTCATGGAAAACCTTCCCTACGACAT
GCTGCCGGTGCTGGAGGCGAGCCCGGATCTGAAGATCGACGTGCTCAACAAGTTCGGCTATCAGACCCTCGGCCGCATGA
ACTTCCTGCATCCGCCGTTCGACAATGTGAAAGTTCGCCGCGCCGCGTTCCTGGCGTTGAACCAGAAGGACGTGCTCGAC
GCGCTGGTCGGCAATGCCAAGTATCAGAAGGTCTGCGGCGCGGTGTTCGTGTGCGGCACGCCGCTCGAGACCGATGTTGG
CGCCGAGACGCTGATCAAGGGCAACGGCATGGCGGAAGCCAAGAAGGTGCTCGCCGAGTCCGGCTATGACGGCACGCCCA
TCGCAATCATGGCGCCCGGCGACGTCACCACGCTGAAGGCACAGCCGGTGGTTGCGGCGCAGCTGCTGCGCGAAGCCGGT
TTCAAGGTCGATCTTCAGGCAACGGACTGGCAGACCGTGGTGACGCGGCGCGCCAGCCAGAAGCCGATCAAGGAAGGCGG
CTGGAACATGTTCTTCACCAACTGGGTCGGTGCGGACGTGGCCAATCCGGTCGCGAACGTCTCGGTCGGCGGCCGCGGCA
CCAAGGGCGGCTGGTTCGGCTGGGCCGAGGATGCCGAGGTCGAGAAGCTGCGCGACGCCTATGCGCGCTCATCCTCGCCT
GACGAGCAGAAGAAGATCGCGACCGAGATCCAGAAGCTGAACTACGAGAAGGTGCTCTACATCCCGCTCGGCCAGTATTT
GCTGCCGAGCGGCTGGCGCAAGTCGCTGACCGGCGTGCTCGACGGCCCGGCGACGCCGGTGTTCTGGAATATCGACAAGA
GCGAGTAG

Upstream 100 bases:

>100_bases
CAGCGTGTTAGTTCGCCCAAGGATTGATCTGCACGCCCAACGAATGACCTGAGTCTGATCAGTTTCAGGTCAAATCATTC
GCCTCTAGGAGACTCTCGTC

Downstream 100 bases:

>100_bases
CTCGCGGGCGATTGCGAGCGATACGAGCGGCGGAGGCAACTCCGCCGCTTTTTCATGCGGTGCACCGTAGGGTGGGCAAA
GCGGCCGCCGCTAGGCGGCG

Product: putative ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MFHISRRKGLALATAVAMLSLSTAVSTRALAAGKTTITAVMHSDLRVIDPGFTTAYITRDHGYMVYDTLLATDSNFKVQP
QMADWKVSDDKLTYTFTLRDGLKWHDGAPVTAEDCVASLKRWGRNDGMGQKLMDFTASLEAPDAKTIVLKLKEPYGLVLE
SIAKPSSLVPFMMPKRLAETPQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNADYVPRKEPASWTSGGKVVKVDRVEWI
TMPDAQTAVNALQSGDIDFMENLPYDMLPVLEASPDLKIDVLNKFGYQTLGRMNFLHPPFDNVKVRRAAFLALNQKDVLD
ALVGNAKYQKVCGAVFVCGTPLETDVGAETLIKGNGMAEAKKVLAESGYDGTPIAIMAPGDVTTLKAQPVVAAQLLREAG
FKVDLQATDWQTVVTRRASQKPIKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDAEVEKLRDAYARSSSP
DEQKKIATEIQKLNYEKVLYIPLGQYLLPSGWRKSLTGVLDGPATPVFWNIDKSE

Sequences:

>Translated_535_residues
MFHISRRKGLALATAVAMLSLSTAVSTRALAAGKTTITAVMHSDLRVIDPGFTTAYITRDHGYMVYDTLLATDSNFKVQP
QMADWKVSDDKLTYTFTLRDGLKWHDGAPVTAEDCVASLKRWGRNDGMGQKLMDFTASLEAPDAKTIVLKLKEPYGLVLE
SIAKPSSLVPFMMPKRLAETPQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNADYVPRKEPASWTSGGKVVKVDRVEWI
TMPDAQTAVNALQSGDIDFMENLPYDMLPVLEASPDLKIDVLNKFGYQTLGRMNFLHPPFDNVKVRRAAFLALNQKDVLD
ALVGNAKYQKVCGAVFVCGTPLETDVGAETLIKGNGMAEAKKVLAESGYDGTPIAIMAPGDVTTLKAQPVVAAQLLREAG
FKVDLQATDWQTVVTRRASQKPIKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDAEVEKLRDAYARSSSP
DEQKKIATEIQKLNYEKVLYIPLGQYLLPSGWRKSLTGVLDGPATPVFWNIDKSE
>Mature_535_residues
MFHISRRKGLALATAVAMLSLSTAVSTRALAAGKTTITAVMHSDLRVIDPGFTTAYITRDHGYMVYDTLLATDSNFKVQP
QMADWKVSDDKLTYTFTLRDGLKWHDGAPVTAEDCVASLKRWGRNDGMGQKLMDFTASLEAPDAKTIVLKLKEPYGLVLE
SIAKPSSLVPFMMPKRLAETPQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNADYVPRKEPASWTSGGKVVKVDRVEWI
TMPDAQTAVNALQSGDIDFMENLPYDMLPVLEASPDLKIDVLNKFGYQTLGRMNFLHPPFDNVKVRRAAFLALNQKDVLD
ALVGNAKYQKVCGAVFVCGTPLETDVGAETLIKGNGMAEAKKVLAESGYDGTPIAIMAPGDVTTLKAQPVVAAQLLREAG
FKVDLQATDWQTVVTRRASQKPIKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDAEVEKLRDAYARSSSP
DEQKKIATEIQKLNYEKVLYIPLGQYLLPSGWRKSLTGVLDGPATPVFWNIDKSE

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=533, Percent_Identity=24.765478424015, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1787495, Length=472, Percent_Identity=26.0593220338983, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1789397, Length=507, Percent_Identity=22.4852071005917, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1787762, Length=565, Percent_Identity=23.716814159292, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1789887, Length=286, Percent_Identity=25.5244755244755, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081878, Length=471, Percent_Identity=22.5053078556263, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58623; Mature: 58623

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHISRRKGLALATAVAMLSLSTAVSTRALAAGKTTITAVMHSDLRVIDPGFTTAYITRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCEEEEEECC
HGYMVYDTLLATDSNFKVQPQMADWKVSDDKLTYTFTLRDGLKWHDGAPVTAEDCVASLK
CCEEEEEEEEECCCCCEECCCCCCEEECCCEEEEEEEECCCCEECCCCCCCHHHHHHHHH
RWGRNDGMGQKLMDFTASLEAPDAKTIVLKLKEPYGLVLESIAKPSSLVPFMMPKRLAET
HCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHCCHHHHCC
PQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNADYVPRKEPASWTSGGKVVKVDRVEWI
CCCCHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECEEEE
TMPDAQTAVNALQSGDIDFMENLPYDMLPVLEASPDLKIDVLNKFGYQTLGRMNFLHPPF
ECCCHHHHHHHHHCCCCHHHHCCCCHHHHHHCCCCCCEEEHHHHCCHHHHHCCCCCCCCC
DNVKVRRAAFLALNQKDVLDALVGNAKYQKVCGAVFVCGTPLETDVGAETLIKGNGMAEA
CCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHCEEEEECCCCCCCCCCHHEEECCCHHHH
KKVLAESGYDGTPIAIMAPGDVTTLKAQPVVAAQLLREAGFKVDLQATDWQTVVTRRASQ
HHHHHHCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCC
KPIKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDAEVEKLRDAYARSSSP
CCHHHCCCCEEEECCCCCHHCCCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DEQKKIATEIQKLNYEKVLYIPLGQYLLPSGWRKSLTGVLDGPATPVFWNIDKSE
HHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MFHISRRKGLALATAVAMLSLSTAVSTRALAAGKTTITAVMHSDLRVIDPGFTTAYITRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCEEEEEECC
HGYMVYDTLLATDSNFKVQPQMADWKVSDDKLTYTFTLRDGLKWHDGAPVTAEDCVASLK
CCEEEEEEEEECCCCCEECCCCCCEEECCCEEEEEEEECCCCEECCCCCCCHHHHHHHHH
RWGRNDGMGQKLMDFTASLEAPDAKTIVLKLKEPYGLVLESIAKPSSLVPFMMPKRLAET
HCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHCCHHHHCC
PQGQQIPEQIGSGPFKFVKAEFQPGVKAVYEKNADYVPRKEPASWTSGGKVVKVDRVEWI
CCCCHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECEEEE
TMPDAQTAVNALQSGDIDFMENLPYDMLPVLEASPDLKIDVLNKFGYQTLGRMNFLHPPF
ECCCHHHHHHHHHCCCCHHHHCCCCHHHHHHCCCCCCEEEHHHHCCHHHHHCCCCCCCCC
DNVKVRRAAFLALNQKDVLDALVGNAKYQKVCGAVFVCGTPLETDVGAETLIKGNGMAEA
CCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHCEEEEECCCCCCCCCCHHEEECCCHHHH
KKVLAESGYDGTPIAIMAPGDVTTLKAQPVVAAQLLREAGFKVDLQATDWQTVVTRRASQ
HHHHHHCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCC
KPIKEGGWNMFFTNWVGADVANPVANVSVGGRGTKGGWFGWAEDAEVEKLRDAYARSSSP
CCHHHCCCCEEEECCCCCHHCCCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DEQKKIATEIQKLNYEKVLYIPLGQYLLPSGWRKSLTGVLDGPATPVFWNIDKSE
HHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]