| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hyuA [C]
Identifier: 146338853
GI number: 146338853
Start: 1912364
End: 1913833
Strand: Direct
Name: hyuA [C]
Synonym: BRADO1792
Alternate gene names: 146338853
Gene position: 1912364-1913833 (Clockwise)
Preceding gene: 146338851
Following gene: 146338854
Centisome position: 25.65
GC content: 66.67
Gene sequence:
>1470_bases ATGACCGAGCCGGCCTATGACCTGATCATCCGGGGAGGGCGCGTCGCCACCACCACCGACACGTTCGAGGCCGATGTCGC CGTCTCCGGCGAGACCATCGCGGCGATCGGTCGCGGGCTCGGACCTGCGAAGCGCGAGATCGACGCGCGCGGCAAATACG TACTGCCCGGCGGCGTCGACAGCCATTGCCACATCGAGCAGCTCTCGGCCGCGGGTATCGTCAATGCAGATACGTTCGAG AGCGCGACGACCTCTGCGGCGTTTGGCGGCACGACGTCAGTGATTTCGTTCGCCGCGCAGCATGTGGGTATGCAGCTGCC GCAGGTGCTCGAGGAGTATCACGCGCTGGCGCGCAAGGGCGCGGTCATCGACTATGCGTTCCACATGATCATCGCGGATC CGACCAAGGACACCCTGGAGCGCGATCTGCCGGCGCTGATCCGGCAGGGCCACGGCTCGATCAAGATCTTCATGACCTAT GACCGGCTCAAGATCGAAGACGAGCCGCTGCTCGACATTCTCGTCGCCGCGCGCGAGGGCGGCGCGATGCTGTGCGCGCA TGCCGAGAACCACGGCATCATTTCCTGGATGGTGAAGCGGCTGCTGGCGCGCGGCTACACCGCGCCGAAATATCACGCCA TCAGCCATGCGCGGTTCTCCGAGGCGGAGGCGTTCAACCGGCTGATCGGTATGGCCGCGCTGGTCGATCAGCCGATCATG ATCTTCCACGTTTCGACCGCCGAAGGCGCCAGGGTCATCCGCGACGCGCGCGGGCAGGGGCTGAAGGTGTTCGCGGAGAC CTGCCCGCAATATCTGTTCATGACGGCCGACGATTTGGACAAGCCAGGCATCGAGGGCGCGAAGTGGATGTGCAGCCCGC CGCCGCGCCGCGCGCCGGACCAGGAGGCGCTGTGGCAGGCGCTGTCGCTCGGCGACCTGCAGACGATCTCGTCGGACCAC GCGCCGTATCGCTTCGACGAGACCGGCAAGCTGCGCGCCGGTCCCAATCCGAACTTCAAGCAGATCGCCAACGGCCTGCC GGGCCTCGAGCTGCGGCTGCCGCTGCTGTTCGACGCGATGGTGTCGAAGGGCCGGCTCGGCCTGAACAAGTTCGTCGAGC TGACGGCGACAGCGCCGGCCAAGATCTACAATCTGCATCCGCGCAAGGGCGCGATCGCGATCGGGGCCGATGCAGATATC GCGCTGTGGGATCCGGACAAGCGGGTGACGATTGCTGATGACAGCATGCACGATCTCGCCGGCTACACGCCGTTCGCGGG GCGCAGCGTGCAGGGCTGGCCTGTGACCGTTCTGTCGCGCGGTCGGGTGATTGTCGATGATGGCAAGATCGCGGTGCAGC CCGGCTCCGGCCAGTTCCTCGCCCGCAGCGGCGGCGAGGCGGCGAAGCCGACGGGACGTCTGGTGGCGGACATGGACCCC GAGCAGAACTTTGGGGCGACGCTGCTGTGA
Upstream 100 bases:
>100_bases CGTCGCGCGACAGGCAATCACTATGCCACGGCGGACGCAAGCGGGCCGGCGCGGCCTTCCAGCATCACGCCGTTCCATCT GGCAGAACTAGGAGATCGCG
Downstream 100 bases:
>100_bases GCCTGTTGGCGAAGCATCGCGGGCCTCGTCCTTCGAGACGGTCGCTTCGCGACCTCCTCAGGATGAGGGGACAGAGCAGG TCAGGCGGCGCGCACGCTGC
Product: dihydropyrimidinase
Products: 3-ureidopropanoate
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MTEPAYDLIIRGGRVATTTDTFEADVAVSGETIAAIGRGLGPAKREIDARGKYVLPGGVDSHCHIEQLSAAGIVNADTFE SATTSAAFGGTTSVISFAAQHVGMQLPQVLEEYHALARKGAVIDYAFHMIIADPTKDTLERDLPALIRQGHGSIKIFMTY DRLKIEDEPLLDILVAAREGGAMLCAHAENHGIISWMVKRLLARGYTAPKYHAISHARFSEAEAFNRLIGMAALVDQPIM IFHVSTAEGARVIRDARGQGLKVFAETCPQYLFMTADDLDKPGIEGAKWMCSPPPRRAPDQEALWQALSLGDLQTISSDH APYRFDETGKLRAGPNPNFKQIANGLPGLELRLPLLFDAMVSKGRLGLNKFVELTATAPAKIYNLHPRKGAIAIGADADI ALWDPDKRVTIADDSMHDLAGYTPFAGRSVQGWPVTVLSRGRVIVDDGKIAVQPGSGQFLARSGGEAAKPTGRLVADMDP EQNFGATLL
Sequences:
>Translated_489_residues MTEPAYDLIIRGGRVATTTDTFEADVAVSGETIAAIGRGLGPAKREIDARGKYVLPGGVDSHCHIEQLSAAGIVNADTFE SATTSAAFGGTTSVISFAAQHVGMQLPQVLEEYHALARKGAVIDYAFHMIIADPTKDTLERDLPALIRQGHGSIKIFMTY DRLKIEDEPLLDILVAAREGGAMLCAHAENHGIISWMVKRLLARGYTAPKYHAISHARFSEAEAFNRLIGMAALVDQPIM IFHVSTAEGARVIRDARGQGLKVFAETCPQYLFMTADDLDKPGIEGAKWMCSPPPRRAPDQEALWQALSLGDLQTISSDH APYRFDETGKLRAGPNPNFKQIANGLPGLELRLPLLFDAMVSKGRLGLNKFVELTATAPAKIYNLHPRKGAIAIGADADI ALWDPDKRVTIADDSMHDLAGYTPFAGRSVQGWPVTVLSRGRVIVDDGKIAVQPGSGQFLARSGGEAAKPTGRLVADMDP EQNFGATLL >Mature_488_residues TEPAYDLIIRGGRVATTTDTFEADVAVSGETIAAIGRGLGPAKREIDARGKYVLPGGVDSHCHIEQLSAAGIVNADTFES ATTSAAFGGTTSVISFAAQHVGMQLPQVLEEYHALARKGAVIDYAFHMIIADPTKDTLERDLPALIRQGHGSIKIFMTYD RLKIEDEPLLDILVAAREGGAMLCAHAENHGIISWMVKRLLARGYTAPKYHAISHARFSEAEAFNRLIGMAALVDQPIMI FHVSTAEGARVIRDARGQGLKVFAETCPQYLFMTADDLDKPGIEGAKWMCSPPPRRAPDQEALWQALSLGDLQTISSDHA PYRFDETGKLRAGPNPNFKQIANGLPGLELRLPLLFDAMVSKGRLGLNKFVELTATAPAKIYNLHPRKGAIAIGADADIA LWDPDKRVTIADDSMHDLAGYTPFAGRSVQGWPVTVLSRGRVIVDDGKIAVQPGSGQFLARSGGEAAKPTGRLVADMDPE QNFGATLL
Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin. Has no activity on dihydropyrimidines [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503051, Length=461, Percent_Identity=34.2733188720174, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI62422571, Length=461, Percent_Identity=34.2733188720174, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI190194363, Length=462, Percent_Identity=35.0649350649351, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI4503375, Length=465, Percent_Identity=34.1935483870968, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI4503377, Length=462, Percent_Identity=33.1168831168831, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI4503379, Length=462, Percent_Identity=32.034632034632, Blast_Score=232, Evalue=8e-61, Organism=Homo sapiens, GI19923821, Length=459, Percent_Identity=32.244008714597, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI18105007, Length=443, Percent_Identity=27.5395033860045, Blast_Score=120, Evalue=4e-27, Organism=Escherichia coli, GI87082175, Length=461, Percent_Identity=35.3579175704989, Blast_Score=276, Evalue=2e-75, Organism=Escherichia coli, GI1786722, Length=468, Percent_Identity=29.4871794871795, Blast_Score=171, Evalue=1e-43, Organism=Caenorhabditis elegans, GI71989490, Length=465, Percent_Identity=32.0430107526882, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17539558, Length=459, Percent_Identity=30.2832244008715, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI86575075, Length=457, Percent_Identity=24.0700218818381, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI193204318, Length=407, Percent_Identity=27.5184275184275, Blast_Score=122, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6322218, Length=432, Percent_Identity=25.462962962963, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI17137462, Length=460, Percent_Identity=31.9565217391304, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI221377917, Length=465, Percent_Identity=33.1182795698925, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI24642586, Length=429, Percent_Identity=29.3706293706294, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24644287, Length=303, Percent_Identity=31.023102310231, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI24644289, Length=234, Percent_Identity=31.6239316239316, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI18859883, Length=239, Percent_Identity=30.1255230125523, Blast_Score=103, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: 3.5.2.2
Molecular weight: Translated: 52670; Mature: 52539
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPAYDLIIRGGRVATTTDTFEADVAVSGETIAAIGRGLGPAKREIDARGKYVLPGGVD CCCCCEEEEEECCEEEEECCCCEEEEEECCCHHHHHHCCCCHHHHHHCCCCCEEECCCCC SHCHIEQLSAAGIVNADTFESATTSAAFGGTTSVISFAAQHVGMQLPQVLEEYHALARKG CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC AVIDYAFHMIIADPTKDTLERDLPALIRQGHGSIKIFMTYDRLKIEDEPLLDILVAAREG CEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEHHEECCCC GAMLCAHAENHGIISWMVKRLLARGYTAPKYHAISHARFSEAEAFNRLIGMAALVDQPIM CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IFHVSTAEGARVIRDARGQGLKVFAETCPQYLFMTADDLDKPGIEGAKWMCSPPPRRAPD EEEEECCCCHHHHHHCCCCCEEHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC QEALWQALSLGDLQTISSDHAPYRFDETGKLRAGPNPNFKQIANGLPGLELRLPLLFDAM HHHHHHHHCCCCHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCEEEHHHHHHHH VSKGRLGLNKFVELTATAPAKIYNLHPRKGAIAIGADADIALWDPDKRVTIADDSMHDLA HHCCCCCCCHHEEEEECCCEEEEECCCCCCCEEECCCCEEEEECCCCEEEEECCCHHHHC GYTPFAGRSVQGWPVTVLSRGRVIVDDGKIAVQPGSGQFLARSGGEAAKPTGRLVADMDP CCCCCCCCCCCCCCEEEEECCEEEEECCEEEEECCCCCEEEECCCCCCCCCCCEEECCCC EQNFGATLL CCCCCCCCC >Mature Secondary Structure TEPAYDLIIRGGRVATTTDTFEADVAVSGETIAAIGRGLGPAKREIDARGKYVLPGGVD CCCCEEEEEECCEEEEECCCCEEEEEECCCHHHHHHCCCCHHHHHHCCCCCEEECCCCC SHCHIEQLSAAGIVNADTFESATTSAAFGGTTSVISFAAQHVGMQLPQVLEEYHALARKG CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC AVIDYAFHMIIADPTKDTLERDLPALIRQGHGSIKIFMTYDRLKIEDEPLLDILVAAREG CEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEHHEECCCC GAMLCAHAENHGIISWMVKRLLARGYTAPKYHAISHARFSEAEAFNRLIGMAALVDQPIM CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IFHVSTAEGARVIRDARGQGLKVFAETCPQYLFMTADDLDKPGIEGAKWMCSPPPRRAPD EEEEECCCCHHHHHHCCCCCEEHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC QEALWQALSLGDLQTISSDHAPYRFDETGKLRAGPNPNFKQIANGLPGLELRLPLLFDAM HHHHHHHHCCCCHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCEEEHHHHHHHH VSKGRLGLNKFVELTATAPAKIYNLHPRKGAIAIGADADIALWDPDKRVTIADDSMHDLA HHCCCCCCCHHEEEEECCCEEEEECCCCCCCEEECCCCEEEEECCCCEEEEECCCHHHHC GYTPFAGRSVQGWPVTVLSRGRVIVDDGKIAVQPGSGQFLARSGGEAAKPTGRLVADMDP CCCCCCCCCCCCCCEEEEECCEEEEECCEEEEECCCCCEEEECCCCCCCCCCCEEECCCC EQNFGATLL CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5,6-dihydrouracil; H2O
Specific reaction: 5,6-dihydrouracil + H2O = 3-ureidopropanoate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765480 [H]