| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146338182
Identifier: 146338182
GI number: 146338182
Start: 1147306
End: 1148145
Strand: Reverse
Name: 146338182
Synonym: BRADO1080
Alternate gene names: NA
Gene position: 1148145-1147306 (Counterclockwise)
Preceding gene: 146338184
Following gene: 146338181
Centisome position: 15.4
GC content: 67.26
Gene sequence:
>840_bases ATGTCCGCCTTGGTTCCTCACCACTCCGCCACACTGTTGATCGCCGCAATGCTGTCGAGCTCGCTCGCGGTCGACGCGCG CGCGCAGGACTCCTCCCCCTGGCAGCGCGACAGCCACTCGGCCGTGCGCCTGCTCGCAGGCTCGCGCAGCGGCCCGGTGC TGCTCGGAGGCATCGCGATCCAGCTGCAGCCGGGTTGGAAGACCTATTGGCGGACGCCCGGCGATTCCGGCGTGCCGCCG CGGTTCGACTTCTCCAAGTCGGAGAACGTCGAAGCCGTGACGGTTCTGTGGCCGGCTCCGACCAAGTTCGACGACGGCGC GGGCGGCCATTCGCTCGGCTATCATGACCAGATCGTGCTGCCGCTGCGCATCGTCAGCAAGAGCGCGGACAAACCGATGA TCCTGCGCGCCGACATCAGCTACGCGGTGTGCGAGAAGATCTGCATTCCGGTGGACGCCAAGGCCGAGCTCGCCTTCACC AGCGTCGCCAGCACCGAGGACACCGCCCTGTCGGCGGCCCTCGATGCCGTGCCCAAGCCCGCCAATATCGGCGACCCCAA TCCGGTCACGATTCATGACGTCAAGCGCGACGGCAAGAAGGATGTCATCGTCGACGTGGCGGCGCCCGAGGGGCGCGGCG TTCATTTGTATGTCGAAGGACCGACGCCGGACTGGTCGCTGCCGATCCCGACCGCGCGCGACAGCGGCACGCCGGGAATC ACACGCTTCGCCTTCGAGCTCGACGGTGTGCCGCCGGGCGTGAAGCCCGATGGTGCAGCGCTGAAGTTCACGCTGGTCGG GCCGGACAAGGCCTACGAGTTCAACGTCAACCTGCCGTAA
Upstream 100 bases:
>100_bases GGGATGCGCATCTGTCAATCAAGGTTCAGGTCCCCGCAGCGAAAACTGCCTCACAAGCAATTCAATGGTTTGCGGCTGAA CAGCACACTAAAGACGTTTC
Downstream 100 bases:
>100_bases TCGCGCCTTCGGCGAGCCGGGGCTGGCGATCCAACCGATTCTTAACGATGCGTTGATAGGAAGCCCCATCGCCGCCAGCG CGCGGCCGTGGAGCCCGTGC
Product: putative signal peptide
Products: NA
Alternate protein names: Cytochrome C Biogenesis Protein Transmembrane Region; ThiolDisulfide Interchange Protein DsbD; Metal Resistance Protein; ThiolDisulfide Interchange; ThiolDisulfide Interchange Protein; Cytochrome C Biogenesis Transmembrane Protein; Protein-Disulfide Reductase; Signal Peptide; Thioredoxin DsbD Family; Thiol-Disulfide Interchange Protein-Like Protein; Signal Peptide Protein; ThioDisulfide Interchange Protein; Copper Sensitivity Suppressor Membrane Protein B; Thiol-Disulfide Interchange Protein DsbD-Like Protein; Lipoprotein; Copper-Sensitivity B Suppressor
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSALVPHHSATLLIAAMLSSSLAVDARAQDSSPWQRDSHSAVRLLAGSRSGPVLLGGIAIQLQPGWKTYWRTPGDSGVPP RFDFSKSENVEAVTVLWPAPTKFDDGAGGHSLGYHDQIVLPLRIVSKSADKPMILRADISYAVCEKICIPVDAKAELAFT SVASTEDTALSAALDAVPKPANIGDPNPVTIHDVKRDGKKDVIVDVAAPEGRGVHLYVEGPTPDWSLPIPTARDSGTPGI TRFAFELDGVPPGVKPDGAALKFTLVGPDKAYEFNVNLP
Sequences:
>Translated_279_residues MSALVPHHSATLLIAAMLSSSLAVDARAQDSSPWQRDSHSAVRLLAGSRSGPVLLGGIAIQLQPGWKTYWRTPGDSGVPP RFDFSKSENVEAVTVLWPAPTKFDDGAGGHSLGYHDQIVLPLRIVSKSADKPMILRADISYAVCEKICIPVDAKAELAFT SVASTEDTALSAALDAVPKPANIGDPNPVTIHDVKRDGKKDVIVDVAAPEGRGVHLYVEGPTPDWSLPIPTARDSGTPGI TRFAFELDGVPPGVKPDGAALKFTLVGPDKAYEFNVNLP >Mature_278_residues SALVPHHSATLLIAAMLSSSLAVDARAQDSSPWQRDSHSAVRLLAGSRSGPVLLGGIAIQLQPGWKTYWRTPGDSGVPPR FDFSKSENVEAVTVLWPAPTKFDDGAGGHSLGYHDQIVLPLRIVSKSADKPMILRADISYAVCEKICIPVDAKAELAFTS VASTEDTALSAALDAVPKPANIGDPNPVTIHDVKRDGKKDVIVDVAAPEGRGVHLYVEGPTPDWSLPIPTARDSGTPGIT RFAFELDGVPPGVKPDGAALKFTLVGPDKAYEFNVNLP
Specific function: Unknown
COG id: COG4233
COG function: function code OC; Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29540; Mature: 29409
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALVPHHSATLLIAAMLSSSLAVDARAQDSSPWQRDSHSAVRLLAGSRSGPVLLGGIAI CCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEE QLQPGWKTYWRTPGDSGVPPRFDFSKSENVEAVTVLWPAPTKFDDGAGGHSLGYHDQIVL EECCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEE PLRIVSKSADKPMILRADISYAVCEKICIPVDAKAELAFTSVASTEDTALSAALDAVPKP EEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCC ANIGDPNPVTIHDVKRDGKKDVIVDVAAPEGRGVHLYVEGPTPDWSLPIPTARDSGTPGI CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCE TRFAFELDGVPPGVKPDGAALKFTLVGPDKAYEFNVNLP EEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCC >Mature Secondary Structure SALVPHHSATLLIAAMLSSSLAVDARAQDSSPWQRDSHSAVRLLAGSRSGPVLLGGIAI CCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEE QLQPGWKTYWRTPGDSGVPPRFDFSKSENVEAVTVLWPAPTKFDDGAGGHSLGYHDQIVL EECCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEE PLRIVSKSADKPMILRADISYAVCEKICIPVDAKAELAFTSVASTEDTALSAALDAVPKP EEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCC ANIGDPNPVTIHDVKRDGKKDVIVDVAAPEGRGVHLYVEGPTPDWSLPIPTARDSGTPGI CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCE TRFAFELDGVPPGVKPDGAALKFTLVGPDKAYEFNVNLP EEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA