| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is sbp [H]
Identifier: 146338172
GI number: 146338172
Start: 1137617
End: 1138582
Strand: Direct
Name: sbp [H]
Synonym: BRADO1070
Alternate gene names: 146338172
Gene position: 1137617-1138582 (Clockwise)
Preceding gene: 146338171
Following gene: 146338173
Centisome position: 15.26
GC content: 63.04
Gene sequence:
>966_bases GTGGCGGGCCTGGCATGGGCGGGATCGGCCTATGCGGCGGACGTCAATCTGCTCAACGTGTCCTACGATCCGACCCGTGA GCTCTATGTCGAGTTCAACAAGGCGTTCGCCGCGAGCTACCAGAAGGAGACCGGCAAGAGCGTCGAGATCAAGCAGTCGC ATGGCGGCTCCGGCGCGCAGGCGCGCAGCGTGATCGACGGCCTGCAGGCCGACGTCGTCACCCTGGCGCTCGCCTATGAC ATCGACGCCATCGCCAACAAGGGGCTGCTCGACAAGGAGTGGCAGAAGCGGCTGCCGCAGAACGCCTCGCCTTACACCTC GACCATCGTGTTCCTGGTCCGCAAGGGCAACCCGAAGGGCATCAAGGATTGGGACGACCTGCTCAAGTCGGGCGTCGACG TGATCACGCCCAATCCGAAGACCTCCGGCGGCGCCCGCTGGAACTATCTCGCCGCCTGGGGCTATGCGCTGAAGAAGGCC GGCTCGGCCGATAAGGCCAAGCAGTTCGTGGCCGATCTCTACAAGCACGTTCCGGTGCTCGACACCGGCGCCCGCGGCGC GACCGTCACCTTCGTGGAACGCGGCGTGGGCGACGTCCTGCTCGCCTGGGAAAACGAGGCCTATCTGGCCTTGAAGGAAT TCGGTAAGGAAAAGTTCGAGATCATCTCGCCGTCGCTGTCGATCCTGGCAGAACCGCCAGTCGCCGTCGTCGACACGGTC GTGGCCAAGAAGGGGACCCAGGCGGCCGCCGAGGCCTATCTGAAGTACTGGTATACGAAGGACGGTCAGGAAATCGCCGC ACGCAACTTCTATCGTCCGCGTGATGCCGACGTCGCCAAGAAGTATGCCGAGTCGTTCGCCAAGGTCGATTTGTTCACCA TCGACGACGTGTTCGGCGGCTGGACCAAGGCGCAGAAGGAACACTTCGGCGAAGGTGGCGTGTTCGATCAGATCTACAAG AACTGA
Upstream 100 bases:
>100_bases GTTGACTCTGACGTGCACATCCGGCGATCTGCAGGAGACGCCTGCACCATCGCGGGCCTGGAAATGGAGAGCTTCGATGA TGCGACGTGTTCTGGCTGTC
Downstream 100 bases:
>100_bases TGACGAGCAGGAAGTAGGGACATCGGAATGAGCCAGGTGGCGTCTTGAGCGTCCTTGCACCGCGACGCAGCACCTTGCCG GGCTTCGGTCTCACCATGGG
Product: sulfate ABC transporter periplasmic substrate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MAGLAWAGSAYAADVNLLNVSYDPTRELYVEFNKAFAASYQKETGKSVEIKQSHGGSGAQARSVIDGLQADVVTLALAYD IDAIANKGLLDKEWQKRLPQNASPYTSTIVFLVRKGNPKGIKDWDDLLKSGVDVITPNPKTSGGARWNYLAAWGYALKKA GSADKAKQFVADLYKHVPVLDTGARGATVTFVERGVGDVLLAWENEAYLALKEFGKEKFEIISPSLSILAEPPVAVVDTV VAKKGTQAAAEAYLKYWYTKDGQEIAARNFYRPRDADVAKKYAESFAKVDLFTIDDVFGGWTKAQKEHFGEGGVFDQIYK N
Sequences:
>Translated_321_residues MAGLAWAGSAYAADVNLLNVSYDPTRELYVEFNKAFAASYQKETGKSVEIKQSHGGSGAQARSVIDGLQADVVTLALAYD IDAIANKGLLDKEWQKRLPQNASPYTSTIVFLVRKGNPKGIKDWDDLLKSGVDVITPNPKTSGGARWNYLAAWGYALKKA GSADKAKQFVADLYKHVPVLDTGARGATVTFVERGVGDVLLAWENEAYLALKEFGKEKFEIISPSLSILAEPPVAVVDTV VAKKGTQAAAEAYLKYWYTKDGQEIAARNFYRPRDADVAKKYAESFAKVDLFTIDDVFGGWTKAQKEHFGEGGVFDQIYK N >Mature_320_residues AGLAWAGSAYAADVNLLNVSYDPTRELYVEFNKAFAASYQKETGKSVEIKQSHGGSGAQARSVIDGLQADVVTLALAYDI DAIANKGLLDKEWQKRLPQNASPYTSTIVFLVRKGNPKGIKDWDDLLKSGVDVITPNPKTSGGARWNYLAAWGYALKKAG SADKAKQFVADLYKHVPVLDTGARGATVTFVERGVGDVLLAWENEAYLALKEFGKEKFEIISPSLSILAEPPVAVVDTVV AKKGTQAAAEAYLKYWYTKDGQEIAARNFYRPRDADVAKKYAESFAKVDLFTIDDVFGGWTKAQKEHFGEGGVFDQIYKN
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=315, Percent_Identity=70.4761904761905, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1788765, Length=305, Percent_Identity=46.8852459016393, Blast_Score=279, Evalue=2e-76,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 35111; Mature: 34980
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLAWAGSAYAADVNLLNVSYDPTRELYVEFNKAFAASYQKETGKSVEIKQSHGGSGAQ CCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH ARSVIDGLQADVVTLALAYDIDAIANKGLLDKEWQKRLPQNASPYTSTIVFLVRKGNPKG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCC IKDWDDLLKSGVDVITPNPKTSGGARWNYLAAWGYALKKAGSADKAKQFVADLYKHVPVL CCHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCE DTGARGATVTFVERGVGDVLLAWENEAYLALKEFGKEKFEIISPSLSILAEPPVAVVDTV ECCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHCCHHHHHCCCCHHHHCCCCHHHHHHH VAKKGTQAAAEAYLKYWYTKDGQEIAARNFYRPRDADVAKKYAESFAKVDLFTIDDVFGG HHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEHHHHCC WTKAQKEHFGEGGVFDQIYKN HHHHHHHHCCCCCCHHHHHCC >Mature Secondary Structure AGLAWAGSAYAADVNLLNVSYDPTRELYVEFNKAFAASYQKETGKSVEIKQSHGGSGAQ CCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH ARSVIDGLQADVVTLALAYDIDAIANKGLLDKEWQKRLPQNASPYTSTIVFLVRKGNPKG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCC IKDWDDLLKSGVDVITPNPKTSGGARWNYLAAWGYALKKAGSADKAKQFVADLYKHVPVL CCHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCE DTGARGATVTFVERGVGDVLLAWENEAYLALKEFGKEKFEIISPSLSILAEPPVAVVDTV ECCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHCCHHHHHCCCCHHHHCCCCHHHHHHH VAKKGTQAAAEAYLKYWYTKDGQEIAARNFYRPRDADVAKKYAESFAKVDLFTIDDVFGG HHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEHHHHCC WTKAQKEHFGEGGVFDQIYKN HHHHHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]