| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339112
Identifier: 146339112
GI number: 146339112
Start: 2202939
End: 2204063
Strand: Reverse
Name: 146339112
Synonym: BRADO2066
Alternate gene names: NA
Gene position: 2204063-2202939 (Counterclockwise)
Preceding gene: 146339113
Following gene: 146339111
Centisome position: 29.56
GC content: 66.76
Gene sequence:
>1125_bases ATGAGCACGCTCGCCGGCGTCCGTGTCCTGATGACGACCGATGCCGTCGGCGGCGTTTGGAGCTACGCGACGGCTCTGTC CGTGGCCCTGGCCGCCCGCAATGCGAACGTCCACCTGGTCAGCATGGGCCGGCAACCGCGGCCGGATCAACGCGCGATGC TGAGCGGCAGCGGCGTCCGTCTGATTGAAACCGATCTCGCGCTGGAATGGCAGGACCCCGACGCCAAGCATCTCGATCAG GCGCGCCGCATGCTCCTCTCGCTGGAGCGCGAGATCAGGCCCGACATCGTGCACCTCAACAGCTTCCGCGAGGCCGCCTT CGACTGGCGCGCGCCGGTTGTCGTGGTTGCTCATTCCTGCGTTCACTCCTGGGCGAAGGCTTGCGGCGAAACCGCGTTTC TGCGGGAGCCGCGCTGGCAGCGCTATCGCGCGCTCGTCGCTGAAGGATTGCAGAACGCGGCGAGCTGGGTGGCGCCCAGT TGCGCGTTCGGCGAGGTCATCGGACGGCTGTACGAGCCGCAACGTCCGGGCGCGCTGATCTGGAATGGCATTGCCTCCCG CGGCGACGTTGAAACCCGGCAAGAGACGTTCGCCCTCGCAGCCGGACGAATGTGGGACAAAGCCAAGAATCTGCGTGCGC TGGCCGAGGCCGCCGATGGTCTGCCCTGTCCGGTTCGCGTCGCCGGAGCCGGTTCGGATGGCGCGGTGCTGTCGTCCAAT CTGCAGATGCTGGGCGAACTCTCACATCACGATCTGCGCGACTGGATGTCCCGCGCGGCGGTCTTCGTGAGCCCCGCGCT GTACGAGCCATTCGGGCTCTCGGTGCTCGAGGCGGCAAATGCCGGTTGCGCCCTGGTGCTGGCGGACATCCCGACCTTCC GCGAGCTGTGGCAGGACGCGGCGGTGTTCGTCGTCCCGACCGATGTCAAAGCCCTCAAGAGCACGCTGACTTGGCTTGCG AGTGATGACGATGCGCGCATCAGGCTGCAGGACGCCGCACGCCAGCGCGCGGCCAGATACACAATTGATCGCATGGCGGC GTCCTATGCCGAACTCTATCGCGACCTGCTGAAGCCGGCCGTTCCGGAGCATCGATCGAACACCCTCGCCGAGGCCTGTG CATGA
Upstream 100 bases:
>100_bases AGCGCGCGCACACGCACTATTTGGAGCTGTTCAGCAAGTTCAGCGACGTGCAAAACGAGCGACCGATCCCGCTTGCCGCC CTCGAGCTGCAGGTCGCGCC
Downstream 100 bases:
>100_bases AGTGCGTACTTTTCTACCATGCGTTCTCGTCGTGCTGGAACAACGGCAATGCCCACTTCGTGCGCGGCGTTGCGCGCGAG CTGCATGCGCTCGGCAACGA
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSTLAGVRVLMTTDAVGGVWSYATALSVALAARNANVHLVSMGRQPRPDQRAMLSGSGVRLIETDLALEWQDPDAKHLDQ ARRMLLSLEREIRPDIVHLNSFREAAFDWRAPVVVVAHSCVHSWAKACGETAFLREPRWQRYRALVAEGLQNAASWVAPS CAFGEVIGRLYEPQRPGALIWNGIASRGDVETRQETFALAAGRMWDKAKNLRALAEAADGLPCPVRVAGAGSDGAVLSSN LQMLGELSHHDLRDWMSRAAVFVSPALYEPFGLSVLEAANAGCALVLADIPTFRELWQDAAVFVVPTDVKALKSTLTWLA SDDDARIRLQDAARQRAARYTIDRMAASYAELYRDLLKPAVPEHRSNTLAEACA
Sequences:
>Translated_374_residues MSTLAGVRVLMTTDAVGGVWSYATALSVALAARNANVHLVSMGRQPRPDQRAMLSGSGVRLIETDLALEWQDPDAKHLDQ ARRMLLSLEREIRPDIVHLNSFREAAFDWRAPVVVVAHSCVHSWAKACGETAFLREPRWQRYRALVAEGLQNAASWVAPS CAFGEVIGRLYEPQRPGALIWNGIASRGDVETRQETFALAAGRMWDKAKNLRALAEAADGLPCPVRVAGAGSDGAVLSSN LQMLGELSHHDLRDWMSRAAVFVSPALYEPFGLSVLEAANAGCALVLADIPTFRELWQDAAVFVVPTDVKALKSTLTWLA SDDDARIRLQDAARQRAARYTIDRMAASYAELYRDLLKPAVPEHRSNTLAEACA >Mature_373_residues STLAGVRVLMTTDAVGGVWSYATALSVALAARNANVHLVSMGRQPRPDQRAMLSGSGVRLIETDLALEWQDPDAKHLDQA RRMLLSLEREIRPDIVHLNSFREAAFDWRAPVVVVAHSCVHSWAKACGETAFLREPRWQRYRALVAEGLQNAASWVAPSC AFGEVIGRLYEPQRPGALIWNGIASRGDVETRQETFALAAGRMWDKAKNLRALAEAADGLPCPVRVAGAGSDGAVLSSNL QMLGELSHHDLRDWMSRAAVFVSPALYEPFGLSVLEAANAGCALVLADIPTFRELWQDAAVFVVPTDVKALKSTLTWLAS DDDARIRLQDAARQRAARYTIDRMAASYAELYRDLLKPAVPEHRSNTLAEACA
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40938; Mature: 40807
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLAGVRVLMTTDAVGGVWSYATALSVALAARNANVHLVSMGRQPRPDQRAMLSGSGVR CCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCE LIETDLALEWQDPDAKHLDQARRMLLSLEREIRPDIVHLNSFREAAFDWRAPVVVVAHSC EEEECEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHH VHSWAKACGETAFLREPRWQRYRALVAEGLQNAASWVAPSCAFGEVIGRLYEPQRPGALI HHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEE WNGIASRGDVETRQETFALAAGRMWDKAKNLRALAEAADGLPCPVRVAGAGSDGAVLSSN ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHH LQMLGELSHHDLRDWMSRAAVFVSPALYEPFGLSVLEAANAGCALVLADIPTFRELWQDA HHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHCC AVFVVPTDVKALKSTLTWLASDDDARIRLQDAARQRAARYTIDRMAASYAELYRDLLKPA EEEEEECCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VPEHRSNTLAEACA CCCCCCCHHHHHCC >Mature Secondary Structure STLAGVRVLMTTDAVGGVWSYATALSVALAARNANVHLVSMGRQPRPDQRAMLSGSGVR CCHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCE LIETDLALEWQDPDAKHLDQARRMLLSLEREIRPDIVHLNSFREAAFDWRAPVVVVAHSC EEEECEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHH VHSWAKACGETAFLREPRWQRYRALVAEGLQNAASWVAPSCAFGEVIGRLYEPQRPGALI HHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEE WNGIASRGDVETRQETFALAAGRMWDKAKNLRALAEAADGLPCPVRVAGAGSDGAVLSSN ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHH LQMLGELSHHDLRDWMSRAAVFVSPALYEPFGLSVLEAANAGCALVLADIPTFRELWQDA HHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHCC AVFVVPTDVKALKSTLTWLASDDDARIRLQDAARQRAARYTIDRMAASYAELYRDLLKPA EEEEEECCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VPEHRSNTLAEACA CCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA