| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339351
Identifier: 146339351
GI number: 146339351
Start: 2484546
End: 2485919
Strand: Reverse
Name: 146339351
Synonym: BRADO2332
Alternate gene names: NA
Gene position: 2485919-2484546 (Counterclockwise)
Preceding gene: 146339352
Following gene: 146339349
Centisome position: 33.34
GC content: 68.63
Gene sequence:
>1374_bases ATGCAGGAGAACCTGCATCGGTTCTTCCGCGCGGCGCGCGGCGCCGGCGTCCACGTCTCGCCGGCCGAAAGCATCGACGC GATGCGCGCTGTGGCAAGTGTGGGTGTCGTCGATCGCACCGTGCTGCGCGACACGATGCTGCTGACCTTGGCCAAGAGCG AGGACGAGAAGAAGGCGCTCGGCGCCTGCTTCGACCTGTTCTTCGCCCATGTCGATCCGGCGCAGGCCGAGGCCAATGAC GACGCGGCGCAGGATGGCGCTTCGAGCGAGGCCCAGGCTGCGCCACCGTCGGGACAGCCGAGCGGCGGTGAGGCGAATGC CGAGCTCGGCCCCCTCGCCCAGATGCTCCTGGCGCAGAACACCGCCGACATCTCGGCCGCGATCGCCAACGCCTCCAGCG CCGTCGGCCTGTCCGAGATCCGCTATTTCACCCAGCGCGGCCTGTTCTCCAGCCGCATGCTGGAGACGATGGGCATCCAG CGGCTGCGCGACGATCTCGATGCGCTGACGGAGACCAACCCGGCGCTGGCCGAACGGCTGCAGGCCGGCCTCGACGGCCT ACGTGACACCGTACGCGACGCGGTCGCCCAGGCGCTGGCGCTGTACGGCCGCGAGGAGACCGAGAACCTGCGCCACGAGA TCCTGCGCAACGCCCAGCTGTCGCGGATCGAGCCGCGCCAGGTCGCCGAGATGCGCGCGCTAATCCGGCAGATCGCCCGC CGCCTGCGCGAGCGCTACAGCAAGCCGCGCAAGCGCCAGCGCCGCGGCCATCTCGATATCAGACGCACGCTCCGCCGCAA CGCCGCCTGGGGCAGCGTCCCCTTCCTCACCGCCTGGAAGCGGAAGCACCGCGACCGCCCGAAGATCGTGGCGCTGTGCG ACGTCTCCGGCTCGGTCGCCCGCGTCTCCGACTTCTTCCTGCTGCTGATCCACAGCCTGCACGACGTCGTCAGCGACGTC CGCTCGTTCGCCTTCTCCGGCCATCTGATCGAGGTCAGCGAGATCCTGGAGCAGAAATCGGCCGAGGAGGCGATGGCCGA GATCATGCACAAGGTCGGCTTCGGCTCGTCCGACTACGGCTCGTCGCTGGTCGATTTCGAAAGGCAGTTCATGGCCTCGG TGACCCCGCAGACCACCGTGATCGTGCTGGGCGACGCCCGCAGCAACAAGCTCGATCCGCGCGCGGATATTTTGAAAGCC ATCTCCGAACGCGCCAAGCGCGTCGTCTGGCTCAACCCCGAGGGCCGCGTCACCTGGGGCTGGGGCGATTCCGAAATGCC GCGCTACCAGACCTTCTGCAACGTGGTGCGCCCCTGCGCGACGGCGCAGCAGCTGGAGCGCGCGGTGAGCGACATCGTCT CGGCGTATCAGTAG
Upstream 100 bases:
>100_bases ACGTGCTGCTGAAATACGAGTCCGACATCGAGGTGGCGCAGCCGCAGGTGACGAGTTTCGTCGCCAAGGCGCAGCGCCAG AACATCTTCGGGTAGGCGCC
Downstream 100 bases:
>100_bases GCCACTGCTCTCTATCCACGCGTCATTGCGAGCGCAGCGAAGCAATCCAGGGCCGTTTCCATAACTCTGGATTGCTTCGT CGCTGCGCTCCTCGCAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Domain Containing CoxE-Like Protein; Von Willebrand Factor Type A Domain-Containing Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; VWA Containing CoxE-Like Protein; Vwa Containing Coxe Family Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain-Containing Protein; Vwa Domain Coxe-Like Protein; VWA Domain Protein
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MQENLHRFFRAARGAGVHVSPAESIDAMRAVASVGVVDRTVLRDTMLLTLAKSEDEKKALGACFDLFFAHVDPAQAEAND DAAQDGASSEAQAAPPSGQPSGGEANAELGPLAQMLLAQNTADISAAIANASSAVGLSEIRYFTQRGLFSSRMLETMGIQ RLRDDLDALTETNPALAERLQAGLDGLRDTVRDAVAQALALYGREETENLRHEILRNAQLSRIEPRQVAEMRALIRQIAR RLRERYSKPRKRQRRGHLDIRRTLRRNAAWGSVPFLTAWKRKHRDRPKIVALCDVSGSVARVSDFFLLLIHSLHDVVSDV RSFAFSGHLIEVSEILEQKSAEEAMAEIMHKVGFGSSDYGSSLVDFERQFMASVTPQTTVIVLGDARSNKLDPRADILKA ISERAKRVVWLNPEGRVTWGWGDSEMPRYQTFCNVVRPCATAQQLERAVSDIVSAYQ
Sequences:
>Translated_457_residues MQENLHRFFRAARGAGVHVSPAESIDAMRAVASVGVVDRTVLRDTMLLTLAKSEDEKKALGACFDLFFAHVDPAQAEAND DAAQDGASSEAQAAPPSGQPSGGEANAELGPLAQMLLAQNTADISAAIANASSAVGLSEIRYFTQRGLFSSRMLETMGIQ RLRDDLDALTETNPALAERLQAGLDGLRDTVRDAVAQALALYGREETENLRHEILRNAQLSRIEPRQVAEMRALIRQIAR RLRERYSKPRKRQRRGHLDIRRTLRRNAAWGSVPFLTAWKRKHRDRPKIVALCDVSGSVARVSDFFLLLIHSLHDVVSDV RSFAFSGHLIEVSEILEQKSAEEAMAEIMHKVGFGSSDYGSSLVDFERQFMASVTPQTTVIVLGDARSNKLDPRADILKA ISERAKRVVWLNPEGRVTWGWGDSEMPRYQTFCNVVRPCATAQQLERAVSDIVSAYQ >Mature_457_residues MQENLHRFFRAARGAGVHVSPAESIDAMRAVASVGVVDRTVLRDTMLLTLAKSEDEKKALGACFDLFFAHVDPAQAEAND DAAQDGASSEAQAAPPSGQPSGGEANAELGPLAQMLLAQNTADISAAIANASSAVGLSEIRYFTQRGLFSSRMLETMGIQ RLRDDLDALTETNPALAERLQAGLDGLRDTVRDAVAQALALYGREETENLRHEILRNAQLSRIEPRQVAEMRALIRQIAR RLRERYSKPRKRQRRGHLDIRRTLRRNAAWGSVPFLTAWKRKHRDRPKIVALCDVSGSVARVSDFFLLLIHSLHDVVSDV RSFAFSGHLIEVSEILEQKSAEEAMAEIMHKVGFGSSDYGSSLVDFERQFMASVTPQTTVIVLGDARSNKLDPRADILKA ISERAKRVVWLNPEGRVTWGWGDSEMPRYQTFCNVVRPCATAQQLERAVSDIVSAYQ
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50574; Mature: 50574
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQENLHRFFRAARGAGVHVSPAESIDAMRAVASVGVVDRTVLRDTMLLTLAKSEDEKKAL CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GACFDLFFAHVDPAQAEANDDAAQDGASSEAQAAPPSGQPSGGEANAELGPLAQMLLAQN HHHHHHHHHHCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC TADISAAIANASSAVGLSEIRYFTQRGLFSSRMLETMGIQRLRDDLDALTETNPALAERL CHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QAGLDGLRDTVRDAVAQALALYGREETENLRHEILRNAQLSRIEPRQVAEMRALIRQIAR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RLRERYSKPRKRQRRGHLDIRRTLRRNAAWGSVPFLTAWKRKHRDRPKIVALCDVSGSVA HHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHH RVSDFFLLLIHSLHDVVSDVRSFAFSGHLIEVSEILEQKSAEEAMAEIMHKVGFGSSDYG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSLVDFERQFMASVTPQTTVIVLGDARSNKLDPRADILKAISERAKRVVWLNPEGRVTWG HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEC WGDSEMPRYQTFCNVVRPCATAQQLERAVSDIVSAYQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQENLHRFFRAARGAGVHVSPAESIDAMRAVASVGVVDRTVLRDTMLLTLAKSEDEKKAL CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GACFDLFFAHVDPAQAEANDDAAQDGASSEAQAAPPSGQPSGGEANAELGPLAQMLLAQN HHHHHHHHHHCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC TADISAAIANASSAVGLSEIRYFTQRGLFSSRMLETMGIQRLRDDLDALTETNPALAERL CHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QAGLDGLRDTVRDAVAQALALYGREETENLRHEILRNAQLSRIEPRQVAEMRALIRQIAR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RLRERYSKPRKRQRRGHLDIRRTLRRNAAWGSVPFLTAWKRKHRDRPKIVALCDVSGSVA HHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHH RVSDFFLLLIHSLHDVVSDVRSFAFSGHLIEVSEILEQKSAEEAMAEIMHKVGFGSSDYG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSLVDFERQFMASVTPQTTVIVLGDARSNKLDPRADILKAISERAKRVVWLNPEGRVTWG HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEC WGDSEMPRYQTFCNVVRPCATAQQLERAVSDIVSAYQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA