| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338296
Identifier: 146338296
GI number: 146338296
Start: 1276159
End: 1277496
Strand: Direct
Name: 146338296
Synonym: BRADO1200
Alternate gene names: NA
Gene position: 1276159-1277496 (Clockwise)
Preceding gene: 146338295
Following gene: 146338297
Centisome position: 17.11
GC content: 65.25
Gene sequence:
>1338_bases ATGACCTGGCCGTTCGCTCTGCCATTTGCCGGGCTGCTGCTGTCGATCGCGCTCGGGCCGCTGTTGTTCGCCGGCTTCTG GCATCATCATTACGGCAAGATCGCTGCGGCATGGGCCCTGGTGACGCTGGCGGCGCTGAGCTGGCAGGCTGGGCTCGGGG CTGCGCTGGCGTCCTTCGTCCATGCGCTGCTCGCCGAATATCTCAGCTTCATCGTGCTGCTGTTCGCGCTCTACACGGTG GCCGGCGGCATCCTGGTGACGGGCGACATCAGGGGCACGCCCACGACCAACACCTCCATCCTCGCGCTGGGCACCTTCAT CGCGAGCGTCGTCGGCACGACCGGTGCGGCCATGATCCTGGTGCGCCCGCTGATCCGCGCCAATCTGGGCCGGCCGCACA ATGTGCACGTGCTGGTGTTCTTCATCATCCTCGCCGCCAATGTCGGCGGCGCGCTCAGCCCGCTCGGCGATCCGCCGCTG TTCGTCGGCTTCCTGCGCGGCGTCGATTTCTTCTGGACCACGCGCAACATCTGGCTGCAGACCGCCATCGTCGCTGGATT GCTGCTCGTGATCTTTGCCGCGATCGACGGGTGGCGCTTTCGTCAGGAAAAGCCGGCGCTGCGGGCATCCCGCACGACTG AGCCGGTGCGCGTTCGCGGCCTGGTCAACGTCGTGCTGATCGCGGCCATTGTCACCAACACGCTGGTGTCCGCCAACTGG AAGCCGGGCATTGCCTTCGACATCGTCGGCACGCATCTCGAGCTGCAGAACCTGGTTCGCGACGCCGTCCTGCTCGTCAT TGCCGGCCTGTCGCTCTGGCTCACGCCGGACGAACACCGCGAGGCGAACGGGTTCAGCTGGGAGCCGATCCGCGAGGTCG CAAAACTGTTCGCGGCAATCTTCACGGCGATCGTCCCGGTCATCGCCATGTTGAATGCCGGTCACGACGGCTCGTTCGGC TGGCTGCTGAACGCGGTGACCACACCAGCAGGCGCGCCGCGCGAGGTCGCCTATTTCTGGTTCACGGGGCTGATGTCCGC CTTCCTCGACAATGCACCGACCTATCTTTTGTTCTTTGAACTCGCGGGGGGCGACCCCAAGGTGCTGATGAGCGATCTCT CGGGCACGCTGGCGGCGATCTCGATGGGCGCGGTCTACATGGGGGCGCTGACCTATATCGGCAATGCGCCGAACTTCATG GTAGCGGCCATTGCCAATGAGCGCGGCATCCAGATGCCCAGCTTCTTCGGCTACATGGGTCGGGCGGCCGTGGTCCTGCT TCCGTTGTTCCTGCTGCTGACGCTCCTGCCGATCCATCCGCTGCTCAGCCCGCATTGA
Upstream 100 bases:
>100_bases TAGCTTTTTCCGCGTGAGCTGGCCTGCGCCGCTTCTCGCCGTGCTTCTCTCTGCAGCTCTGCCGATTCAGGCGCACGCCG CCGAGCTGAACGGCGCCGCA
Downstream 100 bases:
>100_bases AGTTGTTTCGGCCGCCATCCGAGGTTGCGTCGGTGGAGACCCGTCATGTCGGGACCCGCGTGACGCGTGCTTTGCCATCG CGCATAGTCGAATGAATGAA
Product: Na+ antiporter
Products: NA
Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTWPFALPFAGLLLSIALGPLLFAGFWHHHYGKIAAAWALVTLAALSWQAGLGAALASFVHALLAEYLSFIVLLFALYTV AGGILVTGDIRGTPTTNTSILALGTFIASVVGTTGAAMILVRPLIRANLGRPHNVHVLVFFIILAANVGGALSPLGDPPL FVGFLRGVDFFWTTRNIWLQTAIVAGLLLVIFAAIDGWRFRQEKPALRASRTTEPVRVRGLVNVVLIAAIVTNTLVSANW KPGIAFDIVGTHLELQNLVRDAVLLVIAGLSLWLTPDEHREANGFSWEPIREVAKLFAAIFTAIVPVIAMLNAGHDGSFG WLLNAVTTPAGAPREVAYFWFTGLMSAFLDNAPTYLLFFELAGGDPKVLMSDLSGTLAAISMGAVYMGALTYIGNAPNFM VAAIANERGIQMPSFFGYMGRAAVVLLPLFLLLTLLPIHPLLSPH
Sequences:
>Translated_445_residues MTWPFALPFAGLLLSIALGPLLFAGFWHHHYGKIAAAWALVTLAALSWQAGLGAALASFVHALLAEYLSFIVLLFALYTV AGGILVTGDIRGTPTTNTSILALGTFIASVVGTTGAAMILVRPLIRANLGRPHNVHVLVFFIILAANVGGALSPLGDPPL FVGFLRGVDFFWTTRNIWLQTAIVAGLLLVIFAAIDGWRFRQEKPALRASRTTEPVRVRGLVNVVLIAAIVTNTLVSANW KPGIAFDIVGTHLELQNLVRDAVLLVIAGLSLWLTPDEHREANGFSWEPIREVAKLFAAIFTAIVPVIAMLNAGHDGSFG WLLNAVTTPAGAPREVAYFWFTGLMSAFLDNAPTYLLFFELAGGDPKVLMSDLSGTLAAISMGAVYMGALTYIGNAPNFM VAAIANERGIQMPSFFGYMGRAAVVLLPLFLLLTLLPIHPLLSPH >Mature_444_residues TWPFALPFAGLLLSIALGPLLFAGFWHHHYGKIAAAWALVTLAALSWQAGLGAALASFVHALLAEYLSFIVLLFALYTVA GGILVTGDIRGTPTTNTSILALGTFIASVVGTTGAAMILVRPLIRANLGRPHNVHVLVFFIILAANVGGALSPLGDPPLF VGFLRGVDFFWTTRNIWLQTAIVAGLLLVIFAAIDGWRFRQEKPALRASRTTEPVRVRGLVNVVLIAAIVTNTLVSANWK PGIAFDIVGTHLELQNLVRDAVLLVIAGLSLWLTPDEHREANGFSWEPIREVAKLFAAIFTAIVPVIAMLNAGHDGSFGW LLNAVTTPAGAPREVAYFWFTGLMSAFLDNAPTYLLFFELAGGDPKVLMSDLSGTLAAISMGAVYMGALTYIGNAPNFMV AAIANERGIQMPSFFGYMGRAAVVLLPLFLLLTLLPIHPLLSPH
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47672; Mature: 47541
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWPFALPFAGLLLSIALGPLLFAGFWHHHYGKIAAAWALVTLAALSWQAGLGAALASFV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALLAEYLSFIVLLFALYTVAGGILVTGDIRGTPTTNTSILALGTFIASVVGTTGAAMIL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH VRPLIRANLGRPHNVHVLVFFIILAANVGGALSPLGDPPLFVGFLRGVDFFWTTRNIWLQ HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHEEEHHHHHHH TAIVAGLLLVIFAAIDGWRFRQEKPALRASRTTEPVRVRGLVNVVLIAAIVTNTLVSANW HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC KPGIAFDIVGTHLELQNLVRDAVLLVIAGLSLWLTPDEHREANGFSWEPIREVAKLFAAI CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHH FTAIVPVIAMLNAGHDGSFGWLLNAVTTPAGAPREVAYFWFTGLMSAFLDNAPTYLLFFE HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE LAGGDPKVLMSDLSGTLAAISMGAVYMGALTYIGNAPNFMVAAIANERGIQMPSFFGYMG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHH RAAVVLLPLFLLLTLLPIHPLLSPH HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TWPFALPFAGLLLSIALGPLLFAGFWHHHYGKIAAAWALVTLAALSWQAGLGAALASFV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALLAEYLSFIVLLFALYTVAGGILVTGDIRGTPTTNTSILALGTFIASVVGTTGAAMIL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH VRPLIRANLGRPHNVHVLVFFIILAANVGGALSPLGDPPLFVGFLRGVDFFWTTRNIWLQ HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHEEEHHHHHHH TAIVAGLLLVIFAAIDGWRFRQEKPALRASRTTEPVRVRGLVNVVLIAAIVTNTLVSANW HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC KPGIAFDIVGTHLELQNLVRDAVLLVIAGLSLWLTPDEHREANGFSWEPIREVAKLFAAI CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHH FTAIVPVIAMLNAGHDGSFGWLLNAVTTPAGAPREVAYFWFTGLMSAFLDNAPTYLLFFE HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE LAGGDPKVLMSDLSGTLAAISMGAVYMGALTYIGNAPNFMVAAIANERGIQMPSFFGYMG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHH RAAVVLLPLFLLLTLLPIHPLLSPH HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA