| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cysT [H]
Identifier: 146338173
GI number: 146338173
Start: 1138627
End: 1139460
Strand: Direct
Name: cysT [H]
Synonym: BRADO1071
Alternate gene names: 146338173
Gene position: 1138627-1139460 (Clockwise)
Preceding gene: 146338172
Following gene: 146338174
Centisome position: 15.27
GC content: 67.15
Gene sequence:
>834_bases TTGAGCGTCCTTGCACCGCGACGCAGCACCTTGCCGGGCTTCGGTCTCACCATGGGACTGACGCTGACCTGGCTGTCCCT GATCGTCCTCATTCCCCTGGCCGGGCTGTTCGTCCGCTCGACGGATCTCAGCCTGGCGCAGTTCTGGGACATCGTCACCA GCCGGCGCACCCTGAGCGCGCTCAAGATCTCGTTCGGGCTGTCGTTCGCGGCGGCGCTCGTCAATCTGGTGATGGGCACC ATCGTCGTCTGGGCGCTGGTGCGCTACCGCTTCCCCGGCCGGCGGCTGTTCGATGCCATCGTCGACGTGCCGTTCGCGCT GCCGACCGCGGTTGCCGGCGTGGCGCTGACCGCGCTGTTCGCGCAGAAGGGCTGGCTCGGCGCGCCGCTGGCGGCGGCCG GCATCAGGGTGGCGTTCACGCCGCTCGGCATCTTCATCGCGATGATCTTCATCGGCATCCCCTTCGTGGTCCGCACCGTG CAGCCGGTGCTGATCGATCTCGATCCCGAGATCGAGGAAGCGGCGGCGAGCCTCGGCGCCAGCCGTTGGCACATCGTCAC CAAGGTCATCCTGCCGAGCCTGACACCGGCGCTGCTGACCGGCTTCGCGCTCGCCTTTGCCCGGGCCGTCGGCGAGTACG GCTCGGTGATCTTCATCGCCGGCAATCTCCCGAATGTCTCCGAGATCGCCCCCCTCCTGATCGTGATCCGCCTGTCCGAG TTCCGCTATGCCGACGCCACGGCCATTGCAGTGGTGATGCTTGTGGTGGCATTCGTGATCATCTTCGCGGTGAATCGCCT GCAGCGCTGGGCTCAGACCCAGGCGTCCACCTGA
Upstream 100 bases:
>100_bases CGCAGAAGGAACACTTCGGCGAAGGTGGCGTGTTCGATCAGATCTACAAGAACTGATGACGAGCAGGAAGTAGGGACATC GGAATGAGCCAGGTGGCGTC
Downstream 100 bases:
>100_bases GGCCGCGACATGAGCATCGAGATGACCCTGCAACGGACGCCGGATGCCTCGGCGCGCAGCCTGGCCGAAAGCGCCGCCCG ACGCGATCCGCGCGCCGAGC
Product: sulfate/thiosulfate ABC transporter membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSVLAPRRSTLPGFGLTMGLTLTWLSLIVLIPLAGLFVRSTDLSLAQFWDIVTSRRTLSALKISFGLSFAAALVNLVMGT IVVWALVRYRFPGRRLFDAIVDVPFALPTAVAGVALTALFAQKGWLGAPLAAAGIRVAFTPLGIFIAMIFIGIPFVVRTV QPVLIDLDPEIEEAAASLGASRWHIVTKVILPSLTPALLTGFALAFARAVGEYGSVIFIAGNLPNVSEIAPLLIVIRLSE FRYADATAIAVVMLVVAFVIIFAVNRLQRWAQTQAST
Sequences:
>Translated_277_residues MSVLAPRRSTLPGFGLTMGLTLTWLSLIVLIPLAGLFVRSTDLSLAQFWDIVTSRRTLSALKISFGLSFAAALVNLVMGT IVVWALVRYRFPGRRLFDAIVDVPFALPTAVAGVALTALFAQKGWLGAPLAAAGIRVAFTPLGIFIAMIFIGIPFVVRTV QPVLIDLDPEIEEAAASLGASRWHIVTKVILPSLTPALLTGFALAFARAVGEYGSVIFIAGNLPNVSEIAPLLIVIRLSE FRYADATAIAVVMLVVAFVIIFAVNRLQRWAQTQAST >Mature_276_residues SVLAPRRSTLPGFGLTMGLTLTWLSLIVLIPLAGLFVRSTDLSLAQFWDIVTSRRTLSALKISFGLSFAAALVNLVMGTI VVWALVRYRFPGRRLFDAIVDVPFALPTAVAGVALTALFAQKGWLGAPLAAAGIRVAFTPLGIFIAMIFIGIPFVVRTVQ PVLIDLDPEIEEAAASLGASRWHIVTKVILPSLTPALLTGFALAFARAVGEYGSVIFIAGNLPNVSEIAPLLIVIRLSEF RYADATAIAVVMLVVAFVIIFAVNRLQRWAQTQAST
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=261, Percent_Identity=49.8084291187739, Blast_Score=235, Evalue=2e-63, Organism=Escherichia coli, GI87082099, Length=251, Percent_Identity=30.2788844621514, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1786980, Length=174, Percent_Identity=34.4827586206897, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786254, Length=212, Percent_Identity=26.8867924528302, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787368, Length=209, Percent_Identity=30.622009569378, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787369, Length=155, Percent_Identity=29.0322580645161, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29703; Mature: 29572
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLAPRRSTLPGFGLTMGLTLTWLSLIVLIPLAGLFVRSTDLSLAQFWDIVTSRRTLSA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LKISFGLSFAAALVNLVMGTIVVWALVRYRFPGRRLFDAIVDVPFALPTAVAGVALTALF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH AQKGWLGAPLAAAGIRVAFTPLGIFIAMIFIGIPFVVRTVQPVLIDLDPEIEEAAASLGA HHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCC SRWHIVTKVILPSLTPALLTGFALAFARAVGEYGSVIFIAGNLPNVSEIAPLLIVIRLSE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH FRYADATAIAVVMLVVAFVIIFAVNRLQRWAQTQAST CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVLAPRRSTLPGFGLTMGLTLTWLSLIVLIPLAGLFVRSTDLSLAQFWDIVTSRRTLSA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LKISFGLSFAAALVNLVMGTIVVWALVRYRFPGRRLFDAIVDVPFALPTAVAGVALTALF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH AQKGWLGAPLAAAGIRVAFTPLGIFIAMIFIGIPFVVRTVQPVLIDLDPEIEEAAASLGA HHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCC SRWHIVTKVILPSLTPALLTGFALAFARAVGEYGSVIFIAGNLPNVSEIAPLLIVIRLSE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH FRYADATAIAVVMLVVAFVIIFAVNRLQRWAQTQAST CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]