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The map label for this gene is yliB [C]

Identifier: 146339921

GI number: 146339921

Start: 3130109

End: 3131659

Strand: Direct

Name: yliB [C]

Synonym: BRADO2925

Alternate gene names: 146339921

Gene position: 3130109-3131659 (Clockwise)

Preceding gene: 146339920

Following gene: 146339923

Centisome position: 41.98

GC content: 64.22

Gene sequence:

>1551_bases
ATGGCTGTCGCCGCGGGCACGATGTCCGGCGCGTTCGCGGCCGGCAAGAAGACCGTCACGGCGGTGATGCATTCCGATCT
GCGTGTGATCGATCCCGTGTTCACGCCCGCCTACATCACCCGGGACCACGGCTACATGGTCTATGACACCTTGCTCGGCA
CCGACGCCAAGTTCCAAGTGCAGCCGCAGATGGCCGAGTGGAAGGTCTCCGACGACAAGCTGACCTACACCTTCACTCTG
CGCGACGGCTTGGAATGGCATGACGGCACACCGGTGACGGCAGAGGACTGCGTCGCCTCGCTGAAGCGCTGGAGCCGCAA
CGACAGCATGGGCCAGAAGCTGATGGACGCCACGGCCTCGCTCGAGGCCGCCGATGCCAAGACCATCACGCTCAAGCTCA
AGGAGCCCTATGGTCTCGTGCTCGAATCGATCGGCAAGCCGTCGTCCTACGTGCCGTTCATGATGCCCAAGCGGCTCGCC
GAGACGCCCGCCAACCAGCAGATCTCCGAGCAGATCGGGTCGGGTCCGTTCAAGTTCGTGAAGAGCGAATTTCAGCCCGG
CGTGAAGGCGGTCTATGAAAAGAACACCGATTACGTGCCGCGCAAGGAGCCGCCGAGCTGGACCGCCGGCGGCAAGGTCG
TGAAGGTCGATCGCGTCGAGTGGATCGCGATGCCCGACGCACAGACCGCGGTCAACGCGCTGCAATCCGGCGACATCGAC
TTCATGGAATTTCCGCCGCTCGATCTCGAGCCGGTGCTGTCAGCCAATCCCGATCTCACCATGAATGTGCTGAACAAGTT
CGGCTACCAGACGCTGGGCCGGATGAACTTCCTGTTTCCGCCGTTCGACAATGTTAAGGTCCGCCGCGCGGCGTTCCTGG
CGCTGAACCAGAAGGACGTGCTCGACGCGCTGGTCGGCAACTCCAAATACTACACGATCTGCGGCGCCGTGTTCGGCTGC
GGCACGCCGCTCGAGACCGATATCGGCTCGGAAACACTGGTCAAGGGCAACGGCATGGAGCAGGCCAGGAAGCTGCTCAC
CGAGGCTGGCTATGACGGCACGCCGGTGGTGATCCTGGCGCCGGGCGACGCGATCACGCTGAAGGCGCAGCCGGTCATCG
CGGCGCAGCTCTTGCGCGCGGCCGGCTTCAAGGTCGATCTGCAGACCACCGACTGGCAGACCGTGGTGACGCGCCGCGCC
AGCCAGAAGCCGCCGAAGGAAGGCGGCTGGAACATGTTCTTCACCAATTCGGTGATCGCCGACTCCGGCAATCCGATCGG
CAGCACCTTCGTCAGCGCGCGCGGCCAGAAGAGCCCGTTCGGCTGGCCCGACGACCCGAAGATGGAGGAGTTGCGCGACG
CCTTCGCCAAGGCCGGCACCCCTGCGGATCAAAAGCGCATCGCCGCCGACATCCAGAAGGAGGTCTACGAGCAGGTGATC
TACGTGCCGCTCGGGCAATGGTTCATGCCGAGCGCCTGGCGCAAATCGATCAGCGGCGTGCTGGAGGGGCAGGCCGTGCC
GGTGTTCTGGAACGTCGACAAGAGCGAGTAG

Upstream 100 bases:

>100_bases
GTCAGGCCGTCGAATGGACGCTCACGTCAAGAGAGATCGCATGTCATATCCTTCGCGCCGGGCCTCCTCTGCGCTGACTT
CAATTCTGGTTGCCGCAGTC

Downstream 100 bases:

>100_bases
GGGCGCCTACGCGCCACGCCGGAATGACGCGGGGATAGAGGATCGCCTTGTGTCTTGCTGATGAGCGAGCGTAGCCCGCA
TGAGCGCAGCGAGATGCGGG

Product: putative ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MAVAAGTMSGAFAAGKKTVTAVMHSDLRVIDPVFTPAYITRDHGYMVYDTLLGTDAKFQVQPQMAEWKVSDDKLTYTFTL
RDGLEWHDGTPVTAEDCVASLKRWSRNDSMGQKLMDATASLEAADAKTITLKLKEPYGLVLESIGKPSSYVPFMMPKRLA
ETPANQQISEQIGSGPFKFVKSEFQPGVKAVYEKNTDYVPRKEPPSWTAGGKVVKVDRVEWIAMPDAQTAVNALQSGDID
FMEFPPLDLEPVLSANPDLTMNVLNKFGYQTLGRMNFLFPPFDNVKVRRAAFLALNQKDVLDALVGNSKYYTICGAVFGC
GTPLETDIGSETLVKGNGMEQARKLLTEAGYDGTPVVILAPGDAITLKAQPVIAAQLLRAAGFKVDLQTTDWQTVVTRRA
SQKPPKEGGWNMFFTNSVIADSGNPIGSTFVSARGQKSPFGWPDDPKMEELRDAFAKAGTPADQKRIAADIQKEVYEQVI
YVPLGQWFMPSAWRKSISGVLEGQAVPVFWNVDKSE

Sequences:

>Translated_516_residues
MAVAAGTMSGAFAAGKKTVTAVMHSDLRVIDPVFTPAYITRDHGYMVYDTLLGTDAKFQVQPQMAEWKVSDDKLTYTFTL
RDGLEWHDGTPVTAEDCVASLKRWSRNDSMGQKLMDATASLEAADAKTITLKLKEPYGLVLESIGKPSSYVPFMMPKRLA
ETPANQQISEQIGSGPFKFVKSEFQPGVKAVYEKNTDYVPRKEPPSWTAGGKVVKVDRVEWIAMPDAQTAVNALQSGDID
FMEFPPLDLEPVLSANPDLTMNVLNKFGYQTLGRMNFLFPPFDNVKVRRAAFLALNQKDVLDALVGNSKYYTICGAVFGC
GTPLETDIGSETLVKGNGMEQARKLLTEAGYDGTPVVILAPGDAITLKAQPVIAAQLLRAAGFKVDLQTTDWQTVVTRRA
SQKPPKEGGWNMFFTNSVIADSGNPIGSTFVSARGQKSPFGWPDDPKMEELRDAFAKAGTPADQKRIAADIQKEVYEQVI
YVPLGQWFMPSAWRKSISGVLEGQAVPVFWNVDKSE
>Mature_515_residues
AVAAGTMSGAFAAGKKTVTAVMHSDLRVIDPVFTPAYITRDHGYMVYDTLLGTDAKFQVQPQMAEWKVSDDKLTYTFTLR
DGLEWHDGTPVTAEDCVASLKRWSRNDSMGQKLMDATASLEAADAKTITLKLKEPYGLVLESIGKPSSYVPFMMPKRLAE
TPANQQISEQIGSGPFKFVKSEFQPGVKAVYEKNTDYVPRKEPPSWTAGGKVVKVDRVEWIAMPDAQTAVNALQSGDIDF
MEFPPLDLEPVLSANPDLTMNVLNKFGYQTLGRMNFLFPPFDNVKVRRAAFLALNQKDVLDALVGNSKYYTICGAVFGCG
TPLETDIGSETLVKGNGMEQARKLLTEAGYDGTPVVILAPGDAITLKAQPVIAAQLLRAAGFKVDLQTTDWQTVVTRRAS
QKPPKEGGWNMFFTNSVIADSGNPIGSTFVSARGQKSPFGWPDDPKMEELRDAFAKAGTPADQKRIAADIQKEVYEQVIY
VPLGQWFMPSAWRKSISGVLEGQAVPVFWNVDKSE

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=519, Percent_Identity=24.2774566473988, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1789397, Length=448, Percent_Identity=25.8928571428571, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789887, Length=465, Percent_Identity=22.3655913978495, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1787762, Length=256, Percent_Identity=26.5625, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081878, Length=439, Percent_Identity=23.0068337129841, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 56611; Mature: 56480

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAAGTMSGAFAAGKKTVTAVMHSDLRVIDPVFTPAYITRDHGYMVYDTLLGTDAKFQV
CCEECCCCCCHHHCCCHHHHHHHHCCCHHCCCCCCCEEEECCCCEEEEEEHHCCCCEEEE
QPQMAEWKVSDDKLTYTFTLRDGLEWHDGTPVTAEDCVASLKRWSRNDSMGQKLMDATAS
CCCHHCEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
LEAADAKTITLKLKEPYGLVLESIGKPSSYVPFMMPKRLAETPANQQISEQIGSGPFKFV
CCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCHHHHH
KSEFQPGVKAVYEKNTDYVPRKEPPSWTAGGKVVKVDRVEWIAMPDAQTAVNALQSGDID
HHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCHHHHHHHHHCCCCC
FMEFPPLDLEPVLSANPDLTMNVLNKFGYQTLGRMNFLFPPFDNVKVRRAAFLALNQKDV
EEECCCCCCCHHHCCCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHH
LDALVGNSKYYTICGAVFGCGTPLETDIGSETLVKGNGMEQARKLLTEAGYDGTPVVILA
HHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEE
PGDAITLKAQPVIAAQLLRAAGFKVDLQTTDWQTVVTRRASQKPPKEGGWNMFFTNSVIA
CCCEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEECEEEE
DSGNPIGSTFVSARGQKSPFGWPDDPKMEELRDAFAKAGTPADQKRIAADIQKEVYEQVI
CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEE
YVPLGQWFMPSAWRKSISGVLEGQAVPVFWNVDKSE
EEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure 
AVAAGTMSGAFAAGKKTVTAVMHSDLRVIDPVFTPAYITRDHGYMVYDTLLGTDAKFQV
CEECCCCCCHHHCCCHHHHHHHHCCCHHCCCCCCCEEEECCCCEEEEEEHHCCCCEEEE
QPQMAEWKVSDDKLTYTFTLRDGLEWHDGTPVTAEDCVASLKRWSRNDSMGQKLMDATAS
CCCHHCEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
LEAADAKTITLKLKEPYGLVLESIGKPSSYVPFMMPKRLAETPANQQISEQIGSGPFKFV
CCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCHHHHH
KSEFQPGVKAVYEKNTDYVPRKEPPSWTAGGKVVKVDRVEWIAMPDAQTAVNALQSGDID
HHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCHHHHHHHHHCCCCC
FMEFPPLDLEPVLSANPDLTMNVLNKFGYQTLGRMNFLFPPFDNVKVRRAAFLALNQKDV
EEECCCCCCCHHHCCCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHH
LDALVGNSKYYTICGAVFGCGTPLETDIGSETLVKGNGMEQARKLLTEAGYDGTPVVILA
HHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEE
PGDAITLKAQPVIAAQLLRAAGFKVDLQTTDWQTVVTRRASQKPPKEGGWNMFFTNSVIA
CCCEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEECEEEE
DSGNPIGSTFVSARGQKSPFGWPDDPKMEELRDAFAKAGTPADQKRIAADIQKEVYEQVI
CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEE
YVPLGQWFMPSAWRKSISGVLEGQAVPVFWNVDKSE
EEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]