| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is bchE [H]
Identifier: 146339113
GI number: 146339113
Start: 2204060
End: 2205349
Strand: Reverse
Name: bchE [H]
Synonym: BRADO2067
Alternate gene names: 146339113
Gene position: 2205349-2204060 (Counterclockwise)
Preceding gene: 146339114
Following gene: 146339112
Centisome position: 29.58
GC content: 66.05
Gene sequence:
>1290_bases ATGACCCGCGTCGCCCTGATCAATCCGAACTGGACGTTCGACGGCAGCATCTATTTCGGCTGCCGCAGCCCGCATCTGCC GATCGAGCTCGGCATTTCCGAGCATCTGCTGCGCCAGGCCGGCCACGCCACGCTGCTGCTGGATGCCCACATGTTCGACC TGTCGCCGTCGGATATCCTCGCCGAGCTCGCGGCGTTCCGGCCTGACATGATCGTGCTCACCACAGCGCCGACCTATCTG TTCTGGCGCTGCGCACCGCCCGAGCTGCGCGTGCCGCAGGAGTTGGTCATGACACTGCGCGAGAGCGGCGCCGTGCTCGT CGCGGTCGGTCCGCACGGCTCGACGACGCCCCGAATGACGTTGCGCAAGCTCCGTGTCGACGTCGTCGTGATGGGCGAAT GCGAGCACAGCATTGTGCGGCTGGCGAATGGCGAGCGCGATTTCGCCGGCATCTGCTTCAAGGCCGCCAATGGCGACGTG ACCGTTCATGGCGGACCGCAGGCCGCGATGTTCACCGATCAGCCGGCGCTGCAATGGCCGGCGGAGATGATCCGCCGGCA TCATCATCACCATCACCGCTTCGAGGCGACACCAGTCGGCCCCGGCGCGGAGGTCGAGGGGTCGCGCGGCTGTCCCTATC ACTGCACGTTCTGCGCCAAGGACCATTTCCGCAACGGATATCGCAAGCGGCCGTCCGCCGTGATTCTCGACGAGGTCGAT CGCCTGCGGACGCAAGGCGTGGAGTATGTCTACTTCATCGACGAGATCTTCCTGCCCAATGCCGAGCTGCTGCAGGGCCT GGTCGCCCGCGGGCTCAAATTCGGCGTGCAGACTCGCATCGATCTCTGGAAGCCGGAGATGCTCGAGCTGCTCGGGCGCG CCGGCTGCGTGTCGATCGAGGCCGGCATCGAGAGCCTGACGCCGGAGGGCCGCGCCGCGCTGGCCAAGAATTGCCGGATG ACGACTGAGCAGCTCGCCGACCGATTGATCGAGGCGCGGCGGCACGTGCCCTTCGTCCAGGCCAATCTGATCGAGATGCC GCAGGACGACGATCCCGTCGTACAGCGCTGGCGGCAACGGATGCAGGGTGCCGGCGTGTGGGCCAACGATCCGGTGCCGC TCTATCCCTATCCGGGCTCGCCGGACTACCAGAAGCTCTGGGGCGTTCCGGACGATCAATCCTGGGAGCGCGCGCACACG CACTATTTGGAGCTGTTCAGCAAGTTCAGCGACGTGCAAAACGAGCGACCGATCCCGCTTGCCGCCCTCGAGCTGCAGGT CGCGCCATGA
Upstream 100 bases:
>100_bases CGACCGGATGGCGGCCGCGGACATCCTTCGTCGAGGGACTTCGCGAGTTGCATGGCTGGCTGGCAACCCGCTTCGCCGAA CGCGGCCAGGGGGCGCTGGC
Downstream 100 bases:
>100_bases GCACGCTCGCCGGCGTCCGTGTCCTGATGACGACCGATGCCGTCGGCGGCGTTTGGAGCTACGCGACGGCTCTGTCCGTG GCCCTGGCCGCCCGCAATGC
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTRVALINPNWTFDGSIYFGCRSPHLPIELGISEHLLRQAGHATLLLDAHMFDLSPSDILAELAAFRPDMIVLTTAPTYL FWRCAPPELRVPQELVMTLRESGAVLVAVGPHGSTTPRMTLRKLRVDVVVMGECEHSIVRLANGERDFAGICFKAANGDV TVHGGPQAAMFTDQPALQWPAEMIRRHHHHHHRFEATPVGPGAEVEGSRGCPYHCTFCAKDHFRNGYRKRPSAVILDEVD RLRTQGVEYVYFIDEIFLPNAELLQGLVARGLKFGVQTRIDLWKPEMLELLGRAGCVSIEAGIESLTPEGRAALAKNCRM TTEQLADRLIEARRHVPFVQANLIEMPQDDDPVVQRWRQRMQGAGVWANDPVPLYPYPGSPDYQKLWGVPDDQSWERAHT HYLELFSKFSDVQNERPIPLAALELQVAP
Sequences:
>Translated_429_residues MTRVALINPNWTFDGSIYFGCRSPHLPIELGISEHLLRQAGHATLLLDAHMFDLSPSDILAELAAFRPDMIVLTTAPTYL FWRCAPPELRVPQELVMTLRESGAVLVAVGPHGSTTPRMTLRKLRVDVVVMGECEHSIVRLANGERDFAGICFKAANGDV TVHGGPQAAMFTDQPALQWPAEMIRRHHHHHHRFEATPVGPGAEVEGSRGCPYHCTFCAKDHFRNGYRKRPSAVILDEVD RLRTQGVEYVYFIDEIFLPNAELLQGLVARGLKFGVQTRIDLWKPEMLELLGRAGCVSIEAGIESLTPEGRAALAKNCRM TTEQLADRLIEARRHVPFVQANLIEMPQDDDPVVQRWRQRMQGAGVWANDPVPLYPYPGSPDYQKLWGVPDDQSWERAHT HYLELFSKFSDVQNERPIPLAALELQVAP >Mature_428_residues TRVALINPNWTFDGSIYFGCRSPHLPIELGISEHLLRQAGHATLLLDAHMFDLSPSDILAELAAFRPDMIVLTTAPTYLF WRCAPPELRVPQELVMTLRESGAVLVAVGPHGSTTPRMTLRKLRVDVVVMGECEHSIVRLANGERDFAGICFKAANGDVT VHGGPQAAMFTDQPALQWPAEMIRRHHHHHHRFEATPVGPGAEVEGSRGCPYHCTFCAKDHFRNGYRKRPSAVILDEVDR LRTQGVEYVYFIDEIFLPNAELLQGLVARGLKFGVQTRIDLWKPEMLELLGRAGCVSIEAGIESLTPEGRAALAKNCRMT TEQLADRLIEARRHVPFVQANLIEMPQDDDPVVQRWRQRMQGAGVWANDPVPLYPYPGSPDYQKLWGVPDDQSWERAHTH YLELFSKFSDVQNERPIPLAALELQVAP
Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011772 - InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 48208; Mature: 48077
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVALINPNWTFDGSIYFGCRSPHLPIELGISEHLLRQAGHATLLLDAHMFDLSPSDIL CCEEEEECCCEEECCEEEEECCCCCCCEEECHHHHHHHHCCCEEEEEEEEEECCCHHHHH AELAAFRPDMIVLTTAPTYLFWRCAPPELRVPQELVMTLRESGAVLVAVGPHGSTTPRMT HHHHHCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHH LRKLRVDVVVMGECEHSIVRLANGERDFAGICFKAANGDVTVHGGPQAAMFTDQPALQWP HHHEEEEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCHHHH AEMIRRHHHHHHRFEATPVGPGAEVEGSRGCPYHCTFCAKDHFRNGYRKRPSAVILDEVD HHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCEEEEEECHHHHCCCHHCCCCEEHHHHHH RLRTQGVEYVYFIDEIFLPNAELLQGLVARGLKFGVQTRIDLWKPEMLELLGRAGCVSIE HHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCEEEEE AGIESLTPEGRAALAKNCRMTTEQLADRLIEARRHVPFVQANLIEMPQDDDPVVQRWRQR CCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCHHHHHHHHH MQGAGVWANDPVPLYPYPGSPDYQKLWGVPDDQSWERAHTHYLELFSKFSDVQNERPIPL HCCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE AALELQVAP EEEEEEECC >Mature Secondary Structure TRVALINPNWTFDGSIYFGCRSPHLPIELGISEHLLRQAGHATLLLDAHMFDLSPSDIL CEEEEECCCEEECCEEEEECCCCCCCEEECHHHHHHHHCCCEEEEEEEEEECCCHHHHH AELAAFRPDMIVLTTAPTYLFWRCAPPELRVPQELVMTLRESGAVLVAVGPHGSTTPRMT HHHHHCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHH LRKLRVDVVVMGECEHSIVRLANGERDFAGICFKAANGDVTVHGGPQAAMFTDQPALQWP HHHEEEEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCHHHH AEMIRRHHHHHHRFEATPVGPGAEVEGSRGCPYHCTFCAKDHFRNGYRKRPSAVILDEVD HHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCEEEEEECHHHHCCCHHCCCCEEHHHHHH RLRTQGVEYVYFIDEIFLPNAELLQGLVARGLKFGVQTRIDLWKPEMLELLGRAGCVSIE HHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCEEEEE AGIESLTPEGRAALAKNCRMTTEQLADRLIEARRHVPFVQANLIEMPQDDDPVVQRWRQR CCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCHHHHHHHHH MQGAGVWANDPVPLYPYPGSPDYQKLWGVPDDQSWERAHTHYLELFSKFSDVQNERPIPL HCCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE AALELQVAP EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10648776 [H]