| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338313
Identifier: 146338313
GI number: 146338313
Start: 1294174
End: 1295163
Strand: Reverse
Name: 146338313
Synonym: BRADO1218
Alternate gene names: NA
Gene position: 1295163-1294174 (Counterclockwise)
Preceding gene: 146338314
Following gene: 146338307
Centisome position: 17.37
GC content: 66.77
Gene sequence:
>990_bases GTGATGCCCATCGGATTTCGCCACGGCCGCTTCACGGATGCCGCGCGGCCGAACTGGAATGGCGATGGGCCGCGCCCCAT CGACTGGTTTGCCTGGTATCCGGCCAAGGATGGCACGGCCGAAACAACGCTTCCGGTCGCCCCATGGCCGCACGGCTGGT TCAAGGCCGGACCTGCGGCTCTGGATGGGCCGCTCGCCGCGGATGGACTGTATCCGCTGGTGGTCTACTCGCACGGCACC GGCTGCAATGGCTTGCACTTCGAATGGCTCGCCCGCGCACTGGCTGCGCAGGGCTTCATCGCGGTCGCCGTCAATCATCA CGGCAACAGCAATGCCGAGCCTTACCGCGCCGAGGCCTTCCTGTGCTCGTGGGAGCGGCCGCGCGACATCTCCCTGCTGA TTGACGATATCGTCGCTGATCCCGGCTTCGCCAGCCGCATCGATCCCGATCGCATCTTCGCCGTCGGCTATTCGCTCGGC GGCGTTACCGCCACCGCCCTGCTCGGCGCCATCATGATCCGCTCGCCGTTCGCGCCCGGCGCCAATCTCGGCCGCGGCCC GCGCGAGTTTCCGGATCTCGTCGATCATCTGCCGCGGCTGATGGAGCAAAGCCCGGTGTTTCGTGACTCCTGGGCGCGGA TGTCGGCGTCGTATCATGATCGCCGCATCAAGGCGGCGCTGCTGCTGGCGCCAGGCCGGTCTGTGCAGGGCTTCTCCGAG GAGAGCGTGGCCGCGATCAACGTGCCGACGCACATCATGGTCGGCGGCGCCGATGCGCTGCTGCCCTCGGCACGTTGGCT GCACGAGCGATTGCCGGACAGCGCCTTCGATGTCGTCGCTGATGACGCCGGGCACTACGTATTCCTGCCGGAGAGCACCG AACTCGGCCGCAGTTCCGATCCGGCCAGTTGCGTCGATCCGGCATCAGTGGATCGCGGGAAGGTTCATCGCACGGTCGTC GCGGCCGCCTTGAAGCTGTTTACGCGTTAA
Upstream 100 bases:
>100_bases ACCGGCTTCATCTACGCGCTGCCGCCCGCCGCGGTGTACTACGCCTTCAAGCGCTACATGGTGGGCGGCCTCACCGCCGG CGCCGTGAAGTCGTGACGGC
Downstream 100 bases:
>100_bases TCGACGCCGCCACAGCATTCTCGGTCATCTTGGTGAGCTCCATTCGTGAGGACGGAGCAAGGCGCCACAACCTCAGCTGT CATGCCCGCGCAGGCGGGCA
Product: putative lipoprotein signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MMPIGFRHGRFTDAARPNWNGDGPRPIDWFAWYPAKDGTAETTLPVAPWPHGWFKAGPAALDGPLAADGLYPLVVYSHGT GCNGLHFEWLARALAAQGFIAVAVNHHGNSNAEPYRAEAFLCSWERPRDISLLIDDIVADPGFASRIDPDRIFAVGYSLG GVTATALLGAIMIRSPFAPGANLGRGPREFPDLVDHLPRLMEQSPVFRDSWARMSASYHDRRIKAALLLAPGRSVQGFSE ESVAAINVPTHIMVGGADALLPSARWLHERLPDSAFDVVADDAGHYVFLPESTELGRSSDPASCVDPASVDRGKVHRTVV AAALKLFTR
Sequences:
>Translated_329_residues MMPIGFRHGRFTDAARPNWNGDGPRPIDWFAWYPAKDGTAETTLPVAPWPHGWFKAGPAALDGPLAADGLYPLVVYSHGT GCNGLHFEWLARALAAQGFIAVAVNHHGNSNAEPYRAEAFLCSWERPRDISLLIDDIVADPGFASRIDPDRIFAVGYSLG GVTATALLGAIMIRSPFAPGANLGRGPREFPDLVDHLPRLMEQSPVFRDSWARMSASYHDRRIKAALLLAPGRSVQGFSE ESVAAINVPTHIMVGGADALLPSARWLHERLPDSAFDVVADDAGHYVFLPESTELGRSSDPASCVDPASVDRGKVHRTVV AAALKLFTR >Mature_329_residues MMPIGFRHGRFTDAARPNWNGDGPRPIDWFAWYPAKDGTAETTLPVAPWPHGWFKAGPAALDGPLAADGLYPLVVYSHGT GCNGLHFEWLARALAAQGFIAVAVNHHGNSNAEPYRAEAFLCSWERPRDISLLIDDIVADPGFASRIDPDRIFAVGYSLG GVTATALLGAIMIRSPFAPGANLGRGPREFPDLVDHLPRLMEQSPVFRDSWARMSASYHDRRIKAALLLAPGRSVQGFSE ESVAAINVPTHIMVGGADALLPSARWLHERLPDSAFDVVADDAGHYVFLPESTELGRSSDPASCVDPASVDRGKVHRTVV AAALKLFTR
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35606; Mature: 35606
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPIGFRHGRFTDAARPNWNGDGPRPIDWFAWYPAKDGTAETTLPVAPWPHGWFKAGPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCHHCCCCCC LDGPLAADGLYPLVVYSHGTGCNGLHFEWLARALAAQGFIAVAVNHHGNSNAEPYRAEAF CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEE LCSWERPRDISLLIDDIVADPGFASRIDPDRIFAVGYSLGGVTATALLGAIMIRSPFAPG EECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC ANLGRGPREFPDLVDHLPRLMEQSPVFRDSWARMSASYHDRRIKAALLLAPGRSVQGFSE CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCC ESVAAINVPTHIMVGGADALLPSARWLHERLPDSAFDVVADDAGHYVFLPESTELGRSSD CCEEEEECCCEEEECCHHHHCCHHHHHHHHCCCCHHHHEECCCCCEEEECCCCCCCCCCC PASCVDPASVDRGKVHRTVVAAALKLFTR CCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMPIGFRHGRFTDAARPNWNGDGPRPIDWFAWYPAKDGTAETTLPVAPWPHGWFKAGPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCHHCCCCCC LDGPLAADGLYPLVVYSHGTGCNGLHFEWLARALAAQGFIAVAVNHHGNSNAEPYRAEAF CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEE LCSWERPRDISLLIDDIVADPGFASRIDPDRIFAVGYSLGGVTATALLGAIMIRSPFAPG EECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC ANLGRGPREFPDLVDHLPRLMEQSPVFRDSWARMSASYHDRRIKAALLLAPGRSVQGFSE CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCC ESVAAINVPTHIMVGGADALLPSARWLHERLPDSAFDVVADDAGHYVFLPESTELGRSSD CCEEEEECCCEEEECCHHHHCCHHHHHHHHCCCCHHHHEECCCCCEEEECCCCCCCCCCC PASCVDPASVDRGKVHRTVVAAALKLFTR CCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA