| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337977
Identifier: 146337977
GI number: 146337977
Start: 921772
End: 922962
Strand: Reverse
Name: 146337977
Synonym: BRADO0869
Alternate gene names: NA
Gene position: 922962-921772 (Counterclockwise)
Preceding gene: 146337979
Following gene: 146337976
Centisome position: 12.38
GC content: 70.03
Gene sequence:
>1191_bases ATGATAGACGCGAAAGACGCATCGGCGCCAGCGCCGCCGCTGTGGCCTGCCGTCGCTGCGATGACGGCGCTGCAGGCGCT GGTGTCGCTGGCGCTATTCGCGCCGGGGATCGTGGCGCCACGCGCCGGCTTGAGCATCGAGCAATTGTCGCTGTTTTCGA CCGCGGCCTTCGGCATCAGCCTGGCGTCCTCATTCTGGGGCGGCACTCTGGTGCAGAAGGTCGGCTCGCTGCGCGTGGCC GCGCTGTGCGCAGGAGCGGTCTGCGCCGGCATGTCGCTGGCGCTGGTCGAAACGGGCTGGGCGCTGCTTGCCGCCGGGCT GACGCTGGGGCTCGCGGTCGGACCGGAGACCCCCGCAAGCTCCGCACTGCTCGGCCGTCTGGTGCCTGCCGACAAGCGCG CGATGGTGTTCTCGATCCGGCAGACCGGCAGCCAGATCGGAGCTGTGGTCGGCTCGCTGCTGCTGCCGCCGATCGCCGTC ATGCTGGCGCCGAGCTCGGCCTATGCGACAGTGATCGTATGCGCCGCCGTCGCCTTCGCGAGCTTCGAGCGGCTCCGCCC GACCTATGCCATCGCGCCTCCGGACATGCCGCGCCTCGGGCTTGCCGACCGGCTGCAGCTGATCAGCGCCGACCGCCGCA TGGCGGCGCTTGCGCTTGCCTCGATCCCGTTCAGCGGCATGCAGGTGATCCTCAACACCTGCTTCGTGAGCTTCGGCACG TCGGAGCTCGCGCTCGGTCACGTCGAGGCGGGCTGGGTGCTGGCAACGGCGCAAGGCGCGGGCCTCGTTGGCCGGCTCGG CTGGGGCGCGGTAGCGACGCGGCTGCGCTCCGCGCGCGCCGTGTTGGTGATGGCCGGCGCGGGAATGGCGATCTGCGCGC TCCTGATAGGCCTATGGGGTCCGCTGATGACCCGTCCGATCCTCATTTTTCTCACCTTCGCGTTCGGGCTGACGGCGAGT GGCTGGAACGGCGTGTTCATCGCCGAGATCGCCAATCTGGCCAAGCCCGGACGTGTTGCGGAAGCCACCGGCGCGGTGCT CACGGCTTCGTTTCTCGGCCTCGTCGCCGCGCCACTGCTGGTCGCGCTGCTCACTCCCCGTGTCGGGCTGGGCGGCAGCT TCGTCGCCCTTGGACTGATGGCGGCCGCCGGAGCGGCCGTTCTCCTGATGGAGCGTTTTGATGCGCGCTGA
Upstream 100 bases:
>100_bases GCCACGCGCAGTCCCAAGGCCGGACGTCCGTTCGCGACATCGACTGCATGAACCGAGATCCCACCGGCCATTCCGCTCTC CGCCTTCAGGTTGCCGCGGC
Downstream 100 bases:
>100_bases TGAGATCGCAGGGACCGTCCTGGCAAGGCAGAGATCGGCACGGGAAATGGCCGAGCGGGCGCTGACGCGCATCGATGCGG CGCGCGCGCTCAACGCCGTC
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Facilitator Superfamily Protein; MFS Permease
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MIDAKDASAPAPPLWPAVAAMTALQALVSLALFAPGIVAPRAGLSIEQLSLFSTAAFGISLASSFWGGTLVQKVGSLRVA ALCAGAVCAGMSLALVETGWALLAAGLTLGLAVGPETPASSALLGRLVPADKRAMVFSIRQTGSQIGAVVGSLLLPPIAV MLAPSSAYATVIVCAAVAFASFERLRPTYAIAPPDMPRLGLADRLQLISADRRMAALALASIPFSGMQVILNTCFVSFGT SELALGHVEAGWVLATAQGAGLVGRLGWGAVATRLRSARAVLVMAGAGMAICALLIGLWGPLMTRPILIFLTFAFGLTAS GWNGVFIAEIANLAKPGRVAEATGAVLTASFLGLVAAPLLVALLTPRVGLGGSFVALGLMAAAGAAVLLMERFDAR
Sequences:
>Translated_396_residues MIDAKDASAPAPPLWPAVAAMTALQALVSLALFAPGIVAPRAGLSIEQLSLFSTAAFGISLASSFWGGTLVQKVGSLRVA ALCAGAVCAGMSLALVETGWALLAAGLTLGLAVGPETPASSALLGRLVPADKRAMVFSIRQTGSQIGAVVGSLLLPPIAV MLAPSSAYATVIVCAAVAFASFERLRPTYAIAPPDMPRLGLADRLQLISADRRMAALALASIPFSGMQVILNTCFVSFGT SELALGHVEAGWVLATAQGAGLVGRLGWGAVATRLRSARAVLVMAGAGMAICALLIGLWGPLMTRPILIFLTFAFGLTAS GWNGVFIAEIANLAKPGRVAEATGAVLTASFLGLVAAPLLVALLTPRVGLGGSFVALGLMAAAGAAVLLMERFDAR >Mature_396_residues MIDAKDASAPAPPLWPAVAAMTALQALVSLALFAPGIVAPRAGLSIEQLSLFSTAAFGISLASSFWGGTLVQKVGSLRVA ALCAGAVCAGMSLALVETGWALLAAGLTLGLAVGPETPASSALLGRLVPADKRAMVFSIRQTGSQIGAVVGSLLLPPIAV MLAPSSAYATVIVCAAVAFASFERLRPTYAIAPPDMPRLGLADRLQLISADRRMAALALASIPFSGMQVILNTCFVSFGT SELALGHVEAGWVLATAQGAGLVGRLGWGAVATRLRSARAVLVMAGAGMAICALLIGLWGPLMTRPILIFLTFAFGLTAS GWNGVFIAEIANLAKPGRVAEATGAVLTASFLGLVAAPLLVALLTPRVGLGGSFVALGLMAAAGAAVLLMERFDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40054; Mature: 40054
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDAKDASAPAPPLWPAVAAMTALQALVSLALFAPGIVAPRAGLSIEQLSLFSTAAFGIS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LASSFWGGTLVQKVGSLRVAALCAGAVCAGMSLALVETGWALLAAGLTLGLAVGPETPAS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCH SALLGRLVPADKRAMVFSIRQTGSQIGAVVGSLLLPPIAVMLAPSSAYATVIVCAAVAFA HHHHHHCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SFERLRPTYAIAPPDMPRLGLADRLQLISADRRMAALALASIPFSGMQVILNTCFVSFGT HHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC SELALGHVEAGWVLATAQGAGLVGRLGWGAVATRLRSARAVLVMAGAGMAICALLIGLWG CHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHH PLMTRPILIFLTFAFGLTASGWNGVFIAEIANLAKPGRVAEATGAVLTASFLGLVAAPLL HHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VALLTPRVGLGGSFVALGLMAAAGAAVLLMERFDAR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIDAKDASAPAPPLWPAVAAMTALQALVSLALFAPGIVAPRAGLSIEQLSLFSTAAFGIS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LASSFWGGTLVQKVGSLRVAALCAGAVCAGMSLALVETGWALLAAGLTLGLAVGPETPAS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCH SALLGRLVPADKRAMVFSIRQTGSQIGAVVGSLLLPPIAVMLAPSSAYATVIVCAAVAFA HHHHHHCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SFERLRPTYAIAPPDMPRLGLADRLQLISADRRMAALALASIPFSGMQVILNTCFVSFGT HHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC SELALGHVEAGWVLATAQGAGLVGRLGWGAVATRLRSARAVLVMAGAGMAICALLIGLWG CHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHH PLMTRPILIFLTFAFGLTASGWNGVFIAEIANLAKPGRVAEATGAVLTASFLGLVAAPLL HHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VALLTPRVGLGGSFVALGLMAAAGAAVLLMERFDAR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA