| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338851
Identifier: 146338851
GI number: 146338851
Start: 1910427
End: 1911353
Strand: Direct
Name: 146338851
Synonym: BRADO1790
Alternate gene names: NA
Gene position: 1910427-1911353 (Clockwise)
Preceding gene: 146338850
Following gene: 146338853
Centisome position: 25.62
GC content: 65.05
Gene sequence:
>927_bases ATGCGCATCATCAACGTCGCCGCCGCCCAGATGGGGCCGATCCAGCGGGCCGACAGCCGGGAGGCCGTCGTCGCACGCAT GATCGCGCTGCTGGACGAGGCCAAGCACAAGGGCGCCGACCTCATCGTCTATCCGGAGCTGGCGCTGACGACGTTCTTTC CGCGCTGGTACATGGAGGATCAGGCCGAGGTCGATACATGGTTCGAGCGTGACATGCCCAACGCCGCCGTGCAGCCGCTG TTCGATCGCGCCGCGCAGCATGAGATAGCGATGTATCTCGGCTATGCCGAGCTGACGCTGGACGGGCATCACTACAACAC GGCTGTTCTGACCGATCGCAGCAGCAACATCGTCGGCAAGTATCGCAAGGTGCATCTGCCCGGCCACGAGGAATTCGAGC CGGAGCGCAGCCACCAGCATCTGGAGAAGCGCTATTTCGAGCCGGGCGATCTCGGCTTTCCGGTCTGGCGCAATCTCGGA GGGATCGTCGGGATGGCGATCTGCAACGACCGCCGCTGGCCGGAGACGTATCGCGTGATGGGTCTGCAGGATGTCGAGCT GGTGCTGATCGGCTACAACACGCCGTCGGTGAACTCGCTGAAGTCGGCGGAAGGGCTGCAGCAGCGGCTGTTCCACAATC GTCTCTCCGCGCAGGCCGGTGCGTATCAGAACTCGTGCTGGGTGGTGGCGGTCGCCAAGGCCGGCGTCGAGGACGGCCAT CATCTGATCGGCGGCAGCCTGATCGTCAATCCCGACGGCGAGATCGTCGCGGAGGCGGTGACGGCAGGCGACGAGGTGCT GGTCGCGGCGTGCGATATGGATGCGACGCGCTTCGGCAAGCAGACGATCTTCGATTTCGCCCGGCATCGACGGGTGGAGC ACTATGGGCTGATCACCAGCCGCACGGGCGCGGTGCCGCCGGAGTGA
Upstream 100 bases:
>100_bases CCGTGCGCGGCTGTGGTGGGCACGCTTCCGCCGTCCGTCGTCGATGCACTGAGCAAGACGCCGCTTTGCCCACCCTACGG ACTGACTGTGGAGCTACACC
Downstream 100 bases:
>100_bases GGCAGTTCGTGGTCAACCAATAGCGCAGTTCCAAATTCGGTGTCGTCCCGGCGAACGCCGGGACCCATACCGCGGAATCT ATCGAGGGACGTCGCTGATA
Product: N-carbamoyl-D-amino acid hydrolase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRIINVAAAQMGPIQRADSREAVVARMIALLDEAKHKGADLIVYPELALTTFFPRWYMEDQAEVDTWFERDMPNAAVQPL FDRAAQHEIAMYLGYAELTLDGHHYNTAVLTDRSSNIVGKYRKVHLPGHEEFEPERSHQHLEKRYFEPGDLGFPVWRNLG GIVGMAICNDRRWPETYRVMGLQDVELVLIGYNTPSVNSLKSAEGLQQRLFHNRLSAQAGAYQNSCWVVAVAKAGVEDGH HLIGGSLIVNPDGEIVAEAVTAGDEVLVAACDMDATRFGKQTIFDFARHRRVEHYGLITSRTGAVPPE
Sequences:
>Translated_308_residues MRIINVAAAQMGPIQRADSREAVVARMIALLDEAKHKGADLIVYPELALTTFFPRWYMEDQAEVDTWFERDMPNAAVQPL FDRAAQHEIAMYLGYAELTLDGHHYNTAVLTDRSSNIVGKYRKVHLPGHEEFEPERSHQHLEKRYFEPGDLGFPVWRNLG GIVGMAICNDRRWPETYRVMGLQDVELVLIGYNTPSVNSLKSAEGLQQRLFHNRLSAQAGAYQNSCWVVAVAKAGVEDGH HLIGGSLIVNPDGEIVAEAVTAGDEVLVAACDMDATRFGKQTIFDFARHRRVEHYGLITSRTGAVPPE >Mature_308_residues MRIINVAAAQMGPIQRADSREAVVARMIALLDEAKHKGADLIVYPELALTTFFPRWYMEDQAEVDTWFERDMPNAAVQPL FDRAAQHEIAMYLGYAELTLDGHHYNTAVLTDRSSNIVGKYRKVHLPGHEEFEPERSHQHLEKRYFEPGDLGFPVWRNLG GIVGMAICNDRRWPETYRVMGLQDVELVLIGYNTPSVNSLKSAEGLQQRLFHNRLSAQAGAYQNSCWVVAVAKAGVEDGH HLIGGSLIVNPDGEIVAEAVTAGDEVLVAACDMDATRFGKQTIFDFARHRRVEHYGLITSRTGAVPPE
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17533173, Length=319, Percent_Identity=23.5109717868339, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 34453; Mature: 34453
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIINVAAAQMGPIQRADSREAVVARMIALLDEAKHKGADLIVYPELALTTFFPRWYMED CEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCC QAEVDTWFERDMPNAAVQPLFDRAAQHEIAMYLGYAELTLDGHHYNTAVLTDRSSNIVGK CHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCEEEEECCCCCCCCC YRKVHLPGHEEFEPERSHQHLEKRYFEPGDLGFPVWRNLGGIVGMAICNDRRWPETYRVM EEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHEEEEEECCCCCCHHHHEE GLQDVELVLIGYNTPSVNSLKSAEGLQQRLFHNRLSAQAGAYQNSCWVVAVAKAGVEDGH CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC HLIGGSLIVNPDGEIVAEAVTAGDEVLVAACDMDATRFGKQTIFDFARHRRVEHYGLITS EEECCEEEECCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCEEEC RTGAVPPE CCCCCCCC >Mature Secondary Structure MRIINVAAAQMGPIQRADSREAVVARMIALLDEAKHKGADLIVYPELALTTFFPRWYMED CEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCC QAEVDTWFERDMPNAAVQPLFDRAAQHEIAMYLGYAELTLDGHHYNTAVLTDRSSNIVGK CHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCEEEEECCCCCCCCC YRKVHLPGHEEFEPERSHQHLEKRYFEPGDLGFPVWRNLGGIVGMAICNDRRWPETYRVM EEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHEEEEEECCCCCCHHHHEE GLQDVELVLIGYNTPSVNSLKSAEGLQQRLFHNRLSAQAGAYQNSCWVVAVAKAGVEDGH CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC HLIGGSLIVNPDGEIVAEAVTAGDEVLVAACDMDATRFGKQTIFDFARHRRVEHYGLITS EEECCEEEECCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCEEEC RTGAVPPE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]