| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146339200
Identifier: 146339200
GI number: 146339200
Start: 2295490
End: 2296044
Strand: Reverse
Name: 146339200
Synonym: BRADO2160
Alternate gene names: NA
Gene position: 2296044-2295490 (Counterclockwise)
Preceding gene: 146339201
Following gene: 146339199
Centisome position: 30.79
GC content: 65.77
Gene sequence:
>555_bases ATGAAGATCTATCTGGCAGGTCCCGACGTGTTCCTGCCGGACGCCGTTGAGATCGGCCGGCGGAAGGCCGCGATCTGCGA TCGCCACGGCTTGATCGGCCTCTATCCCCTCGACAATACCGTAGATCTCGCCGCCTCCGACGCCTCGCGCCAGATCTTCC ATGGCAACGAGGCGATGATGGATGGCGCAGATGCCATCATCGCCAATCTCACGCCGTTCCGCGGGCCCGGCGCCGATGCG GGCACGGTCTATGAGCTCGGCTACATGGCCGGCACGGGCAAGCTGTGCCTCGGCTATTGCAATGATCCCACGGTCTATGC CGAGCGCGCCCGGCGCTTCACCGCGCTCAGCGAGCAGGACGACCGCCTGGTCGATGCCGAGGGGCTAACGGTCGAGGATT TCGGCCTGCCCGACAATCTGATGATGATCCACGCACTCGAGCTGCATGGCGCATCGCTGGTGCTGCCGCGGGAGCGGCCG GCGGACGTGTGGCATGATCTGGCGGCATTCGAGGAATGCGTAAGGCTCGCGGCGGAGCGGCTGGGCGCGAGATAG
Upstream 100 bases:
>100_bases GGCATCGTCCGCAAGGTGTTCGAGGTGCTCGGCAAGGACTACGCCGCAGAGGCCGTCAAGCTCGCCTGAGGCGGGGCTTG GTAGCCGACGCTGGTGACTC
Downstream 100 bases:
>100_bases TAGGGTTGGCAAAGCGGCGCCGAAGGCGACGCGTGCCCACCGCCCTTCCGCGTTCTCAGCCGCGGCATGGTGGGCACGGC GCGTCAATTGCGATACGAGC
Product: putative nucleoside 2-deoxyribosyltransferase
Products: NA
Alternate protein names: Nucleoside 2-Deoxyribosyltransferase Protein; Nucleoside 2-Deoxyribosyltransferase Family Protein
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKIYLAGPDVFLPDAVEIGRRKAAICDRHGLIGLYPLDNTVDLAASDASRQIFHGNEAMMDGADAIIANLTPFRGPGADA GTVYELGYMAGTGKLCLGYCNDPTVYAERARRFTALSEQDDRLVDAEGLTVEDFGLPDNLMMIHALELHGASLVLPRERP ADVWHDLAAFEECVRLAAERLGAR
Sequences:
>Translated_184_residues MKIYLAGPDVFLPDAVEIGRRKAAICDRHGLIGLYPLDNTVDLAASDASRQIFHGNEAMMDGADAIIANLTPFRGPGADA GTVYELGYMAGTGKLCLGYCNDPTVYAERARRFTALSEQDDRLVDAEGLTVEDFGLPDNLMMIHALELHGASLVLPRERP ADVWHDLAAFEECVRLAAERLGAR >Mature_184_residues MKIYLAGPDVFLPDAVEIGRRKAAICDRHGLIGLYPLDNTVDLAASDASRQIFHGNEAMMDGADAIIANLTPFRGPGADA GTVYELGYMAGTGKLCLGYCNDPTVYAERARRFTALSEQDDRLVDAEGLTVEDFGLPDNLMMIHALELHGASLVLPRERP ADVWHDLAAFEECVRLAAERLGAR
Specific function: Unknown
COG id: COG3613
COG function: function code F; Nucleoside 2-deoxyribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19990; Mature: 19990
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYLAGPDVFLPDAVEIGRRKAAICDRHGLIGLYPLDNTVDLAASDASRQIFHGNEAMM CEEEECCCCEECCCHHHHCCHHHHHHCCCCCEEEEECCCCEEEECCCCCCCEECCCHHHH DGADAIIANLTPFRGPGADAGTVYELGYMAGTGKLCLGYCNDPTVYAERARRFTALSEQD CCHHHHEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCC DRLVDAEGLTVEDFGLPDNLMMIHALELHGASLVLPRERPADVWHDLAAFEECVRLAAER CCEECCCCCEEECCCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH LGAR HCCC >Mature Secondary Structure MKIYLAGPDVFLPDAVEIGRRKAAICDRHGLIGLYPLDNTVDLAASDASRQIFHGNEAMM CEEEECCCCEECCCHHHHCCHHHHHHCCCCCEEEEECCCCEEEECCCCCCCEECCCHHHH DGADAIIANLTPFRGPGADAGTVYELGYMAGTGKLCLGYCNDPTVYAERARRFTALSEQD CCHHHHEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCC DRLVDAEGLTVEDFGLPDNLMMIHALELHGASLVLPRERPADVWHDLAAFEECVRLAAER CCEECCCCCEEECCCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH LGAR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA