Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146338181

Identifier: 146338181

GI number: 146338181

Start: 1145828

End: 1147204

Strand: Reverse

Name: 146338181

Synonym: BRADO1079

Alternate gene names: NA

Gene position: 1147204-1145828 (Counterclockwise)

Preceding gene: 146338182

Following gene: 146338180

Centisome position: 15.39

GC content: 67.03

Gene sequence:

>1377_bases
GTGGCCGTGATGGACACCCGCAACGACCCCGTTTCCCCAGGCCTTCTCGCCCGGCTGAAGACACGGCTTGCCGCGCTTGG
CGGCAGCGGCGAGGCCTCGCTGACGCGGCGGCTGGCCGGCACCATCTTCCTCATCCGCGTGCTGAGCGCCGGCCTGGCCT
ATCTCAGCCAGATCCTGCTGGCGCGCTGGATGGGTGGCTCGGACTACGGCACCTACGTCTATGTCTGGACCTGGGTGCTG
CTGCTCGGCAGCATGCTCGATTTTGGCATCGCCTCGTCGGCGCAGAAGATCATCCCGGATTACCGCGCGGCGAACCAGCA
CGCGCTGCTGCGCGGCTTCCTGTCCGGCGGCCGCTGGCTCACGCTCGCCACGTCCGGCTGTGCGGCGCTGCTGCTGGCCG
GTCTCCTCGCCCTGCTGTCGCCGTGGATCGACGACAGCGAGCGCCTGCCACTGTACATCGGCTGTCTCACCCTGCCGGCC
TTCGTGGTCGCCAACACCCAGGACGGCATCGCGCGCTCGCATGACTGGATGGCGCTCGGCCTGATGCCGCAATTCATCAT
CCGGCAGACGCTGATCATCGGCTTCACCGCAGGCGCCTTCGTGCTCGGCTTCGATCTCGGCGCGACCGCGGCGATGGCCG
CGAGCGCCGCCGCCGTCTGGATCGCGATGCTCGGCCAGATGCTGGTGCTGAACAATCGGCTCGATCGCCATGTCGAGAGT
GGACCGAAGCAGTATGACCTCAGAGGCTGGCTCGCGATCTCGCTGCCGATCCTGCTGGTCGAGAGCTTCTATCTCCTGCT
GTCCTACACCGACGTGCTGGTGCTGCAGCAGTTCCGCTCATCGGAGGAGGTCGGCATCTATTTCGCGGTCGTGAAGACGC
TCGCGCTGGTGTCGTTCATCCATTACGCGATGTCGGCGACCACGGCGCATCGCTTCGCCGAGTATCACGCGCTCGGCGAC
AAGGCGCGGCTGTCGGCCTATGTCGCGCATGCGATCAAATGGACGTTCTGGCCGTCGCTGGCCGCGACCCTGGTGCTGCT
CGCGCTGGGCAAGCCGCTGCTATGGCTGTTCGGCGCGCAGTTCACGGCCGGATATGACATCATGTTCATCGCCGCGGTCG
GGCTCGTGGTCCGCGCGGCCATCGGTCCGGTGGAGCGGCTTCTCAACATGCTGGGCCAGCAGCGCGCCTGTGCTTCCGCT
TACGCGGCGGCGTTCGTCTTGAACCTCGTGCTCTGCATCCTGCTGGTGCCGCGCCTCGGCGGACACGGCGCCGCGGCCGC
AACCTCGCTATCGCTGGCGTTCGAGACCGTGCTTCTGTTCCGCATCGTCAAGCAGCGGCTGGGCTTGCACGTTCTCGCCT
TCGGCAAGGCGTCCTGA

Upstream 100 bases:

>100_bases
CGCGCCTTCGGCGAGCCGGGGCTGGCGATCCAACCGATTCTTAACGATGCGTTGATAGGAAGCCCCATCGCCGCCAGCGC
GCGGCCGTGGAGCCCGTGCC

Downstream 100 bases:

>100_bases
GGGAACCACGGTGACGTAACAGTTGCGTCATCTTGTCCTCCGCTTGACGGAACTAAGAGCGTCGCCCCGGCAAGGATTGC
CGTGCGCGACGATCACGCAA

Product: PST family polysaccharide export protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Associated Protein; Polysaccharide Export Related Protein; Polysaccharide Efflux Transporter; MatE Family; Exopolysaccharide Biosynthesis Protein; Lipopolysaccharide Biosynthesis Protein; Virulence Factor MVIN Family Protein; PST Family Polysaccharide Export Protein; Polysaccharide Biosynthesis Related Protein

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MAVMDTRNDPVSPGLLARLKTRLAALGGSGEASLTRRLAGTIFLIRVLSAGLAYLSQILLARWMGGSDYGTYVYVWTWVL
LLGSMLDFGIASSAQKIIPDYRAANQHALLRGFLSGGRWLTLATSGCAALLLAGLLALLSPWIDDSERLPLYIGCLTLPA
FVVANTQDGIARSHDWMALGLMPQFIIRQTLIIGFTAGAFVLGFDLGATAAMAASAAAVWIAMLGQMLVLNNRLDRHVES
GPKQYDLRGWLAISLPILLVESFYLLLSYTDVLVLQQFRSSEEVGIYFAVVKTLALVSFIHYAMSATTAHRFAEYHALGD
KARLSAYVAHAIKWTFWPSLAATLVLLALGKPLLWLFGAQFTAGYDIMFIAAVGLVVRAAIGPVERLLNMLGQQRACASA
YAAAFVLNLVLCILLVPRLGGHGAAAATSLSLAFETVLLFRIVKQRLGLHVLAFGKAS

Sequences:

>Translated_458_residues
MAVMDTRNDPVSPGLLARLKTRLAALGGSGEASLTRRLAGTIFLIRVLSAGLAYLSQILLARWMGGSDYGTYVYVWTWVL
LLGSMLDFGIASSAQKIIPDYRAANQHALLRGFLSGGRWLTLATSGCAALLLAGLLALLSPWIDDSERLPLYIGCLTLPA
FVVANTQDGIARSHDWMALGLMPQFIIRQTLIIGFTAGAFVLGFDLGATAAMAASAAAVWIAMLGQMLVLNNRLDRHVES
GPKQYDLRGWLAISLPILLVESFYLLLSYTDVLVLQQFRSSEEVGIYFAVVKTLALVSFIHYAMSATTAHRFAEYHALGD
KARLSAYVAHAIKWTFWPSLAATLVLLALGKPLLWLFGAQFTAGYDIMFIAAVGLVVRAAIGPVERLLNMLGQQRACASA
YAAAFVLNLVLCILLVPRLGGHGAAAATSLSLAFETVLLFRIVKQRLGLHVLAFGKAS
>Mature_457_residues
AVMDTRNDPVSPGLLARLKTRLAALGGSGEASLTRRLAGTIFLIRVLSAGLAYLSQILLARWMGGSDYGTYVYVWTWVLL
LGSMLDFGIASSAQKIIPDYRAANQHALLRGFLSGGRWLTLATSGCAALLLAGLLALLSPWIDDSERLPLYIGCLTLPAF
VVANTQDGIARSHDWMALGLMPQFIIRQTLIIGFTAGAFVLGFDLGATAAMAASAAAVWIAMLGQMLVLNNRLDRHVESG
PKQYDLRGWLAISLPILLVESFYLLLSYTDVLVLQQFRSSEEVGIYFAVVKTLALVSFIHYAMSATTAHRFAEYHALGDK
ARLSAYVAHAIKWTFWPSLAATLVLLALGKPLLWLFGAQFTAGYDIMFIAAVGLVVRAAIGPVERLLNMLGQQRACASAY
AAAFVLNLVLCILLVPRLGGHGAAAATSLSLAFETVLLFRIVKQRLGLHVLAFGKAS

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49391; Mature: 49260

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVMDTRNDPVSPGLLARLKTRLAALGGSGEASLTRRLAGTIFLIRVLSAGLAYLSQILL
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARWMGGSDYGTYVYVWTWVLLLGSMLDFGIASSAQKIIPDYRAANQHALLRGFLSGGRWL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCCCHHHHHHHHHCCCCEE
TLATSGCAALLLAGLLALLSPWIDDSERLPLYIGCLTLPAFVVANTQDGIARSHDWMALG
EEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHEECCCCCCCCCCCCEEEH
LMPQFIIRQTLIIGFTAGAFVLGFDLGATAAMAASAAAVWIAMLGQMLVLNNRLDRHVES
HHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GPKQYDLRGWLAISLPILLVESFYLLLSYTDVLVLQQFRSSEEVGIYFAVVKTLALVSFI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
HYAMSATTAHRFAEYHALGDKARLSAYVAHAIKWTFWPSLAATLVLLALGKPLLWLFGAQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH
FTAGYDIMFIAAVGLVVRAAIGPVERLLNMLGQQRACASAYAAAFVLNLVLCILLVPRLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GHGAAAATSLSLAFETVLLFRIVKQRLGLHVLAFGKAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC
>Mature Secondary Structure 
AVMDTRNDPVSPGLLARLKTRLAALGGSGEASLTRRLAGTIFLIRVLSAGLAYLSQILL
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARWMGGSDYGTYVYVWTWVLLLGSMLDFGIASSAQKIIPDYRAANQHALLRGFLSGGRWL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCCCHHHHHHHHHCCCCEE
TLATSGCAALLLAGLLALLSPWIDDSERLPLYIGCLTLPAFVVANTQDGIARSHDWMALG
EEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHEECCCCCCCCCCCCEEEH
LMPQFIIRQTLIIGFTAGAFVLGFDLGATAAMAASAAAVWIAMLGQMLVLNNRLDRHVES
HHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GPKQYDLRGWLAISLPILLVESFYLLLSYTDVLVLQQFRSSEEVGIYFAVVKTLALVSFI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
HYAMSATTAHRFAEYHALGDKARLSAYVAHAIKWTFWPSLAATLVLLALGKPLLWLFGAQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH
FTAGYDIMFIAAVGLVVRAAIGPVERLLNMLGQQRACASAYAAAFVLNLVLCILLVPRLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GHGAAAATSLSLAFETVLLFRIVKQRLGLHVLAFGKAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA