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The map label for this gene is ycjP [H]

Identifier: 146338314

GI number: 146338314

Start: 1295168

End: 1296019

Strand: Reverse

Name: ycjP [H]

Synonym: BRADO1219

Alternate gene names: 146338314

Gene position: 1296019-1295168 (Counterclockwise)

Preceding gene: 146338315

Following gene: 146338313

Centisome position: 17.38

GC content: 63.26

Gene sequence:

>852_bases
ATGAAGCTCCCTACCCTCCGCGAGGTCGGCACCGAGGCCCGGCTGCTCTTGATCGGCATTCCCGTCTTCATCTGGACGAT
GATCCCGATCTATCACATGTTCCTGTTCGCGATCTCGCCCAAGGAGGACGCGTTCTCGGGCAAGCTGTGGCCGGACCACC
CGACCTTGCACAATTTTTCGATCGTGTTTCACCAGCAGCATTACTTCCTGCGCGACTTCTGGATCCAGTTCGGCAACTCC
GTAATCATCGCCGCCGCCGTCGGCGCGCTGACCCTGATCATCGCGACCTGCGCCGCCTATGCGATCTCGCGCCTGCGCGT
GCCGGGCAGCCGCGTGGTGATGAACCTCGCGCTGTTCACCTATTTCATCCCGGCCGCGTTCCTCGCGGTGCCGATGTATC
GCACGATGGGCAAATACGGCCTGCTCAACAATGACTGGTCGCTGATCCTGGCGATGGTCACGATCGCCTCGCCCTACGCG
ATCTGGGTGCTGAAGCAGGCGTCCGACAAGCTGCCGGTCGAGCTCGACGAAGCCGCCGTCATGGATGGCGCGAGCCCGTT
GCAGATCTTCCGCCTGGTCTACGTGCCGCTGATGATGCCGTCGCTGGTCGCGATCGGCACCTATGCGGTGCTGCTGGCCT
GGAACGAATATCTCTACGCGTTCCTGCTGCTGTCGAATGACAAGGCGATCACCCTTCCCGTGGCGCTCGGCAACTTCCTC
GCCGCCGACGATTCGCCGTGGGAGCTGCTGATGACCACCGGCTTCATCTACGCGCTGCCGCCCGCCGCGGTGTACTACGC
CTTCAAGCGCTACATGGTGGGCGGCCTCACCGCCGGCGCCGTGAAGTCGTGA

Upstream 100 bases:

>100_bases
ATCTCAGGCTCGATCAGCTCAGCCTCGCGATGGCTTCGATCGTCTGCGCGATGCCGCTGGTGCTCCCCCTGGTCTATTTC
ATGATGAAGCGGTTGTCGCG

Downstream 100 bases:

>100_bases
CGGCGTGATGCCCATCGGATTTCGCCACGGCCGCTTCACGGATGCCGCGCGGCCGAACTGGAATGGCGATGGGCCGCGCC
CCATCGACTGGTTTGCCTGG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKLPTLREVGTEARLLLIGIPVFIWTMIPIYHMFLFAISPKEDAFSGKLWPDHPTLHNFSIVFHQQHYFLRDFWIQFGNS
VIIAAAVGALTLIIATCAAYAISRLRVPGSRVVMNLALFTYFIPAAFLAVPMYRTMGKYGLLNNDWSLILAMVTIASPYA
IWVLKQASDKLPVELDEAAVMDGASPLQIFRLVYVPLMMPSLVAIGTYAVLLAWNEYLYAFLLLSNDKAITLPVALGNFL
AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS

Sequences:

>Translated_283_residues
MKLPTLREVGTEARLLLIGIPVFIWTMIPIYHMFLFAISPKEDAFSGKLWPDHPTLHNFSIVFHQQHYFLRDFWIQFGNS
VIIAAAVGALTLIIATCAAYAISRLRVPGSRVVMNLALFTYFIPAAFLAVPMYRTMGKYGLLNNDWSLILAMVTIASPYA
IWVLKQASDKLPVELDEAAVMDGASPLQIFRLVYVPLMMPSLVAIGTYAVLLAWNEYLYAFLLLSNDKAITLPVALGNFL
AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS
>Mature_283_residues
MKLPTLREVGTEARLLLIGIPVFIWTMIPIYHMFLFAISPKEDAFSGKLWPDHPTLHNFSIVFHQQHYFLRDFWIQFGNS
VIIAAAVGALTLIIATCAAYAISRLRVPGSRVVMNLALFTYFIPAAFLAVPMYRTMGKYGLLNNDWSLILAMVTIASPYA
IWVLKQASDKLPVELDEAAVMDGASPLQIFRLVYVPLMMPSLVAIGTYAVLLAWNEYLYAFLLLSNDKAITLPVALGNFL
AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=269, Percent_Identity=32.7137546468402, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1790464, Length=211, Percent_Identity=30.8056872037915, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789860, Length=267, Percent_Identity=24.7191011235955, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31471; Mature: 31471

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPTLREVGTEARLLLIGIPVFIWTMIPIYHMFLFAISPKEDAFSGKLWPDHPTLHNFS
CCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEE
IVFHQQHYFLRDFWIQFGNSVIIAAAVGALTLIIATCAAYAISRLRVPGSRVVMNLALFT
EEEECHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YFIPAAFLAVPMYRTMGKYGLLNNDWSLILAMVTIASPYAIWVLKQASDKLPVELDEAAV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCEEECHHHH
MDGASPLQIFRLVYVPLMMPSLVAIGTYAVLLAWNEYLYAFLLLSNDKAITLPVALGNFL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCC
AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS
CCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLPTLREVGTEARLLLIGIPVFIWTMIPIYHMFLFAISPKEDAFSGKLWPDHPTLHNFS
CCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEE
IVFHQQHYFLRDFWIQFGNSVIIAAAVGALTLIIATCAAYAISRLRVPGSRVVMNLALFT
EEEECHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YFIPAAFLAVPMYRTMGKYGLLNNDWSLILAMVTIASPYAIWVLKQASDKLPVELDEAAV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCEEECHHHH
MDGASPLQIFRLVYVPLMMPSLVAIGTYAVLLAWNEYLYAFLLLSNDKAITLPVALGNFL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCC
AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS
CCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]