Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is allA [H]

Identifier: 146339840

GI number: 146339840

Start: 3043409

End: 3043894

Strand: Reverse

Name: allA [H]

Synonym: BRADO2841

Alternate gene names: 146339840

Gene position: 3043894-3043409 (Counterclockwise)

Preceding gene: 146339841

Following gene: 146339839

Centisome position: 40.82

GC content: 64.61

Gene sequence:

>486_bases
ATGCATATGCTCACACCGCGGCCGCTGACGAAGGCGGCCTTCGCTGCCTTCGGCGACGTCGTCGAGACCGACGGCGCCCC
GCCGATCGAGATCAACCAGGGCTTTGCCCGCCGCTGCAACGAGCTCGCCGCCATCGACGTGACCTCGGGCGGCATCGATG
TCAATATCAGCCTGTTCGAGGCCAAGCCGCGGCCGCGGCCGATCGAAATCAAGCTGATGGAACGGCATCCGCTCGGCACG
CAGCTGTTCATGCCGCTGCAGGACCGCCCTTGGCTGGTGCTCGTCTGCACCGATCCGCATGATGCCGCGAGCTACCAAGC
CTTCACCGCCACTGGACGCCAGGGCGTGAACTACGCCCGCAACGTCTGGCATCATCCCCTCTTGGTCTTCGACGAGGCCT
CACGTTTCATGGTGGTCGACCGCATGAGCCCCGACAATCTCGAGGAACGGTGGCTCGACCAGCCGCTGTTTTTGAGCATC
CCCTGA

Upstream 100 bases:

>100_bases
CAAGGGCGGCACGATGGAAGCCTATCGCAGCAACATCGCCGCGATCCGTGATGCCGCCGCGACGGCGCGCGGCGAAGCGA
TCTGAGGCGATCGACGGCTC

Downstream 100 bases:

>100_bases
ACGATGGCGCGCGCACTCGACGAGCCGCGCGCAGGAGAGACGACGATGGACAAGCCGAACTACTTCGTGCCGCAGGGCGG
CCATCCGCCGCAGACCGACC

Product: ureidoglycolate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MHMLTPRPLTKAAFAAFGDVVETDGAPPIEINQGFARRCNELAAIDVTSGGIDVNISLFEAKPRPRPIEIKLMERHPLGT
QLFMPLQDRPWLVLVCTDPHDAASYQAFTATGRQGVNYARNVWHHPLLVFDEASRFMVVDRMSPDNLEERWLDQPLFLSI
P

Sequences:

>Translated_161_residues
MHMLTPRPLTKAAFAAFGDVVETDGAPPIEINQGFARRCNELAAIDVTSGGIDVNISLFEAKPRPRPIEIKLMERHPLGT
QLFMPLQDRPWLVLVCTDPHDAASYQAFTATGRQGVNYARNVWHHPLLVFDEASRFMVVDRMSPDNLEERWLDQPLFLSI
P
>Mature_161_residues
MHMLTPRPLTKAAFAAFGDVVETDGAPPIEINQGFARRCNELAAIDVTSGGIDVNISLFEAKPRPRPIEIKLMERHPLGT
QLFMPLQDRPWLVLVCTDPHDAASYQAFTATGRQGVNYARNVWHHPLLVFDEASRFMVVDRMSPDNLEERWLDQPLFLSI
P

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]

COG id: COG3194

COG function: function code F; Ureidoglycolate hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureidoglycolate hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1786714, Length=143, Percent_Identity=39.8601398601399, Blast_Score=116, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR007247 [H]

Pfam domain/function: PF04115 Ureidogly_hydro [H]

EC number: =3.5.3.19 [H]

Molecular weight: Translated: 18164; Mature: 18164

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMLTPRPLTKAAFAAFGDVVETDGAPPIEINQGFARRCNELAAIDVTSGGIDVNISLFE
CCCCCCCCHHHHHHHHHCCCEECCCCCCEEECCCHHHHCCCEEEEEEECCCEEEEEEEEE
AKPRPRPIEIKLMERHPLGTQLFMPLQDRPWLVLVCTDPHDAASYQAFTATGRQGVNYAR
CCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHH
NVWHHPLLVFDEASRFMVVDRMSPDNLEERWLDQPLFLSIP
HHHCCCEEEEECCCEEEEEECCCCCCHHHHHCCCCEEEECC
>Mature Secondary Structure
MHMLTPRPLTKAAFAAFGDVVETDGAPPIEINQGFARRCNELAAIDVTSGGIDVNISLFE
CCCCCCCCHHHHHHHHHCCCEECCCCCCEEECCCHHHHCCCEEEEEEECCCEEEEEEEEE
AKPRPRPIEIKLMERHPLGTQLFMPLQDRPWLVLVCTDPHDAASYQAFTATGRQGVNYAR
CCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHH
NVWHHPLLVFDEASRFMVVDRMSPDNLEERWLDQPLFLSIP
HHHCCCEEEEECCCEEEEEECCCCCCHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA