| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339352
Identifier: 146339352
GI number: 146339352
Start: 2485925
End: 2486884
Strand: Reverse
Name: 146339352
Synonym: BRADO2333
Alternate gene names: NA
Gene position: 2486884-2485925 (Counterclockwise)
Preceding gene: 146339363
Following gene: 146339351
Centisome position: 33.35
GC content: 65.94
Gene sequence:
>960_bases GTGGCTGAGTCCCCGGCCCCCTCTCCAGCCGTTGCATCGATCCAGGCCGTCGAAGCCGGCCTTGCCGCCCAGGGCTACAT CGCCAGCCGCCAGATCGCCACCGCCGTCTATCTGTCGCAGGCGATCGACAAGCCGATCCTGGTCGAGGGGCCCGCCGGCG TCGGCAAGACCGAGCTTGCGAAAGCGATCGCCGCCTGGCGCGGCCTGAAGATGATCCGGCTGCAGTGCTACGAAGGCCTC GACGAGGCCAAGGCGCTGTACGAGTGGAAATACGCCAAGCAGCTGCTCTACACCCAGATCCTGAAGGACAAGCTCGGCGA GGTGCTCGGCGGCGCCCAGACCCTGCATGCCGCGCTCGGTCAGCTGCAGGATTTCGGCGACGTGTTCTTCTCGAAGGAAT TCGTCGAGCCGCGGCCGCTGCTGCAGGCGCTGCTCGAGCCGAATGGCTGCGTGCTTCTGATCGACGAGATCGACAAGTCC GACGCCGAGTTCGAATCGCTGCTGCTCGAGATCCTCTCCGATTTCCAGGTCACGATCCCCGAGCTCGGCAGCATCGCCGC TGCGAAGGCGCCGACCGTGATCCTGACCTCCAACTCCGAGCGCAATCTCGGCGACGCCTTGAAGCGGCGCTGCCTGCACC TGCACATCGGCTTCCCCGAGCAGCGGCTGGAGGAGCGCATCGTCGAGAGCCGCGTGCCCGGCATCTCGCAGATCCTGCGG CGGCAGCTCGTCGCCTTCATCCACGACATCCGCACGCTCGACCTGAAGAAGCAGCCCTCCGTCAGCGAGACCATCGACTG GGCGCGCGTCCTGGTGCTGCTGCAGGCGGCCGAGCTCGGCCATGAGGTGGTGAAGGATACGCTGAACGTGCTGCTGAAAT ACGAGTCCGACATCGAGGTGGCGCAGCCGCAGGTGACGAGTTTCGTCGCCAAGGCGCAGCGCCAGAACATCTTCGGGTAG
Upstream 100 bases:
>100_bases AGGAAAAGTCAGGGTTTTCCCCTGACGCCAACGTCCAGGGACCGGAAACGCCGATCACGTCTGCGCCGGGGCCCTGATAC CAGGAAACGGAGCACCGTCA
Downstream 100 bases:
>100_bases GCGCCATGCAGGAGAACCTGCATCGGTTCTTCCGCGCGGCGCGCGGCGCCGGCGTCCACGTCTCGCCGGCCGAAAGCATC GACGCGATGCGCGCTGTGGC
Product: putative ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; AAA_5 ATPase; MoxR-Like ATPase; AAA Family ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; ATPase Central Domain-Containing Protein; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; Aaa ATPase; ATPase-Like Protein; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MAESPAPSPAVASIQAVEAGLAAQGYIASRQIATAVYLSQAIDKPILVEGPAGVGKTELAKAIAAWRGLKMIRLQCYEGL DEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQTLHAALGQLQDFGDVFFSKEFVEPRPLLQALLEPNGCVLLIDEIDKS DAEFESLLLEILSDFQVTIPELGSIAAAKAPTVILTSNSERNLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQILR RQLVAFIHDIRTLDLKKQPSVSETIDWARVLVLLQAAELGHEVVKDTLNVLLKYESDIEVAQPQVTSFVAKAQRQNIFG
Sequences:
>Translated_319_residues MAESPAPSPAVASIQAVEAGLAAQGYIASRQIATAVYLSQAIDKPILVEGPAGVGKTELAKAIAAWRGLKMIRLQCYEGL DEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQTLHAALGQLQDFGDVFFSKEFVEPRPLLQALLEPNGCVLLIDEIDKS DAEFESLLLEILSDFQVTIPELGSIAAAKAPTVILTSNSERNLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQILR RQLVAFIHDIRTLDLKKQPSVSETIDWARVLVLLQAAELGHEVVKDTLNVLLKYESDIEVAQPQVTSFVAKAQRQNIFG >Mature_318_residues AESPAPSPAVASIQAVEAGLAAQGYIASRQIATAVYLSQAIDKPILVEGPAGVGKTELAKAIAAWRGLKMIRLQCYEGLD EAKALYEWKYAKQLLYTQILKDKLGEVLGGAQTLHAALGQLQDFGDVFFSKEFVEPRPLLQALLEPNGCVLLIDEIDKSD AEFESLLLEILSDFQVTIPELGSIAAAKAPTVILTSNSERNLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQILRR QLVAFIHDIRTLDLKKQPSVSETIDWARVLVLLQAAELGHEVVKDTLNVLLKYESDIEVAQPQVTSFVAKAQRQNIFG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35058; Mature: 34927
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESPAPSPAVASIQAVEAGLAAQGYIASRQIATAVYLSQAIDKPILVEGPAGVGKTELA CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH KAIAAWRGLKMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQTLHAALG HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH QLQDFGDVFFSKEFVEPRPLLQALLEPNGCVLLIDEIDKSDAEFESLLLEILSDFQVTIP HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHH ELGSIAAAKAPTVILTSNSERNLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQILR HHCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCHHHHHH RQLVAFIHDIRTLDLKKQPSVSETIDWARVLVLLQAAELGHEVVKDTLNVLLKYESDIEV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AQPQVTSFVAKAQRQNIFG CCHHHHHHHHHHHHHCCCC >Mature Secondary Structure AESPAPSPAVASIQAVEAGLAAQGYIASRQIATAVYLSQAIDKPILVEGPAGVGKTELA CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH KAIAAWRGLKMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQTLHAALG HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH QLQDFGDVFFSKEFVEPRPLLQALLEPNGCVLLIDEIDKSDAEFESLLLEILSDFQVTIP HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHH ELGSIAAAKAPTVILTSNSERNLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQILR HHCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCHHHHHH RQLVAFIHDIRTLDLKKQPSVSETIDWARVLVLLQAAELGHEVVKDTLNVLLKYESDIEV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AQPQVTSFVAKAQRQNIFG CCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA