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The map label for this gene is ylbA [H]

Identifier: 146339839

GI number: 146339839

Start: 3042533

End: 3043363

Strand: Reverse

Name: ylbA [H]

Synonym: BRADO2840

Alternate gene names: 146339839

Gene position: 3043363-3042533 (Counterclockwise)

Preceding gene: 146339840

Following gene: 146339829

Centisome position: 40.81

GC content: 67.99

Gene sequence:

>831_bases
ATGGACAAGCCGAACTACTTCGTGCCGCAGGGCGGCCATCCGCCGCAGACCGACCTGCTGACGGGGCGCGCCGTGTTCAC
CGAGGCCTATGCGGTCATCCCCAAGGGCGTGATGCGCGACATCGTCACCTCGCCGCTGCCGTTCTGGGACAAGACGCGGA
CCTGGGTGATCGCGCGTCCCCTGTCCGGCTTCTCGGAGACATTCTCGCAATACATCGTCGAGGTCTCGCCCGGCGGCGGC
AGCAGTCAGCCGGAGCCTGATCCGGAGGCCGAGGGCGTGCTGTTCGTCGTGTCAGGCGAGATCGCGCTGACCATCGCCGG
CACCACGCATCGCCTGGCCAAGGGCGGCTACGCCTTCCTGCCGCCGTCCTGCAAATGGACGCTGACCAACGACAGCGCGG
CACCCGCGACCTTTCACTGGATCCGCAAGGCCTATGAGGCCGTCCCCGGCATCGCCGCGCCCGAGCCCTTCGTCACCAAC
GAGGCGACGATCGCGCCGGTCGGGATGCCCGGCACCGAGGGCCGCTGGGCCACCACGCGCTTCGTCGATCCGCTCGACGT
CCGCCACGACATGCACGTCAACATCGTCACCTTCGAGCCCGGCGCCGTCATCCCGTTCCTGGAGACCCATGTCATGGAGC
ACGGCCTCTACGTGCTCGAAGGCAAGGCGGTCTACAAGCTCAACCGCGACTGGGTCGAGGTCGAGGCCGGCGACTTCATG
TGGCTGCGCGCCTTCTGCCCGCAAGCCTGCTACGCCGGCGGCCCCGGCCGCTTCCGCTATCTGCTGTACAAGGACTCCAA
CCGGCACATGAAGCTGCGGCCGTTCCGGTGA

Upstream 100 bases:

>100_bases
CGACAATCTCGAGGAACGGTGGCTCGACCAGCCGCTGTTTTTGAGCATCCCCTGAACGATGGCGCGCGCACTCGACGAGC
CGCGCGCAGGAGAGACGACG

Downstream 100 bases:

>100_bases
GGTCGCCTGCTCCGCACGATGCCGTCCAGTAGCCCGCATGAGCGCAGCGACATGCGGGATCGACGCAACAGCGCGTGAGA
CCCTACGAGATCGCGACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MDKPNYFVPQGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSPLPFWDKTRTWVIARPLSGFSETFSQYIVEVSPGGG
SSQPEPDPEAEGVLFVVSGEIALTIAGTTHRLAKGGYAFLPPSCKWTLTNDSAAPATFHWIRKAYEAVPGIAAPEPFVTN
EATIAPVGMPGTEGRWATTRFVDPLDVRHDMHVNIVTFEPGAVIPFLETHVMEHGLYVLEGKAVYKLNRDWVEVEAGDFM
WLRAFCPQACYAGGPGRFRYLLYKDSNRHMKLRPFR

Sequences:

>Translated_276_residues
MDKPNYFVPQGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSPLPFWDKTRTWVIARPLSGFSETFSQYIVEVSPGGG
SSQPEPDPEAEGVLFVVSGEIALTIAGTTHRLAKGGYAFLPPSCKWTLTNDSAAPATFHWIRKAYEAVPGIAAPEPFVTN
EATIAPVGMPGTEGRWATTRFVDPLDVRHDMHVNIVTFEPGAVIPFLETHVMEHGLYVLEGKAVYKLNRDWVEVEAGDFM
WLRAFCPQACYAGGPGRFRYLLYKDSNRHMKLRPFR
>Mature_276_residues
MDKPNYFVPQGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSPLPFWDKTRTWVIARPLSGFSETFSQYIVEVSPGGG
SSQPEPDPEAEGVLFVVSGEIALTIAGTTHRLAKGGYAFLPPSCKWTLTNDSAAPATFHWIRKAYEAVPGIAAPEPFVTN
EATIAPVGMPGTEGRWATTRFVDPLDVRHDMHVNIVTFEPGAVIPFLETHVMEHGLYVLEGKAVYKLNRDWVEVEAGDFM
WLRAFCPQACYAGGPGRFRYLLYKDSNRHMKLRPFR

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=260, Percent_Identity=30.7692307692308, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 30627; Mature: 30627

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPNYFVPQGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSPLPFWDKTRTWVIARP
CCCCCEECCCCCCCCCCCEEECHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEEC
LSGFSETFSQYIVEVSPGGGSSQPEPDPEAEGVLFVVSGEIALTIAGTTHRLAKGGYAFL
CCCHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCHHHHHCCCEEEE
PPSCKWTLTNDSAAPATFHWIRKAYEAVPGIAAPEPFVTNEATIAPVGMPGTEGRWATTR
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE
FVDPLDVRHDMHVNIVTFEPGAVIPFLETHVMEHGLYVLEGKAVYKLNRDWVEVEAGDFM
CCCCHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEE
WLRAFCPQACYAGGPGRFRYLLYKDSNRHMKLRPFR
EEHHHCCHHHHCCCCCCEEEEEEECCCCEEEEECCC
>Mature Secondary Structure
MDKPNYFVPQGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSPLPFWDKTRTWVIARP
CCCCCEECCCCCCCCCCCEEECHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEEC
LSGFSETFSQYIVEVSPGGGSSQPEPDPEAEGVLFVVSGEIALTIAGTTHRLAKGGYAFL
CCCHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCHHHHHCCCEEEE
PPSCKWTLTNDSAAPATFHWIRKAYEAVPGIAAPEPFVTNEATIAPVGMPGTEGRWATTR
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE
FVDPLDVRHDMHVNIVTFEPGAVIPFLETHVMEHGLYVLEGKAVYKLNRDWVEVEAGDFM
CCCCHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEE
WLRAFCPQACYAGGPGRFRYLLYKDSNRHMKLRPFR
EEHHHCCHHHHCCCCCCEEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]